Lmin021206.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- ZNF236_1
- Assembly
- GCA_963082975.1
- Location
- OY720347.1:38911554-38928948[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.0014 0.22 13.1 5.9 1 23 194 216 194 216 0.98 2 27 0.007 1.1 10.9 1.7 1 23 222 244 222 244 0.97 3 27 2.3e-06 0.00036 21.9 0.3 2 23 250 271 249 271 0.96 4 27 0.35 56 5.5 0.1 3 23 279 299 278 299 0.94 5 27 0.00011 0.017 16.6 0.7 1 23 309 331 309 331 0.98 6 27 4.1e-05 0.0064 17.9 3.8 1 23 354 376 354 376 0.98 7 27 1.4e-06 0.00022 22.5 1.0 1 23 382 404 382 404 0.98 8 27 0.00012 0.019 16.5 0.1 1 23 410 433 410 433 0.96 9 27 0.00025 0.039 15.5 1.6 1 23 443 466 443 466 0.97 10 27 5.2e-06 0.00081 20.8 2.4 1 23 595 617 595 617 0.98 11 27 2.9e-05 0.0045 18.4 4.8 1 23 623 645 623 645 0.99 12 27 2.1e-05 0.0032 18.9 0.7 1 23 651 673 651 673 0.97 13 27 2.7e-05 0.0043 18.5 0.9 1 23 679 701 679 701 0.98 14 27 0.035 5.5 8.7 1.7 1 23 764 786 764 786 0.98 15 27 0.01 1.6 10.4 3.9 1 23 792 814 792 814 0.97 16 27 8.1e-05 0.013 17.0 1.9 1 23 820 842 820 842 0.98 17 27 0.0012 0.19 13.3 1.7 1 23 848 870 848 870 0.96 18 27 0.0042 0.66 11.6 8.8 2 23 1163 1184 1162 1184 0.97 19 27 0.0011 0.18 13.4 1.5 1 23 1190 1212 1190 1212 0.98 20 27 9.2e-06 0.0014 20.0 1.4 1 23 1218 1240 1218 1240 0.98 21 27 7.2e-08 1.1e-05 26.6 2.0 1 23 1327 1349 1327 1349 0.98 22 27 0.014 2.2 10.0 4.0 1 23 1355 1377 1355 1377 0.98 23 27 1.6e-05 0.0025 19.2 1.0 1 23 1383 1405 1383 1405 0.98 24 27 0.00077 0.12 13.9 4.1 1 23 1411 1433 1411 1433 0.99 25 27 7.1e-05 0.011 17.2 0.5 2 23 1601 1622 1601 1622 0.92 26 27 3.5e-06 0.00055 21.3 2.5 1 23 1628 1650 1628 1650 0.98 27 27 0.00025 0.039 15.5 3.4 1 23 1656 1679 1656 1679 0.97
Sequence Information
- Coding Sequence
