Lmin003407.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963082975.1
- Location
- OY720344.1:53700056-53705275[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-13 3.3e-10 41.0 0.3 3 44 593 634 591 636 0.95
Sequence Information
- Coding Sequence
- ATGATCTCTCTTACGCCTAAAAAGGACGGTGGaccgaatataaaattttatgaatcgCCAGAAACAATCTCATTATTTGATGGAATTCGCACATGgcttttaaaaaattgcaaaaggTATGTACAAACCGATCCACCAACTAATAAAAGTTTGTCTACACTTGTAATTCAATTGATTCAATTTCAAGAAGATAACTTaggtaaaaatgttattaaaccgCCACTTACAAGACTACCAatgCGATGTTTTTTGGATTTCAAGCCCGGTGGTGCTTTATGTCACATTTTGGCtactgtatataaatttaaaagtgatcagGGATGGCGTAGATATGACTTTCAGtcacCATCAAGAATGGATCGCAATGTTGAAATGTTTATGAATGTAGAAAAagtattaattcataataaatgtcTTGTGATGCCATGTGTATTTGTAAGGCCAGAAGTTGATAAGAATATTCAAGTAAAAGTAAAAGATATCATTAAAAGACATCAGGGAACAATCACAGATAATGAAGATGAAGCAACTCACATTATATATCCAGAAGTGGATCCTTTGGATGAAGAATTAGCTCGTCCCACTATGCGACGAGAAAAAATGGTTTTACTTCATTGGTATTATTTTCCGGATTCACATGATACTTGGATTAACAGTGAATTACCGGTGGATCCTCCAGATTCTCCTCAAGCACACACAGGCATATGGCGGgtATCAGCAACATGGATTTTAAATACTGACGAATACAACGAATGGATGACAGAAGAAGATTATGAAGTTGATGAAAATGGTAGAAAGAAAATTCATCCTCTTCGTCTTTCTGTTGATGATATTATGAATCAATCTGATCCTGATCGAAGTAAAAAGAAACACAAACGTAAACGTTCACCTTCTCCAGCACCTAAACCTGGGAAAAGAAAAAGtggACGAGGTCCAGGAGCTCCTGtaggaaataaaaaacttaaaagtgaaGAAGAAGCTGATGATTTGACAAAAGATATGGAAGAACCTATTCCAGAACCTAATATACAAGAAGTTACGGTTCCGAAACcagGTTCTTCATCTAAAAAAGACAATGATCTTCAACCAATTAAAGGAGGCATGATGGCTGATTTGGATGAAGAAGCTGATAAAGGAGAAGATAGCCAGACAGGGAAAGCATCAGACACTAATACTCAAGAGTTTACGAATAAAGATGACGCCCAAGAAGACAACGTCACTGAACAAACGCATCATATTATCATTCCCAGTTATTCAGCTTGGTTTGATTACAATTCTATACACACTGTTGAAAAAAGAGCTTTGCCAGAATTTTTTAATgccaaaaataaatcaaaaactcCTGAAATATATCTAGCTTATCGTAATTTTATGATTGACACTTATCGACTCAACCCAACCGAATATATAACTTCAACCGCTTGTAGAAGAAATTTAGCGGGTGATGTATGTGCAATTATGCGAGTTCATGCATTTTTAGAACAGTGGGGTCTGATTAATTATCAAGTTGATTCTGACAGTCGCCCAACATCAATGGGCCCACCACCAACGTCACATTTCCATGTTTTATCTGATACTCCCAGTGGACTTCAACCTGTTAATCCTCCCAAAACTCCGCAACCATCCGCTGCTAAGATTTTATTGGATATGGAGAAGCGGGATGTAAATAAACGTTCAGATATTTTAGAGCCAGGTTCTAATTTTGGTCTTAAATTAGATCAATATGCTCGAAAACCTgcagcattaaaaaataaatcagctGCTTCAATGACACGTGAATGGAATGAACAAGAAACCCTCCTATTACTTGAAGGTCTTGAATTATATAAAGATGACTGGAATAAAGTATGTGAACACGTTGGTAGTCGAACTCAAGATGAATGTATTCTCCACTTTCTAAGATTACCTATAGAAGATCCTTATTTAGAAGACCATGAAGccgggGGTGCTCTTGGGCCACTTGCTTATCAACCGATTCCATTCTCCAAATCTGGAAATCCAATAATGTCCACTGTCGCATTTTTGGCCTCCGTTGTTGACCCCCGCGTTGCTGCTTCTGCAGCTAAAGCAGCAATGGAGGAGTTTGCAAATATTaaggatGAGGTACCTGCAGCGTTAATGGATGCTCATGTAAAAAATGTCGAAGCTTCAACAACTGATGGCAAATATGATCCTGCAGCTGGTTTAGCACAgACTGGTATTGCTGGTACTGTgccagaaaaagaagaagatgaaaacaaagaaaaagaaaagaaagatggagaaaaagaagaagataaaACTGCACCAACTTCTACAAGTGAATCTGAAGCAAAGAAGGATTCAACCGATAAACCAGAAGCAATGGATATCGacaagaaagaaaaagatgaaaaagaGGAAAAGAAAGATGAAGCCTCTACCCAATCGACTACCAGTGAAAAGACAGAAAAAATGGATACAGATGATGTTACTGTTAAACAAGAAAAGCCTCCCAcagaagaagatgaagaatcagaaaaagaaattgtaaaagaaaCAGAATCCGATCGCATTGTAAAAGATGCCCAATTACAATCAGCCGCTGCAGCTGCTCTTGCTGCAGCAGCAGTTAAAGCAAAACATTTAGCAGCTGTTGAAGaaaggaaaattaaatcacTTGTAGCTCTTCTAGTAGAAACGCAaatgaaaaaactagaaattaaaCTAAGACATTTTGAAGAATTAGAAACGACAATGGAAAGAGAACGGGAAGGTCTTGAATATCAACGACAACAATTAATAACAGAACGTCAACAATTCCATTTAGAACAATTGAAGGCAGCCGAATTTCGAGCAAGACAACAAGCCCATCAAAGACTTGCTGCTGAACAAGGCGGATGGGGTCCACCTCCTAATCAAAATCCCAATCAAAATATGAACCCTCAACCTAACCAACAGCCTACTGATCCAAGTGGTGTTGTTCCTTCTCATGTCACCCCAAGTACTACCCCACCCTCTCCTCAAGCTGTGCCTCATATGGCCCCTCAAGGTCCTGCACAACCTCCTCCCCCTCCTTCTCAAATGCCTTCTCCAGGACCTCCTCAGCCATCTCCCCAGCAACCAGTATAA
- Protein Sequence
- MISLTPKKDGGPNIKFYESPETISLFDGIRTWLLKNCKRYVQTDPPTNKSLSTLVIQLIQFQEDNLGKNVIKPPLTRLPMRCFLDFKPGGALCHILATVYKFKSDQGWRRYDFQSPSRMDRNVEMFMNVEKVLIHNKCLVMPCVFVRPEVDKNIQVKVKDIIKRHQGTITDNEDEATHIIYPEVDPLDEELARPTMRREKMVLLHWYYFPDSHDTWINSELPVDPPDSPQAHTGIWRVSATWILNTDEYNEWMTEEDYEVDENGRKKIHPLRLSVDDIMNQSDPDRSKKKHKRKRSPSPAPKPGKRKSGRGPGAPVGNKKLKSEEEADDLTKDMEEPIPEPNIQEVTVPKPGSSSKKDNDLQPIKGGMMADLDEEADKGEDSQTGKASDTNTQEFTNKDDAQEDNVTEQTHHIIIPSYSAWFDYNSIHTVEKRALPEFFNAKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSDSRPTSMGPPPTSHFHVLSDTPSGLQPVNPPKTPQPSAAKILLDMEKRDVNKRSDILEPGSNFGLKLDQYARKPAALKNKSAASMTREWNEQETLLLLEGLELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGALGPLAYQPIPFSKSGNPIMSTVAFLASVVDPRVAASAAKAAMEEFANIKDEVPAALMDAHVKNVEASTTDGKYDPAAGLAQTGIAGTVPEKEEDENKEKEKKDGEKEEDKTAPTSTSESEAKKDSTDKPEAMDIDKKEKDEKEEKKDEASTQSTTSEKTEKMDTDDVTVKQEKPPTEEDEESEKEIVKETESDRIVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLAAEQGGWGPPPNQNPNQNMNPQPNQQPTDPSGVVPSHVTPSTTPPSPQAVPHMAPQGPAQPPPPPSQMPSPGPPQPSPQQPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00090348; iTF_01566901; iTF_00396231; iTF_00370162;
- 90% Identity
- -
- 80% Identity
- -