Lmin012553.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- -
- Assembly
- GCA_963082975.1
- Location
- OY720345.1:72240951-72244449[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-14 1e-10 42.2 0.0 1 38 71 109 71 115 0.90
Sequence Information
- Coding Sequence
- ATGGCGATTTCACAGCTCAAAAGCGTGGAAAAGATATCCACGGCTAAAAAATACAAGTTCCCAACCGGACTTCTAACAAGCAATATAACAACAACTGATTGTCAACTTGCATCTAGTGGTGTATCACTTTATAATTTTCCtgcatttacaaataataactcTGTGTTTTTTACACTTAAAATGCCTCCAGTAAggacatttttcaaatattcggAAGATGATTTGAAGGCTGCCGTAGATGATGTCAGGGAGAAGAATGTTTCCATCAGAAAAGCTGCCAATAAGTACAATATTCCTCTTGGAACATTGCACAATAAGGTGAAAGAAAAATTTCCGTTGGTAAGACGAATGGGACCACCATCAGTCCTGAATAAAGAAGAAGAGCAACTGCTCGTTGATTGGATAATATCAAATGCCAAAAAAGGATTTCCTCTGAAGAGGAAAACCTTGTCTGAGTCGGTGACAAAAATTATTGAAGGCGACCAACGCCGAAACCCATTCACAAATGGAAAACCGGGCGAGAAATGGTTCAAAGCATTTCTGCGCCGAAATCCAACAATTACCGAGAGGTTTGCGGATCCTATAAATTCTGCCAGAGCTTCTGTAACAGAGCCAGCGATACGTAGCTGGTTCAATGAACTTCATGAGTATCTCCAAACCGAGAACTGTCTTGACATACTAGAAGAACCGAGAAGGATCTTCAACGCCGACGAAAGTGACTTCCAAACGTGTCCCGCAACAGGCAAAGTGCTGGGGCCTGCTTCATACAACAacttttatgagataaaaacgggaaaagaaaaagaagcttTAACTGTTATGGCTACTTTTAATGGCGCCGGAGAAACCATACCAGGAATGATTGTTTTCCCGCTCCAAAAAATTTCCAGGGACATTGCTCAGAACATCCCTGAGGATTGGGGAATTGGTAGATCGAAAAAGGGCTGGATGCGTGGAAGTACGTACTACGAGTACATTGGCAATGTTTTCATCCCGTGGCTTAAAAAGGAGAACATTAAACTGCCTGTTCTACTCTTGGTCGATGGCCACAAGAGCCATTTAACACTACAAGTGTCAAAATTATGCGCCGAAAACAAAATCCACCATTTCGCCTTTTATCCCAACGCCACACACATCTTGCAACCGGCCGATGTGGCTGTATTCCGACCACTCAAAGTCCGTTGGCGGGAAATAGTTAATGAATGGAAAACCAAGTCAGGAAACAAAGTTGTCACCAAGGGAGTGTTCGGGCCCTTGATCGCAAGCACGTTTAAAATTGATGCCACGCCACAAGTGATCAAAAACGGATTTCGAAAATGTGGTCTTTTCCCATATGACCCGAATGCGGTGGATTATAGCAAGTGCATGGACAGCAGAGACAGACAATGCCCGCCATCGACGGTGCCCGCCATCGaagatcaccagactgtgaatgttcatgcaatccaagcaacacgttcaagacaaacggactcACCTAAAGTCGCAGGGACTGAAGTGAGTCCTGCGTTTGCCGACGCTATATTATGGCCACATGAATCTCCACAAAAGACTAAAACAACATGGCGACGCTTACCTTACGCAACAACTTCAAAGCAATGGATTAAGTCTTTTGAAgacaagaagaaagaaaaagcagaaaaggaaaaggaaaagaaaagaagaattcAGGAAAGGCTAGATAAGAAAGAGAAACTTGATAAAAAGAAGCAAGAAAAACTTCGAGTTTCTAGTAAACGACAGCGACGTGTCAGTACCCCGGACAACTCTTGA
- Protein Sequence
- MAISQLKSVEKISTAKKYKFPTGLLTSNITTTDCQLASSGVSLYNFPAFTNNNSVFFTLKMPPVRTFFKYSEDDLKAAVDDVREKNVSIRKAANKYNIPLGTLHNKVKEKFPLVRRMGPPSVLNKEEEQLLVDWIISNAKKGFPLKRKTLSESVTKIIEGDQRRNPFTNGKPGEKWFKAFLRRNPTITERFADPINSARASVTEPAIRSWFNELHEYLQTENCLDILEEPRRIFNADESDFQTCPATGKVLGPASYNNFYEIKTGKEKEALTVMATFNGAGETIPGMIVFPLQKISRDIAQNIPEDWGIGRSKKGWMRGSTYYEYIGNVFIPWLKKENIKLPVLLLVDGHKSHLTLQVSKLCAENKIHHFAFYPNATHILQPADVAVFRPLKVRWREIVNEWKTKSGNKVVTKGVFGPLIASTFKIDATPQVIKNGFRKCGLFPYDPNAVDYSKCMDSRDRQCPPSTVPAIEDHQTVNVHAIQATRSRQTDSPKVAGTEVSPAFADAILWPHESPQKTKTTWRRLPYATTSKQWIKSFEDKKKEKAEKEKEKKRRIQERLDKKEKLDKKKQEKLRVSSKRQRRVSTPDNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -