Basic Information

Insect: Kuschelorhynchus macadamiae
Gene Symbol: SF1
Assembly: GCA_030620095.1
Location: JAUTXW010000381.1:1-58521[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00075 0.19 15.1 1.2 1 23 17 39 17 39 0.97

2 18 0.16 41 7.8 4.8 1 23 48 70 48 70 0.97

3 18 0.0081 2 11.9 5.0 1 23 82 104 82 104 0.97

4 18 0.00036 0.092 16.1 0.5 1 23 113 135 113 135 0.95

5 18 0.0049 1.2 12.6 0.7 1 23 142 164 142 164 0.98

6 18 0.016 4.1 10.9 2.7 1 23 565 587 565 587 0.97

7 18 4.2 1.1e+03 3.3 3.2 1 23 598 620 598 620 0.93

8 18 0.057 15 9.2 2.4 1 23 629 651 629 651 0.96

9 18 0.027 6.9 10.2 1.0 1 23 690 712 690 712 0.98

10 18 2.5 6.2e+02 4.1 2.9 1 23 718 740 718 740 0.97

11 18 3.8 9.7e+02 3.5 8.1 1 23 1007 1029 1007 1029 0.96

12 18 2.5 6.4e+02 4.0 0.9 1 23 1038 1060 1038 1060 0.95

13 18 0.0072 1.8 12.0 4.2 1 23 1068 1090 1068 1090 0.97

14 18 0.01 2.6 11.5 0.6 1 23 1099 1121 1099 1121 0.98

15 18 5.7 1.4e+03 2.9 5.5 1 23 1129 1151 1129 1151 0.95

16 18 0.00086 0.22 14.9 2.1 1 23 1160 1182 1160 1182 0.96

17 18 4.5 1.1e+03 3.2 3.5 1 23 1195 1217 1195 1217 0.92

18 18 0.11 29 8.3 0.6 1 23 1226 1248 1226 1248 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00075	0.19	15.1	1.2	1	23	17	39	17	39	0.97
2	18	0.16	41	7.8	4.8	1	23	48	70	48	70	0.97
3	18	0.0081	2	11.9	5.0	1	23	82	104	82	104	0.97
4	18	0.00036	0.092	16.1	0.5	1	23	113	135	113	135	0.95
5	18	0.0049	1.2	12.6	0.7	1	23	142	164	142	164	0.98
6	18	0.016	4.1	10.9	2.7	1	23	565	587	565	587	0.97
7	18	4.2	1.1e+03	3.3	3.2	1	23	598	620	598	620	0.93
8	18	0.057	15	9.2	2.4	1	23	629	651	629	651	0.96
9	18	0.027	6.9	10.2	1.0	1	23	690	712	690	712	0.98
10	18	2.5	6.2e+02	4.1	2.9	1	23	718	740	718	740	0.97
11	18	3.8	9.7e+02	3.5	8.1	1	23	1007	1029	1007	1029	0.96
12	18	2.5	6.4e+02	4.0	0.9	1	23	1038	1060	1038	1060	0.95
13	18	0.0072	1.8	12.0	4.2	1	23	1068	1090	1068	1090	0.97
14	18	0.01	2.6	11.5	0.6	1	23	1099	1121	1099	1121	0.98
15	18	5.7	1.4e+03	2.9	5.5	1	23	1129	1151	1129	1151	0.95
16	18	0.00086	0.22	14.9	2.1	1	23	1160	1182	1160	1182	0.96
17	18	4.5	1.1e+03	3.2	3.5	1	23	1195	1217	1195	1217	0.92
18	18	0.11	29	8.3	0.6	1	23	1226	1248	1226	1248	0.96

Sequence Information

Coding Sequence: ATCCGCAAACAAGAACGTGCACGTAAATCCAGAGATGAAGCTAAAATCCATAAATGTTCGGAGTGTTCTTATGAGTCAGTTCGTAAGGGTAACCTCCAAAGGCATGCGATGATACATAAAACACCAGATAAAAAAGTACGTTTCGAATGTAAGCACTGTTTATTTAAGACAGATCAGAAATCGTATCTAGAGAGCCACATCATTCACCACAGAGAAGAAATGGGATTTACAACAACCCAAAAATTTCACTGCCCTGAGTGTTCATTTGAAACCCATACAAAGGATAATCTAAAACGACATTTGCTCAGGCATAAAATGCCAGATGAAAAAGTGTGGTACAATTGTACAGACTGTCCGTACAAAACAGATCGGAAAGAAAATCTAAAGCGGCATGCCGTTGTTCATTATAGTGAAAAAGTACGGTACGAATGTGCACAATGTTCATATAAAACAGATCGGAAAGATACTTTAAAAATGCATCAGATAGTACATCGGCAAACGAACATTCGGATGTTCCATTGTACCGAGTGTCAATTTAAAAGCCACTCAAAGGCAAAATGCAACTTATGTAAAAGTACTTATTCtcataaaaatggaaatataaccaatttaagaaaacatttaaaaactagacatccAACAACAACATTAGTCTTGGAGAAAAGTGAGAAAACAGGTACATCATTGCTCCAACCaggtccATCAATATCCACAACGGAGACAACTGCATCAGCAATATTAACCTTGGaaaaagataatatagaaaatCCAGATCACGTGACAAGGGAAATAGCGGAAATACCAGAACATATGGGTGAAGCTCAAGGTTTTAGAGCTCTTTTAAGTGAACTTGAGCCATCATATGTCATACCTAGTAGACCAACATTCAGTAAATCCCTAATGCCAGTCAAATATTATGCAAAAGTTGAAGCATTAAAAGCCTTACTGGAAACAACCGAGTATGTTACACTCAGTACTGATGGTTGGACTTCCATCAATACAGAGAGTTATATAGCTGTTACAGCTCACTTTATAACGAAGGACTGGCAATTTTATGGATGTCTGCTgtcatgttttaaatatgatgAGAGACATACTGCTGAAAAAGAATTACAACGAGTATGTAATGAATGGCGTATTTCCGATAAAATTTATGCTATATCGACGGACAACGCCGCAAACATTGTAGCAGCAATAAAAACAACTAGATGGGTCCATATTCCTTGCTTTGCCCATACAGTGAATCTTATCGTTAAAGAAGGTTTAAAGTTAACTGAGgagctaaaaacaaaaattaagaaaatagtaGATCATTTTCATAGAAGCTCTCACTCTACGACTAAATTTGTTTCAACACAAAAACAAATGAACCCTAATGCAACTCCTCTTAAATTAATTAACGAGGTTCCAACAAGGTGGAATTCCACTTTTTGTATGGTAGAAAGAGTAGTTGCGTTATCAGAACCATTGGCCGCAACTGTTGCTGTTTTGCACATTCCAGTTATTCTACCGACAGAGGAGGAATGGATAATTTTAAAGGAGTTGTGTAAAGTTCTCAAGCCATTTGAAACCGTAactgttgaaatcagttcagaaAAGCAAGTTAcactttcaaaagtaattttgaaaagGATCTCCACACATGAATTTACCCGTAAATCAAGATTTAAAAGGCCAGATGAAAAAGTATGGTACGAATGTGCCCAGTGTTCATATAAAACGCATCGGAAATGGTATCTAAAGAGACATATGGTTATACATAgagaaaaaatggaagtcgacATTCAGGAATTTCACTGTCCCAAGTGTCCATTTAAAACCCTCTTGAAGGATTCTCTGAAACGACATTCGCTAAGACATGAAAATCCAGATAATAAAGTGTGGTACGAATGTGCACAGTGTTCACATAAAACACTCCGGAAAgacaatttgaaaaaacaccAAATAGTACATAGGCAAACGAACATTCAGATGTTCCACTGTTCCGAGTGTTCATTCAAAAGCCACTCAAAAGTTTGTTTAAAACAACATTCGATCAAACATAAAAAGCCAGACGAAAAAGCATGGTACGTATGTACACAGTGTTCATTTAAAACCGTTCGGAAAGAAACAATACAAAAGCACCAAATAGTGCATAGGAAAACTAGGAAGTTCCACTGCAGCGAATGTGCGTATAAAACTCACTCAGAGATATATTTAAAAGCACATTTAGCCAGGCATAATCCAGATGGCAAAGGACGCAGACAATCTGCAATGGAAGTAAGTCTTTCAGTGGTGACACCTGTATCTGTCAAGGAGGAAGATCTAGAATATAAATATGAACAGAGTCATAGTGATAATAAAGAATCTGCAATGGAAATAAGTCTTTTGATGGAGACACCTATATTGATCAAAATGGAAGATCTAGAATCTAAATATATACAAAGTGATAATACTGATAATGATAATAGagaaTCTACAATGGAAGAAAGTTCTTTGGGGAAGGCACCTGTATTGGTCAAAGAGGAAGATCTAGAATTTAAATATGAACTGAGTAATTGTGATAAtaggtATGAAGTTGACAGTGATGTATATTTTACCAACAAAACGGAAATGGGAGATATAAAAACCGAATCGGAAGATTTAGAACTTGATAATGAAAACCTCAGTAAATCATATATAAATAATGGAGGTCATATGGTGGATATTGATGATCATACCAATGATAGTGATGTTAAAGTGAGAAAATATAGTGAGGAGTATCTCAATGAATCTTATTCTATAAAGCATGAGGAGATCAATATCGAATGTGAGGATGAGGAGGATTCTTCTGAAGGATCGCCATCTCCAGAACCCATATATAGCAGCGATGGCAAACGGCTGAACACAAGGGAATTTCGGACAAGAAAAAGATTAGAAGAGGAGAGACATAACTTGGTCCTGAAAATGCAATCTATAAATCCAGAGTTTAAACCACCTGCAGATTACAAGATCTCCAAAGATAAACTTACACGTAAATCAAGAATTAGAGTAAAAAGTCATAAATGTCCACATTGTACTTATCAGACAGTTTCTCATTATCACATCAGAAGGCATTCGATTATACATAAAAGGCCAGATAAAAAAGTGTGGTACGAATGTGTGCAGTGTTCATTTAAAACAGGATGGAAAGATACATTAAAAAAGCACCAAACTGTACATACGCAAACTGTCATTCGCAGGTTTCAATGCACTGAGTGTCCACATAAAAGCAAATCAAAGTACAATCTCAAACTACATTCGCTTAGACATAAAAAGGCTTATGAAAAAATGTGGTACGAATGTGCGCAGTGTTCATTTAAAACAGACCGGAAAGGAACTTTAACAAATCACCAAATTGTACATAGGCAAACTGACAGTCAGAGGTTCCACTGTCGCGAGTGTACATACAAAACTCACTCAAAGGATTATCTGAAACTACATTCGATCATACATAAAAAACCAAATGAAAAAGTATGGTACGAATGTGCGCACTGTTCATATAAAACAGATCAGAGATCTAATTTAAGGAGGCATATCGGTAATCACAGAGACCAAATGGGATctgcaaaaaatattcaaaaatttcacTGCCCTGAGTGTCCATTTAAAACCCATTTAAAGAGATCTCTAAGACAACATTCGGTCATACATAAAAAGCCAGAAGAAAAACTGTGGTACAATTGTGCAAACTGTTTGTTCAATACGATTCGGAAAGCAAGTTTAAAAAGACATGTCATGTTACATAATATTGAGGTCAGACATAAAAATTTAGATGAAAAAGTATAG
Protein Sequence: IRKQERARKSRDEAKIHKCSECSYESVRKGNLQRHAMIHKTPDKKVRFECKHCLFKTDQKSYLESHIIHHREEMGFTTTQKFHCPECSFETHTKDNLKRHLLRHKMPDEKVWYNCTDCPYKTDRKENLKRHAVVHYSEKVRYECAQCSYKTDRKDTLKMHQIVHRQTNIRMFHCTECQFKSHSKAKCNLCKSTYSHKNGNITNLRKHLKTRHPTTTLVLEKSEKTGTSLLQPGPSISTTETTASAILTLEKDNIENPDHVTREIAEIPEHMGEAQGFRALLSELEPSYVIPSRPTFSKSLMPVKYYAKVEALKALLETTEYVTLSTDGWTSINTESYIAVTAHFITKDWQFYGCLLSCFKYDERHTAEKELQRVCNEWRISDKIYAISTDNAANIVAAIKTTRWVHIPCFAHTVNLIVKEGLKLTEELKTKIKKIVDHFHRSSHSTTKFVSTQKQMNPNATPLKLINEVPTRWNSTFCMVERVVALSEPLAATVAVLHIPVILPTEEEWIILKELCKVLKPFETVTVEISSEKQVTLSKVILKRISTHEFTRKSRFKRPDEKVWYECAQCSYKTHRKWYLKRHMVIHREKMEVDIQEFHCPKCPFKTLLKDSLKRHSLRHENPDNKVWYECAQCSHKTLRKDNLKKHQIVHRQTNIQMFHCSECSFKSHSKVCLKQHSIKHKKPDEKAWYVCTQCSFKTVRKETIQKHQIVHRKTRKFHCSECAYKTHSEIYLKAHLARHNPDGKGRRQSAMEVSLSVVTPVSVKEEDLEYKYEQSHSDNKESAMEISLLMETPILIKMEDLESKYIQSDNTDNDNRESTMEESSLGKAPVLVKEEDLEFKYELSNCDNRYEVDSDVYFTNKTEMGDIKTESEDLELDNENLSKSYINNGGHMVDIDDHTNDSDVKVRKYSEEYLNESYSIKHEEINIECEDEEDSSEGSPSPEPIYSSDGKRLNTREFRTRKRLEEERHNLVLKMQSINPEFKPPADYKISKDKLTRKSRIRVKSHKCPHCTYQTVSHYHIRRHSIIHKRPDKKVWYECVQCSFKTGWKDTLKKHQTVHTQTVIRRFQCTECPHKSKSKYNLKLHSLRHKKAYEKMWYECAQCSFKTDRKGTLTNHQIVHRQTDSQRFHCRECTYKTHSKDYLKLHSIIHKKPNEKVWYECAHCSYKTDQRSNLRRHIGNHRDQMGSAKNIQKFHCPECPFKTHLKRSLRQHSVIHKKPEEKLWYNCANCLFNTIRKASLKRHVMLHNIEVRHKNLDEKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00848908;
90% Identity: iTF_00848908;
80% Identity: iTF_00848908;