- atggaAGAATTAACTATTGATAGTCCATCCCTAGTGGTTACACTTAATTCAGATTCTCTTATACCTAACAATACTTTTGTTTTGAGTGGAGATAACTCTAATCTCTTTACATCATcagATCCATCAAGTGATCCTAATTCATATATTACACTACCTTTACAActtattcaaaatattgatCTTAATTCAACGTCTCAAAATGTATTACTAAAAAACTTTGCTAATAATACCGTTTTAATTGACTCATCtcagctTGCCCTTCtatcaaatcaattaataattggaaACCAGGTTGGAACTTCTGTTGCATTCcaacaacaaaatgaaaaatcttTAGATATAGATCCTATAACTTATGGTcttaatattgaagaaatagattttgaagaaattaatcctacattaaaaaataatgggaATAATCAAGAAAATGAGACATTGAGAGATAAAGAATCAATTTCTAATGACGTTAATGACgcgaatttcaaagaaaatacagaagaaaattttgaaaagaccAAAGATTTAGAAAAATCATTAAGAGACCCTTCTATACAACCACCAATAGGaaagggtCCATTTAAATGTCGTATATGCTTTAAAGAGTTTATTAAATggaatcattataataaacatatgaAATTTCATTTGGATGATAAGCCATTTTCATGTACAAAATGTTCttgttcttttaatataaagGCTAATTTGATATTGCATGAAGCAACTCATAATTCTGAAGATCTACGATGTCCAGAATGCAATAGAAAATTTACAAGAAAAGCAGGATTGAAAGCTCATATAATGCTACATCAACGAGATGAAACAGTGTTTTGCGGAGAATGTGGAGATGAATTTGTAACattggcACAATTAGAGGAACATAAATTTCAACATAGTGAAGAGATAATTTGGACTGGAATTTATGAATGTAAAGAATGCcttcttcaatttaaaaaagctaGTGATTTGAGAGATCACATGAAAGAACATTAtaagttTAAAGCGTCTCTCTGTCATAAGAGTCATAAGAAGAACATAGACCGGAGTAATTTTGTTCATAAATGTTATACCTGTTCCAAAACTTTTCAAAAACCTAGCCAACTATTAAGACATATTCGAATACACACAGGAGAGAGACCTTTTAAATGTAATTTATGTGATAGAGCTTTCAACCAAAAAGGATCTTTACAGATCCATATGTCAAAACATAATGGAAATCGACCATATAAATGTGAATTCTGCGCAGCAGCTTTTAGTCAGaaagggAATCTTCGAGCTCATATTGTTCGAGTTCATCCTATACCATTTAAAGGCGAAGAAACATTTAAATGTTCTGAATGTCCttgtgtatttaaaaaattaggtacTTTAAATGCACATTTAAGCAGAATGCATAgaggagaaaataaaattatggcAATCGACGAATCTCTTGATCCCAACaagtattttcaatttcatgtaGATGCTGTAATGAGAGGTCTTGCGGAATTAGAAAATGCTGCATCATTTTCTAAAGAAGATAATTTTAGTCAAAATAATCCAGTTTCAAATTTAACAGAGGAAGTGGATGGAAATATTTTAGAACAGGCAATTGCTAATGCTCAATGCTTGGATACGAAAGAGATGAATTTACCAAACAATGaagttaaaaataaaccaaaggaaaaagaaaataaaaatgatcaaaCAAGCATAATCACTTTGGTTGATAAATTTTTGGATGGCAGTGCCCGtaaatatgtCATTCGTCAGAGACGAGTTGGGAAACTTCGTTGGCATCAATGTTCTTTTTGTaccaaagaatttaaaaaaccttCAGATCTTGTTCGTCACATTCGTATTCACACCAGAGAAAAACCTTTCAaatgTAATTATTGTTTTCGACATTTTGCTGTAAAATCTACTCTAACATCTCATATTCGAACACATACTGGAGTCAAACAACATATCTGTCAAATTTGTGGAAAAGGTTTATCGTCTTCAGGAAGTCTCAAACTTCATTTACGCACTCATAATGATTTATTTCCTTTTGAATGTGGGGAATGTGGTAAAAATTTTCGAAAAgaaaatcttttgaaaattcATAAACAAACTCATAAAGATGAATCTACAAATGATTCAGAGAATAATTCTAAGcgaattagaaaaaaagctCTTGATATTAAAACTGTGGATAAAGTTGTTTTAGAAGAACCTCTTGTTATTACTGATAatggGTTAGTATTACCTTTACCAAGAAATAGTCTTTTACTCAGACCTGAACAATCTGGTATCAACAgaccttttaaatgtaatgtttgtcttgCTACTTTTCTGAAGATTTCTCATTTAAAACAGCATATATTAATGCATACTGGTGAACGTCCTTTTCCTTGTCCTCATTGTCAAAaACGATTTATATCAAAAGGAGTTTTAAAATGCCATCTTTCAACTCACACTGCAACTCGAGCATATAAATGCTTAGATTGTCGTAAGGAATTTACAACAATGGGAAGCTTAAAACGCCATCGAGATTCTCATAGTGATAAACGACCTTATCTCTGTCCGTATTGCGCAAAAACTTTCAAATCTGCTGTCGCCTGTAGAAAACATATGAAAATCCATAGATATGAACTTGCTCTTCGTcagACAAAGCCAACTGAAGATTCCTTAGAAAATCAGACAGAACAAATTCCTGTAGTTGAAGATTCAAATAATCCATATTTAGATATCACTCCAGAATTAGCTCAGGTCTTGGTTGATAATGGCTTTCATGTATCAAGAGAAATTTCTGGCGAAAAAATTGATGACCTACAAGTTTCGGCTGAAACCGCTCAAGAAATTGAACAAGTAGATTTCAATACAGCAgaacATATTCCTGCTATTACTGTTGAAGAACATATTCCAGGTGTCATTCCTTCAGTAGTTCCTTCTGAAACCAATCTTAATTTAAACACTTTTTCAACTGAACCCAATTTACCTGAattttcagGTACGCTTTTGGAAAGTCAAACtatttctgaaaataataatgaaactaTTGAAGATTCATCAGAAACCGATCCATCTTCTAGATTACCAGTTAAACTTGATCTAAATAACCGAGTAGAACTGACACAGGAATCATCTAATCCATCAGTTTATGAACATTCATGTTTTGATTCTACTGTCTTTTCCATGACAATACCTAGTGATCAACTTGATATTGAAGGTTTATCTAATTCGACTTCAGGAATATCAACAATACTTTCTCAAGCAACCACTACAAATCCTAATACAGAAATTCTTGAGGATTTACCTGTTTCTCCGAATAATATAAATCTTGAAGGAATGGTTGAAGTTACTATATCGGAGCCAATAGAAAATTCAGTTATGCAATTATTTCAACAAATCAATAACTCAGAAACTGAATCAATTTGTACCAAATCATTAACTGAGATAAAGTCTGAGAAATTTCAGAATAAACCTTTGGGAAATTCTTTTTTACCTAACAAATCAAAAGTATGCCATGTATGCAAtcgaagatttaaaaaattatgtcacCTAAAAGTTCATTTACGAtctcatactggagaaaaaccaTATGCTTGTTCATTATGCAATATGCGATTAACAACAAATTCTTCTTACAAGttacATCTTAAAACTCATTATGGAGAAAAAGATTATAGTTGTTTTATTTGTGATAACAAATTTACTACCAAAGCTTCACTTCAAAAACATATGTCTATTCATAATAGAagccatgttCGTCGTCAACTAAAATTACATGATCAAAAATTGCGCAAAATTCGCGGGGATACTTCTGAGAAAAAGAGACGTCCACCTATCATACGACTTACTGAAAAGGAAACAGATGCTCTAGCTCAAAAACCACCAGATCAAGCCCAATCGATTTCTGAAAAAGTTCTTCTGGCATCCGTAGCTGAAAAAGATCGAATCAGTATAAAAGAagatccatcatcaaaatttaatatggaACCACTTCATGCAcatcaatgtaaatattgtcCTAAAAGTTTTCGTAAACCTTCTGATCTTGTTCGTCATATCCGAATTCACACTGGAGAAAGGCCCTATCAAtgtgaattttgtttaaaatcatttaCTGTTAAAAGTACTCTCGACTGTCACATTAAGACGCATTCAGGCACAAAACATTTTCCTTGTCATGTTTGTGGCAGTCTTTTTTCTACAAAAGGAAGTTTAAAAGTTCATATGCGACTTCACACCgGTGCAAAACCATTTAAATGTTCTCAATGTGAAATGAGATTTAGAACATCTGGACATCGTAAAGCTCATCAATTAactcatataaaattatctcaagGACAAAAACATGCAAGAAAacgaaaattacaattattagaaGAATCTCAAAATCAAGATCAAATTCAAGTCTTACAAGGAGAACAAGAACAAATTCTTGAAACAAAGGATAGTATGGATTCTCAAAATGAGAATGTTACTTTTAATACAAATCCAATCGATGAACAAGAAACAGAACAATTGCTTGAACAAACTATGTTAATACCTTTAACAATTAATGCAACTAATGAAGCTCTTAGAAATGATAATGGAGAAACAAGCACTCTTCAGTTACAACTGACTGATTTGAATAACACTTCAGGACCAACAACTTATATGCCACTTCATATTGATGAAAATCTTCTTCAGCAATTCCaggcaaataatattattttacaacctACAGAATGTGAAGTTCAATCTGACTTAATCAGATTTGAAATTCAAGAATGTCAACCACAAATGATATTTACTCCaattgaaactttgccagtgccTGTGACAAATGAGTGTAATTTTTGTGGAAAACAATTCAATAAAGCAAGTCAATTAGAGAGACACATTCCAACACATACAGgcgaaaaactatttaaatgtaCAGAATGTTCAAAATCCTACAGCcaaaaaacaactttaaaaATCCATATGCTTTCTCATACAGGAGAAAGGCCTCACTCATGTCCTCATTGTTCAATGAAATTTTCCCAAAAAGCTTATTTAAATGGACATATAAAAAGAATTCATACTAAAGACGACatggacaaaataaataaatcgttggAAGAACTTAGTTTATATGATGATGACATGCAGGTGGAAACTGAAGAAACAAATGATGATTCAACTAGTATGGCTTTAGATGAGAATTTTCTAGAAAATCATGAAACATCAGTACATTTAAGTGAACTTTTGAGTGAAATGAAAATCGACAATAGTGATAATTCTAATCAAGATTCAGAGATGTATGAGGTTCCCTCTAGCACAGAATTGGAAATTCAAGTAGGACATAGTGACGATTCAGCCCATGGAACATATACAAATTTTAGTCCAATGTCTGATCAGGATTCATGGCAAAACACTCCTCTTGAAGAGGAGGCTATTATTGAacaaccaaataataataatatatcaattgaaCCAAATACAAACATTTCAGATAATTTGTCAAATGAGCCAAATCCAGAAATTTTGTATTCGATTTCAAAAGATCCAAATATAGGCAATGTTAATTCAAAAGAATCAAAATCACCTAAAGAAAAGTCAAATACAGAGAGgtttaatgagaaaataaaatcacGTCAGAATAATCCTTTAACAAAAACACAATCATTgGATTATGAATGGTTCGAGAGAGCAAAGAAAGAAATCGGAGATAGACTTCCAATTGCATTTCCAAAAGAAAGATTTTCCCTTCCCATTTCATTTGAAAGAAGaagGATTCATCGTAGAATTAAAATCAAAGCAAGACACAAAAGTAGGGGGAATTCAGCTGAACCGCAACCTAAATCACCAAAGAATAGACCTGAACGTGTAGATTTACTTCCATCGCCTTTAAGAAGAAAATccggaaatttaaaaagaaggGCTTCAAGAAGTCCTTCTTCAAATGAAGGGGATTTTTCAAAAAGTGAGGATGATAAAAGTCCGTCATCTAATTCAAAGTACAAATCATCCAGTATCTCTTCTGTCACGGAAGccgatgaatttaatgaaaaagaatcaaataaaagtGAAGATGAAAATGATGATGTACGTTTATTTATCTGA
- Protein Sequence
- MEELTIDSPSLVVTLNSDSLIPNNTFVLSGDNSNLFTSSDPSSDPNSYITLPLQLIQNIDLNSTSQNVLLKNFANNTVLIDSSQLALLSNQLIIGNQVGTSVAFQQQNEKSLDIDPITYGLNIEEIDFEEINPTLKNNGNNQENETLRDKESISNDVNDANFKENTEENFEKTKDLEKSLRDPSIQPPIGKGPFKCRICFKEFIKWNHYNKHMKFHLDDKPFSCTKCSCSFNIKANLILHEATHNSEDLRCPECNRKFTRKAGLKAHIMLHQRDETVFCGECGDEFVTLAQLEEHKFQHSEEIIWTGIYECKECLLQFKKASDLRDHMKEHYKFKASLCHKSHKKNIDRSNFVHKCYTCSKTFQKPSQLLRHIRIHTGERPFKCNLCDRAFNQKGSLQIHMSKHNGNRPYKCEFCAAAFSQKGNLRAHIVRVHPIPFKGEETFKCSECPCVFKKLGTLNAHLSRMHRGENKIMAIDESLDPNKYFQFHVDAVMRGLAELENAASFSKEDNFSQNNPVSNLTEEVDGNILEQAIANAQCLDTKEMNLPNNEVKNKPKEKENKNDQTSIITLVDKFLDGSARKYVIRQRRVGKLRWHQCSFCTKEFKKPSDLVRHIRIHTREKPFKCNYCFRHFAVKSTLTSHIRTHTGVKQHICQICGKGLSSSGSLKLHLRTHNDLFPFECGECGKNFRKENLLKIHKQTHKDESTNDSENNSKRIRKKALDIKTVDKVVLEEPLVITDNGLVLPLPRNSLLLRPEQSGINRPFKCNVCLATFLKISHLKQHILMHTGERPFPCPHCQKRFISKGVLKCHLSTHTATRAYKCLDCRKEFTTMGSLKRHRDSHSDKRPYLCPYCAKTFKSAVACRKHMKIHRYELALRQTKPTEDSLENQTEQIPVVEDSNNPYLDITPELAQVLVDNGFHVSREISGEKIDDLQVSAETAQEIEQVDFNTAEHIPAITVEEHIPGVIPSVVPSETNLNLNTFSTEPNLPEFSGTLLESQTISENNNETIEDSSETDPSSRLPVKLDLNNRVELTQESSNPSVYEHSCFDSTVFSMTIPSDQLDIEGLSNSTSGISTILSQATTTNPNTEILEDLPVSPNNINLEGMVEVTISEPIENSVMQLFQQINNSETESICTKSLTEIKSEKFQNKPLGNSFLPNKSKVCHVCNRRFKKLCHLKVHLRSHTGEKPYACSLCNMRLTTNSSYKLHLKTHYGEKDYSCFICDNKFTTKASLQKHMSIHNRSHVRRQLKLHDQKLRKIRGDTSEKKRRPPIIRLTEKETDALAQKPPDQAQSISEKVLLASVAEKDRISIKEDPSSKFNMEPLHAHQCKYCPKSFRKPSDLVRHIRIHTGERPYQCEFCLKSFTVKSTLDCHIKTHSGTKHFPCHVCGSLFSTKGSLKVHMRLHTGAKPFKCSQCEMRFRTSGHRKAHQLTHIKLSQGQKHARKRKLQLLEESQNQDQIQVLQGEQEQILETKDSMDSQNENVTFNTNPIDEQETEQLLEQTMLIPLTINATNEALRNDNGETSTLQLQLTDLNNTSGPTTYMPLHIDENLLQQFQANNIILQPTECEVQSDLIRFEIQECQPQMIFTPIETLPVPVTNECNFCGKQFNKASQLERHIPTHTGEKLFKCTECSKSYSQKTTLKIHMLSHTGERPHSCPHCSMKFSQKAYLNGHIKRIHTKDDMDKINKSLEELSLYDDDMQVETEETNDDSTSMALDENFLENHETSVHLSELLSEMKIDNSDNSNQDSEMYEVPSSTELEIQVGHSDDSAHGTYTNFSPMSDQDSWQNTPLEEEAIIEQPNNNNISIEPNTNISDNLSNEPNPEILYSISKDPNIGNVNSKESKSPKEKSNTERFNEKIKSRQNNPLTKTQSLDYEWFERAKKEIGDRLPIAFPKERFSLPISFERRRIHRRIKIKARHKSRGNSAEPQPKSPKNRPERVDLLPSPLRRKSGNLKRRASRSPSSNEGDFSKSEDDKSPSSNSKYKSSSISSVTEADEFNEKESNKSEDENDDVRLFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -