Lmin023134.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- eIF1_1
- Assembly
- GCA_963082975.1
- Location
- OY720347.1:66225212-66234242[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00027 0.3 11.9 0.0 2 36 211 245 210 253 0.85 2 4 1.1e-07 0.00013 22.7 0.0 8 40 267 298 261 303 0.86 3 4 0.64 7e+02 1.1 0.0 20 35 336 351 323 357 0.74 4 4 7.4e-12 8.1e-09 36.1 0.1 4 38 381 415 379 423 0.89
Sequence Information
- Coding Sequence
- atggaTAAAAAATCTGAATTTTGTTGTATTAAATGGAATAATTATCAAGGGTATGTCAATGAAATACTTGTTGAATTATTGAATGCTAATTCAATGGAAGATGTAACGTTATGTGCACAAGGCTTAAAAATAAGAGCACATCGAATTATTCTATCAGCTTGCAGTTCTTTTTTTAAGGAAATTTTTGCAAATATTGATGATAGCAatcctattataatattatgtgatattaattacGAAGATATTAAATCTATTGTTGAATTTGTATATAGTGGAGAATTAAATATTGTTGCGGAAAAATTTCCCTCTGTGCTCAAAACtgcagaaattttaaaaattcgtgGGTTAATGGGGgtatCGCACCATTtatcttctttaaatataaatacttcaaTTTCTGTATCCAACTCAAGTGATGTACCATCACCAGGTATTATTACTGAAATTAAAACTGaagaaattacaaatgaaaTAACTCTCTTAGACAATAATACtaaagatttaaaaagaattgatGAATCTATAATAGAAGATCCTGAAGAGGAATTagattttattcaaaacaatGAAGAACaaaaccaaataaaaaatagaaaaccaagaaaagaatcaaataaaaaagtttacaatgaAGGTATAATGATGGCTGCCCTAGAAGAACTAAAAAGAGGAAAATCACTTGTTCAAACAGCCAGTGCACATAAAATTCCAAGAAGTACTCTCTATGTACGAGCCCGAAATATGGGTGTAACAACGAATTTAACAAGGCAAGAGTATAGTGCTGATAAGGTCCGTCAAGCATTCAAAGCTGTTGCGGgagGAGCTACTTTGAGACAAGCAAGTGAATTGTATAAAATACCAAAAACTGTTTTATGGAGACGTGTACAAAAAGAAGATTCTGTAAAATTAGAAGGAGGTTTAGTACATAGAAGAATATCTAAGAGGTCATATGATGCTTCTTCTAAAGCTGAAGCAATTAAGGCACTTGAAAGAggagaaaaattaacaaaagttgCTCAACAATTTAAgataccTAAGGCGACATTATTTAGAGAAAAAACTCGTCTAGTGGAATGTGGAAAGTTACCATGGAACTCTTTAAGGAAGAGAGTTAAGGACCAAGATAACCGATTACAGAGCCGTTTAAATGAGGCAGTTGAAGCTTGTAGAGAAGGTAGAATGAGTCACGCATCAGCAGCTATAGCATTTCAAgtaCCAAAGACTACAATTTGGAGAAGAATGCAACAATTAGGAGGAAGTTCATCGCGAAAATCTGAAATAAGATCCTCAAAACAAAACATAGTAGAACAATTAACTTCTGAAAATATTGGTGAAGTGGTTTCAAAAGAAGTAGATGCTGCTGTTGCTCAACTACAAGAACAATCCTCATTTACATTAGTTGAAGTTCCGGTAACATCACAACTACCTGTTACTTATATGGATGAATTTCCTGAGGCATCCTTGATAATTTTAACAAACGATGAACCTGATAATATTTCTCTTCAAGAAAGTGACCAGATTATTGTTTCAACAGTtaaCCCCTTTGCAGATGCAATCAAGGGTGCAGATGATGATGTCCAAGACGGTCTCGTGCATATAAGAATTCAACAACGAAATGGTAGAAAAACGTTAACAACAGTCCAAGGCCTCTCCTCAGAGTATGACTTGAAGAAAATTGTTCGAGCATGTAAAAAGgagTTCGCCTGTAATGGCACTGTGATTGAGCATCCCGAATACGGGGAGGTACTACAACTCCAAGGTGACCAACGTGAAAACATCTGCCAGTGGCTTACTAAGTCAGGCCTTGCTAAGCCTGAACAACTTAAAGTCCACGGGTTTTAA
- Protein Sequence
- MDKKSEFCCIKWNNYQGYVNEILVELLNANSMEDVTLCAQGLKIRAHRIILSACSSFFKEIFANIDDSNPIIILCDINYEDIKSIVEFVYSGELNIVAEKFPSVLKTAEILKIRGLMGVSHHLSSLNINTSISVSNSSDVPSPGIITEIKTEEITNEITLLDNNTKDLKRIDESIIEDPEEELDFIQNNEEQNQIKNRKPRKESNKKVYNEGIMMAALEELKRGKSLVQTASAHKIPRSTLYVRARNMGVTTNLTRQEYSADKVRQAFKAVAGGATLRQASELYKIPKTVLWRRVQKEDSVKLEGGLVHRRISKRSYDASSKAEAIKALERGEKLTKVAQQFKIPKATLFREKTRLVECGKLPWNSLRKRVKDQDNRLQSRLNEAVEACREGRMSHASAAIAFQVPKTTIWRRMQQLGGSSSRKSEIRSSKQNIVEQLTSENIGEVVSKEVDAAVAQLQEQSSFTLVEVPVTSQLPVTYMDEFPEASLIILTNDEPDNISLQESDQIIVSTVNPFADAIKGADDDVQDGLVHIRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00849993;
- 90% Identity
- iTF_00849993;
- 80% Identity
- iTF_00849993;