Lmin021975.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- ttk_1
- Assembly
- GCA_963082975.1
- Location
- OY720347.1:49878681-49881402[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-16 3e-13 50.3 0.0 2 45 370 414 369 414 0.95
Sequence Information
- Coding Sequence
- atgtcaatgcAACAATTTTGCCTTCGGTGGAATAATCATCAACCTAACTTCATATCTGTATttacaaatcttttaaatagtCAATCGTTAGTGGATGTCACTCTTGCAGCCGAAGGCCGCCACATTCAAGCACATAGAGTAGTTCTATCAGCATGTAGTTCATATTTTCAGacccttttttctgttaatccaCATCAACATCCTATTGTTATCTTAAAAGAtgttaaatataatgatttaaaaataattgttaattttatgtattatggTGAAGTTAACGTTTCTCAAGAACAATTGCCTTCAATAATAAagacggcagaaaatttgaaaattaaaggaTTAACTGATATGccagaaaacaatttattattgtcAAAATCATCTTCAAGTCAGTCATCAGATAAACCAGAATCTTtatctttagaatcaaattggAATATTGAAGGAAGACCATTATCTCCTTCATCTAAGAGAAAGAGATTGAGGAAATCTTCAACAGGATCAACAGaaaatacttCAGAGGAAATTCCAAATGAAATAAGCTTAACTTCTTCACCTGGATTGGCTAAACATGAAACATTACTTGTTACACCTGAAACTGACAGTATTCGAAGTGAAAGTACTCTCAGAGCAAGTGGTCATGATAGAAGTACCGAATCTGAACCTAGGGAAGGTTCTCAAGAAAGCACTGATGAAGCTCCTTCACATttgggtTCTCAAGATAGTACTGCTTCTGAAGGATTAGGTCCTAATCTTCATGAACCTTCAACTTCTCATACCTCTGGGCAggGTCTCCAGTGGAGCCTCGTCGAGCACAGTTACCCGCCGCCGCCGCCCCCCAGGGCACACCTTCAATACGCCACACCCACATTTCCAGGTCATCAAATGTTGCCTATGTCTATGTCCCCTCCATGCCAAATCTTAGCATCCTACACAATGTCCTCGAATGCATCTCATCCTGGCGGTGTCTCAAGTCCTTCATCAAATTCTTGTGATAGTCCTTCTGCAAGTGAATGTGGTAGCGTATGTAGAGGTGCTGTTGGGGCTGGTGGCGGCGGAAATACGGGCGGCACTCCTCGAAGAAAACGGACTACGAATCCTCAAAATGATGAGAATTTCATGAGAGCTTTGGATGCAGTTCGAATGGGAGGAATTGGATTTTGTAAAGCAGCTAGAATGTATGGCGTAAACAATCGGACTTTATggcttgaatataaaaaaagaggtTATCCTGTAAATAGACAAAGTGTTAAgactcgtaaactagaaacaaTAACTTCATCCAGTCCACAACCATCGACATCAGGGACACTGCCCCCGCCACCCCCTCCTCCTCCGCCTCCCATTTCCTCCAGTTCTTTTTCGCCACCACCTGAGTATATACTACCTCATCAAGGTCTCATTCGTCACCGATATCCTGAACATGCTGCGGCAGCAGCAGCTGCTGCCGCTCAACTCCATTCAAATTTCAATCCACTTTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFTNLLNSQSLVDVTLAAEGRHIQAHRVVLSACSSYFQTLFSVNPHQHPIVILKDVKYNDLKIIVNFMYYGEVNVSQEQLPSIIKTAENLKIKGLTDMPENNLLLSKSSSSQSSDKPESLSLESNWNIEGRPLSPSSKRKRLRKSSTGSTENTSEEIPNEISLTSSPGLAKHETLLVTPETDSIRSESTLRASGHDRSTESEPREGSQESTDEAPSHLGSQDSTASEGLGPNLHEPSTSHTSGQGLQWSLVEHSYPPPPPPRAHLQYATPTFPGHQMLPMSMSPPCQILASYTMSSNASHPGGVSSPSSNSCDSPSASECGSVCRGAVGAGGGGNTGGTPRRKRTTNPQNDENFMRALDAVRMGGIGFCKAARMYGVNNRTLWLEYKKRGYPVNRQSVKTRKLETITSSSPQPSTSGTLPPPPPPPPPPISSSSFSPPPEYILPHQGLIRHRYPEHAAAAAAAAAQLHSNFNPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00849971;
- 90% Identity
- iTF_00849971;
- 80% Identity
- iTF_00849971;