Lmin029004.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- -
- Assembly
- GCA_963082975.1
- Location
- OY720349.1:9474308-9484861[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-13 1.3e-10 41.9 0.0 2 38 195 231 194 236 0.93 2 2 4.2 4.6e+03 -1.5 0.0 24 42 425 443 424 445 0.84
Sequence Information
- Coding Sequence
- atgttgaaaaatgttTGTTTGGTCCTGCTCTTGCGTTATCGCCATGTTGCCTGCATTCTCTCGAGGGGAGGTGGAGCAGTCATGACAGTTAGAAGAAGACTAAATGAAGCAAATTTGGCATCAAGAACACCCACAACTGATCATTTTCTTAGCAGAGCCCATAGAGTGACCAGACTTCAATACTCACATCAACATATCAATTGGTCATTAGAAGATTGGGGGCGAGTATTATTCACTCTATTCTTTCCAGATGGAAAATTGAGAacgaCTTCAGTTACAATTAAAAAAGAGATAACTGACATAGAACCTGAACCTGAAGATCACTATTATGATCAAATGAATGATGATGAAGGTCTCGCTCCACCTGAAATTGATATTAAACCACCAAATGAATTTAAAGCTGATGAATCAGCAAGCGATGATGATATGGGACAAATGGGTATGGATGATAATTATGATGATGTTCAATCCCCATCCAGCTCTTATACCCAAGAACCATCGATTAAAAAGTCTAAGAAAACCAAAACAGAAACAGCAGTACGTTCAAAGATGCCACCACGAGTGAAATATGGAGAGTGGCAGGAAGATGATATGAGTCGTGCATTAGCTGCAGTTAGAAATGGTGAAATGGGCTTCAATGCGGCTTCTAGAACCTATAGTGTGCCTAGGGCAACATTACAAAGACGTCTAACAAAAAAGAACCTCTTTGCTTTAGAAAGCAAAAAAATTTTAGGCACTTCAAATGACCTGCCCTTAGAAGTAGAGCAGGAACTAGTTGCACACGTACTAaaactagaaaaatatattttttatatcacacCAATAGAATTCCGCTTACTAGCTTTTGAAATAGCTGAGATGAAGAAGATTAACCACAGATTTAGCAAAGAAAAGAGAATCGCGGGAAAAAAAtggtattattcatttttaaaaaggcACCCCGAACTTAAGTTCCGTTTAACAGAATCTTCTTCCTTTGCACAAGCAAAAGGTTTAAACAAAGTCAACGTTAGCCACTTTTTTGATACTCTGGAAAAGATTGTTGATAAATATCAGCTCGATTCAACAAGAGTATTTAATGTTGATGAGATAGGTTTATCAACAGCTGAGAAGGAACTAAGAAAAATGCCTATATACAAAGGTAAATTATCAGAGGAGTCAGTAGCAAATCGCGAAAAAGATATTACTTCAACTGTAGTTTGCTGTACAAGTGCAGCTGGTCAGTATGTTGACccactaataatattcaaacgCTCACACTCAGCGGAAGGTATAAAATATGGAACTCCACCAGGAACATTAATTGCCTATAATTCAGAAAGTGGTTCTGtcaataagaatatatttattagatggtTAAGGCATTTCATCAATACTGTTCATCCCTCTAAGGAAAGAAAAGTGCTGCTTCTTGTAGATGGACATTCAATCCACACGAAGAATCTCGATATTCATGATATAGCTCGGGATAGCGGTGTCATTATAATGTCACTACCAGGTCAAACAACGCACATGTTAAAACCACTTAATGTATCATTTTTTGAGTCTTTGAGTAACTTCTACATTGCGGaaataaacatatttcaaaAGCATAAACTCTGTGAAGGCAAACCCGAAGTTATCACACAATATCATATTGCTCAACTTTTTAGTAAAGCATATGCACAGGCTGCAACAAAAGTGAATGCAGTAAATGGCTTTAAAGAAACAGGAGTTTGgccaataaataagaatattttacaaGATTGCCATTTTTTAGATAGAGTTTCGATGCAGTTTAAAACGCTTGATATTCCTATTATAGAAGCACCTGCCAATGAAGATATTGGTGAAGTTAACATTTGGcccGGGCCTAAGAGCAAAACTAAACCATCTCTTGAAATGCCATCGACCTCACATATGGATATGGACTCAGATCCAGATGACCCTGAATCAATGATGGATGAAGATATGGAACAACCTGAAGACGATGAATCTCAAGCAAGCAAAGATTCCGATTTTAATGTGGAAGGTGAAATGGGCAGTACTGATGAGGAGCAACATGTATCTTCAAGTGATAATAAACATTCAGATGCTGAATCAAATGCTTCATCTGAAACTAAAAGGAAACGAAGGAAACgttcaagaaaaaataagagGAAGGCCTCTCAAGAAGAAGTTTTAACAAATGTTGTAATTACTGAAGAAGATAGGAAATTATTcccttataaattatatgatatggAAGATAAGGAAATTCTAACTTATGGAGAACTCTCTATCAAATGTGTCGGCAGAGTAAATTGCAGATTCtgcaaatattctattgaaactTACGAAGAAATGCGTGATCATTCTAAAGAAAAACATGACATTGGATTAATTGAATGCACCCATTGCTTTTGTCTTTTTGGCTCGCCTATTTCTCACAATTCTCATTCCATTTTACATGCTGGAGATCAACCAACTTCCTACTACTGTGAAGTTTGCGGAAGCGCTTATCAAGATCAAGAATATTTGACTAGGCATAAATCCATTTGCCGAGAAGAATAA
- Protein Sequence
- MLKNVCLVLLLRYRHVACILSRGGGAVMTVRRRLNEANLASRTPTTDHFLSRAHRVTRLQYSHQHINWSLEDWGRVLFTLFFPDGKLRTTSVTIKKEITDIEPEPEDHYYDQMNDDEGLAPPEIDIKPPNEFKADESASDDDMGQMGMDDNYDDVQSPSSSYTQEPSIKKSKKTKTETAVRSKMPPRVKYGEWQEDDMSRALAAVRNGEMGFNAASRTYSVPRATLQRRLTKKNLFALESKKILGTSNDLPLEVEQELVAHVLKLEKYIFYITPIEFRLLAFEIAEMKKINHRFSKEKRIAGKKWYYSFLKRHPELKFRLTESSSFAQAKGLNKVNVSHFFDTLEKIVDKYQLDSTRVFNVDEIGLSTAEKELRKMPIYKGKLSEESVANREKDITSTVVCCTSAAGQYVDPLIIFKRSHSAEGIKYGTPPGTLIAYNSESGSVNKNIFIRWLRHFINTVHPSKERKVLLLVDGHSIHTKNLDIHDIARDSGVIIMSLPGQTTHMLKPLNVSFFESLSNFYIAEINIFQKHKLCEGKPEVITQYHIAQLFSKAYAQAATKVNAVNGFKETGVWPINKNILQDCHFLDRVSMQFKTLDIPIIEAPANEDIGEVNIWPGPKSKTKPSLEMPSTSHMDMDSDPDDPESMMDEDMEQPEDDESQASKDSDFNVEGEMGSTDEEQHVSSSDNKHSDAESNASSETKRKRRKRSRKNKRKASQEEVLTNVVITEEDRKLFPYKLYDMEDKEILTYGELSIKCVGRVNCRFCKYSIETYEEMRDHSKEKHDIGLIECTHCFCLFGSPISHNSHSILHAGDQPTSYYCEVCGSAYQDQEYLTRHKSICREE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -