Lmin032473.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- bab1_1
- Assembly
- GCA_963082975.1
- Location
- OY720349.1:68310361-68323225[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-11 1.2e-08 35.5 0.0 1 39 497 536 497 540 0.90 2 4 3.1e-13 3.4e-10 40.5 0.1 1 39 551 589 551 593 0.95 3 4 6.1e-18 6.7e-15 55.6 0.0 3 45 608 651 606 651 0.97 4 4 1.4e-19 1.6e-16 60.8 0.1 1 43 658 701 658 702 0.96
Sequence Information
- Coding Sequence
- ATGGCTGGTCAACATTATTGTCTTCGATGGAATAATTATCAATCCAACATGACTTCTGTATTTCATCAATTATTAACAAATGAAGCGTTTGTTGACGTTACTCTCGCATGTAATGATTCATCTTTAAAAGCGCACAAGgttgTTCTCTCAGCTTGTTCAtcgtattttcaaaaattattgttaGAGAATCCTTGTAAACATCCAACAATAATTATGCCACAAGATGTATGCTTTAGtgatcttaaatttattattgaatttgtatACAGAGGTGAAATTGATGTCAGTCAAGCAGAATTACAGtcATTACTCAAAACTGCTGACCAACTTAAAATCAAAGGTCTTTGTGAGGTTCCTGATAGTAAAGATGGAACTTCTCTACCAGCTGGTGCAGAAGTAACGCCACTTCCTATCCTCTCTAGACGTTCCTTTACAAAATTAAGGCGGCTATCAGTTGGCAAAAGACAacgattaaataataacaataatattttaactaatgGTGATAATCGTCGAACATTATTCAAATCTGAACCACAAAGTGCGATTTCGCCGCCACCACCACCACTAAATCCTGAACCATTAACCTCTCAACACATTACGTCTCCCTCCCTTCATCATCCCCAACATCCTTCGACTCCATCAACACCCACAACACCATCTTCTCCGAATTCAATGCAAACACATCATTCTTCACATCAACATGCGCTTCCTCCGCCTCAGACACATCATTCCCATCAACAGTTGAATTCAATGCACCAACTACAAGAAGGAACCTACTCTCCACAACTAGACTCACTAGAAACAaaTTCAATGACACCACATATATTAGGACAAGAACATCCAGGTCTCGAAAGAGTTAGTGAGCAAAATTCAGTGGCGACCTCAACAGAGGATGACGTGCCAGTAGTCGTCCTTGAATCTCGTATCCAACAACAGTTGAAccaacaacaacagcaacagACTCCTGGGCAAGAGCACTCTCCAGGGATGCTGATGGGTCCTTCTATGAATAGTTTAGACGGGGGAGGTGGTGGTGGATGTACGGGGCCTCCTTCAAGTGGAGGGGCCACTGACCCTGGAGCAGATGTGGACCTTACACCTGATACACAGCCTACAGGACCCCAAGCCACTCTTGTTGAAAATATGGACTTAAATGAATGTTCCCCCCACGATTCTCATCATGACATGCAggaTACTTCTGATTGTAATCGCGACAGCGTTAAAGTCAAATTTGAAACACTTAGAGCGATGGAACAAGCAGAAACAATTGACATTGATAGTCATATGTCAGAAAGgacTGTTGGAGATGAAGATCATTCTATGCATACAATGATGATTACTCCTGAACTCTTAGGTCTTATTCCATCGAATTCTGGTCATAATGGAGATCCTGGACCAAGTCAATCTTCTTCATCCGGTAtgatttatttttattttttgaaaggagGGCCTAATGAATCAACTAAAGGGACTCCGAAAACATGGACTCAAGAGGATATGGAACTAGCTTTGGACGCCTTACGAAATCATCACATGAGCTTAACCAAAGCCTCTGCTACATATGGAATTCCATCCACAACACTCTGGCAAAGAGCACATCGTCTAGGCATTGATACTCCGAAAAAAGAAGGTCCTAGTAAAACATGGAcagaagataatttaaatagcGCCTTAGAAGCTTTAAGAACTGGTTCAATATCAGCAAATAAGGCTAGCAAAGCTTATGgaATACCAAGTagtacattatataaaattgctcGTAGAGAAGGAATACGTTTATCAGCTCCATTTAATGCTGCACCAACGACATGGAATTCTGATGATTTGGAACGAGCATTAGAATCAATTCGAAGTGGACAAACATCTGTGCAAAGAGCATCAACAGAATATGGAATTCCAACTGGGACATTATATGGACGTTGTAAAAGAGAAGGAATTGAATTAAGCAGATCTAATCCTACACCATGGTCTGAAGATGCCATGACAGAAGCCCTTGAAGCGGTTCGTGTTGGCCAAATGTCAATAAATCAAGCCGCTATTCATTACAACCTTCCTTATTCATCATTATATGGACGATTCAAAAGAGTAAAATATGAAGCCGAAGGACATCATTCTGAAGATATACGGCACCATCAGCACGCGTCTCCTCCACCTTCACAGCCTCAAATAATGGTACTTCAATATCAACAACAACCACCACCTCATGCCATGTTCCAACAACATGCGGCTAGCTGA
- Protein Sequence
- MAGQHYCLRWNNYQSNMTSVFHQLLTNEAFVDVTLACNDSSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCFSDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPDSKDGTSLPAGAEVTPLPILSRRSFTKLRRLSVGKRQRLNNNNNILTNGDNRRTLFKSEPQSAISPPPPPLNPEPLTSQHITSPSLHHPQHPSTPSTPTTPSSPNSMQTHHSSHQHALPPPQTHHSHQQLNSMHQLQEGTYSPQLDSLETNSMTPHILGQEHPGLERVSEQNSVATSTEDDVPVVVLESRIQQQLNQQQQQQTPGQEHSPGMLMGPSMNSLDGGGGGGCTGPPSSGGATDPGADVDLTPDTQPTGPQATLVENMDLNECSPHDSHHDMQDTSDCNRDSVKVKFETLRAMEQAETIDIDSHMSERTVGDEDHSMHTMMITPELLGLIPSNSGHNGDPGPSQSSSSGMIYFYFLKGGPNESTKGTPKTWTQEDMELALDALRNHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWTEDNLNSALEALRTGSISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTTWNSDDLERALESIRSGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRVKYEAEGHHSEDIRHHQHASPPPSQPQIMVLQYQQQPPPHAMFQQHAAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00849981;
- 90% Identity
- iTF_00849981;
- 80% Identity
- iTF_00849981;