Kmac093977.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- X-element\ORF2
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010004128.1:347175-356733[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.7 4.3e+02 4.6 0.2 1 17 1099 1115 1099 1116 0.91 2 13 4.4e-05 0.011 19.0 0.9 1 23 1130 1152 1130 1152 0.97 3 13 0.38 96 6.6 1.7 1 23 1161 1183 1161 1183 0.98 4 13 0.044 11 9.6 2.4 1 23 1192 1214 1192 1214 0.95 5 13 0.01 2.6 11.6 1.2 1 23 1223 1245 1223 1245 0.97 6 13 0.00032 0.081 16.3 0.4 1 23 1257 1279 1257 1279 0.97 7 13 0.00032 0.081 16.3 0.4 1 23 1288 1310 1288 1310 0.97 8 13 0.23 58 7.3 0.1 1 23 1319 1341 1319 1341 0.93 9 13 0.026 6.7 10.3 3.0 1 23 1350 1372 1350 1372 0.96 10 13 0.064 16 9.0 0.2 2 23 1382 1403 1381 1403 0.96 11 13 0.00038 0.095 16.1 1.8 1 23 1412 1434 1412 1434 0.98 12 13 9.6 2.4e+03 2.2 5.5 1 23 1442 1464 1442 1464 0.96 13 13 0.0059 1.5 12.3 2.9 1 23 1473 1496 1473 1496 0.98
Sequence Information
- Coding Sequence
- ATGGCGGCGAATGATTTGTCGTGTGAAAAGTACGAGCGCAAGAAAAGTGAAAAAAGTAGCAAAGTAAATTGTTTACATTGTAAAAAAACATGTGAGATGCCTACAAAGTGCATAAAGtgtgaagaaaattttcatccttCGTGTTTGAAACAAGCTGCGGCCAAAAAATCGGCAATTTGTGTTCATCAAGTAGCAGCCATGACACCAACAGAGGTGGATGAAGAAACCCAAAAAGACTTGGAAATAGGCTATCTGAAACGTTTAAACCTAGTACTtgaggaaaaaaacaaaattcttgagGAAAATAACGAATTACTTAGAGAAAAGGTGGAAATCCTGACGACAAACGGAAAtttatccaatataaaaaaaggtaaacaaatccCCCTCTTACGCCCACCCCCTCAGGTCACGTCACCGAAATCGATTCCTTCTCCGAAATCGATCTCTTCTCCTAGAAAACAGAAactagtagttcctaaaaaaccAACAGAGGGCAGCACAAAATCTCATGATCGCCAACCTAAGGAAAATTCAAAATCTCAAAAGATTTTGGAGTCCGAAAGCACGGCCGCGGGACAAGAGACAGAACCAAAGTCAAATATGACAATTGATGATGACGTTTTTGAGGTTAAAACTAAAACTGATGGAAACAAAtcagaaaaacagaaaaataaaaatcttcaagATCCAATTTCCCAAAATGTGGGAGAAAGTGAATGGAAAATTGTCCAGGGCagaaaaaagaagcaaaaaattgATGTGAACTTAAGACCCGCCCCAGTTAAAGGGAAAAACGAAAATGCCATGGAACTACAAGCAGCAAATCAAAACTGTTTCTGGTTGTTTCTGACAGGGCTTGCCATCTCAACAACGCCTCTTCAGATAAAAACCTACctaaaaaataatggtattacAGACTCTACATGTGAAATTCTTAAAACCAAACAAGAAAAAAGGTACACCTCTTTTAAAGTTAGTGTACCCTTAGAAAATAAGGATATGGTTCTAGATGCAAATTTATGGCCCAAAGGTGTCTCTGTCATAAGGAACAAAATTCATCAGCTTGAAGCGGCATTAGACGAAGATTCCTCCGATATTGTATGCCTAACGGAACATTGGTTGACCGCGGATGAGATAAATGCCTTTagccttcaaaattataaaattgcagGATGCTCTGTGCGAACACAATCTCATGGTGGAGGGAGTTTGACACCTGGGGGTGACTTTGACACTTTCCTCTCTACACTGGAGGAAGTTATAAGTAGCATTGGCCCGGGAAAAGATACTGTACTGGCAGGCGATTTTAATGTGTTATTTGGCACCGGTCAGGGAAATTGTGTCACTCTTCTTGACCTGTTGGGGACCTACGaGGGTTCTTCCTGGGAGTTTGTGGATCGCACGGATATCAATACTGAGGGGAAGTTTCGGGTCCTGATGGATTTGCTGGAGGGTGCATATCTGCAGTGTTTTCCTGAGAAGAAGTATAATGTGCGTACAGATCAGGGTGGCAGGGTAAGTTGGTTTGACGATGTCCTTAAGGACATGAGAGAACATCTGAATCTGTTGTATGATGTATGCAAGCAGTACAATCGGGTGAATGATTGGGAAGagtataaaagatataaaaaatattatcgggCCGCCATTGTGGAAGCAAGGAGGTTTGCAAATGACAGAGCTATAAACTCTTCAAGTAACCCAGGGAAGTgcatgtggcaaattataaatcaaaaaaggGGTAATACAAAAAAAGGGGACCAGCACATCAATTGTCATATTCCACCACAAGAATTTAACGACTTTTTTGTGGGAATTGCCCATAACTTAATTAAAGATATGCCACATGCTACTAAAGATCCCCTGCTATACCTAAATGATATTAGTACTTCTTATGATGAGTTTAATTATCAGGAGGTCACTTTTGTACAAATGAGGGACACTAtcgctaaattaaaaaataaaaaaagtgctgACATATTCGGGTTGACAGTTGaacttttaaaatcaataaaaaatataatctatatTCCTCTCACTAAACTTTTCAAGCATTGTGTCCGAGAGTGTAACTTTCCTTTAGTCTTGAAACGGGCCTTAATAACACCagtatttaaaaaaggagacaaagtTCTTGTcacaaattaccgacctatatcCTTGCTTCCGATTGTATCAAAGGTATTTGAGAAAATCATGGCAGCACAAATTGTAGAACTATTTGAGACACGCGGACTGTTTAGCAATAGACAGTTTGGTTTCCGGAGAGGTAAGAGCACCATTCTGGGGGTTCTGGATCTTTTGGAGGGGATAATGGACTCTTTTGAGAGCCGAGAGTACTTTGATGCCCTATTTTGTGACCTGAGtaaagcatttgactgtgtcACACACAATCTCTTGTTAAAGAAACTGAAACTTTACAAGTTCAGTGAAAACAGCATTAAATTGACACAGTCATATCTCGATGAACGTTACCAAACTGTTCGGGTAAATGGTAGGTTGTCCGAGGCATCGCTCTTGGACataggtgttccacagggatcggtgctcgGACCCATTCTATTTCTCATTTACATTAATGACTTGCCACATAGCTGTGCGGATGCTAAGTTTGTGctgtttgcggatgatacaacggTGTCTGTGGCTGGGAGGACTGAGTGGGAGGCTGCGGATAGGCTGGATCTGGGACGTGTGGTTGTGGAGGACTGGTTTTTGTCGAACCGTCTGCTGCTGAACGCTGATAAAACGCAGAACATCATGTTTTCATTAAGAGATCTTAAGGATCACCATCCCAATTCTGTCAGATTTCTGGGGATTCATCTTGACTCCAGACTTACGTGGGAATCCCAGGTGGAGGTGGTGAGTAGCAAACTCCGAACAAGTGTTTTTGTGCTGAGAAATTTGGTAGGGTGTGTGTCACAAGAGtcgctaaaaactgcttattatgcaATATTTCATAGTGTAATGATCTACGGAATAATTGCTTGGGGAGGCTCGACACATTCTGCTAGAGTATTTGGGTTACAGAGGAGGGCGGTGAGACTTTTGACTGGGATTGGATACAGGGAGGACTGCAGGGCTGCTTTCTCGGAACTGGGCATACTGACTTTCCCCTCGGTATACATATTAGAACATTTACTTAATGTAAAACGCAGTGAAGAAGATTATAAGACTCATGAGGATGTACATAACTATGAAACCAGGAACAGACATCACCTGGTAACATCTTACTGTAGACTGGGAAAgATAGCCGAAATATCCCAAAAGTTATCATGTAAAGTTCAGATGCATAAATGTCCAGAGTGTCCTTATGAACCAACTCAAAAGAGTAACCTTACGCTGCCTTCAATAAGAGAGAAGAAACCAGATGAAATTATATGGTATGAATGTCCAGACTGTCCTTACAAATCAACTCAGAAGAGTAACCTTAAACAGCATTCAATCAAACATAAGAAGCAAAATGAGATTTTATGGTATGAATGTTCAGAGTGTCCTTTCAAATCAGCTCACAAGGGTGTTCTCAAATATCATTCGAACAGACATAAAAACCCAAATGAAATTGAATGGTATAAATGTGCAGAATGTCCTTACCAATCAGCTAAGAAGAATCACCTCAAACGGCATTCGGTCAGACATAAAAAGCCAAACGAAATTGTATGGTTTGAATGTCCAGAGTGTCCTTTCAAATCCGCTCACAAGAGTGTCCTCAAAAGGCATTCGATCAGACATAAAACGCCAAAATCCCCAAATGAAATTGTGTGGTACAAATGCCCAGAGTGTCCTTACAAAGCAACTCAGAAGGGTAACCTTACTCAGCATTCAATCAAACATAAAAAGCCAAATGATATTGTATGGTATAAATGTCCAGAGTGCCCTTACAAAGCAACTCAGAAGGGCAACCTTACTCAGCATTCGATCAAACATAAAAAGCCAGGTGAAATTGTATGGTATGAATGTCCAGACTGTCCTTACAAGGCAACCCTAAAGGGTAATGTTATGCAGCATTCGGTCAGACATAGAAAGCCAAACGAAATTGATTGGCACCACTGTCCAGAGTGTTCTTTCAAGGCAATTAATAAGAGTGATCTTAAAAAGCATTGGATCAGacataaaaagttaaatgaaattGCATGGAATAAATGTCCAGAGTGTCCTTACAAAGCAATTAATAAGATTGGTCTTAAAAAGCATTCGATCAGACATAAAAAACCAACTGAACTTGTGTGGTATGAATGTTCCCAATGCCCTTACAAAACTAAACGGAAGCAAGATTTAAGAGTCCATCAGCTGAAACATGAAAGCGCCACTGTTAACTGGTACTTCTGTTTCTCGTGCTCCTACAAAACTGTCCACAAATGTGCCTTAAAAGCTCACTTAGTTCGGCATAAAAGTGGCGAGCAAATTAATTGGTTCAGTTGCTCAGAATGTGAGTTTAAGAGCAAGTATAAAGTTAGTTTAAGGAAGCATCAAAACACAAATCACAAAGTTAAAAGTGAtgatcacaatttaaaaaaaaacaatgcttaa
- Protein Sequence
- MAANDLSCEKYERKKSEKSSKVNCLHCKKTCEMPTKCIKCEENFHPSCLKQAAAKKSAICVHQVAAMTPTEVDEETQKDLEIGYLKRLNLVLEEKNKILEENNELLREKVEILTTNGNLSNIKKGKQIPLLRPPPQVTSPKSIPSPKSISSPRKQKLVVPKKPTEGSTKSHDRQPKENSKSQKILESESTAAGQETEPKSNMTIDDDVFEVKTKTDGNKSEKQKNKNLQDPISQNVGESEWKIVQGRKKKQKIDVNLRPAPVKGKNENAMELQAANQNCFWLFLTGLAISTTPLQIKTYLKNNGITDSTCEILKTKQEKRYTSFKVSVPLENKDMVLDANLWPKGVSVIRNKIHQLEAALDEDSSDIVCLTEHWLTADEINAFSLQNYKIAGCSVRTQSHGGGSLTPGGDFDTFLSTLEEVISSIGPGKDTVLAGDFNVLFGTGQGNCVTLLDLLGTYEGSSWEFVDRTDINTEGKFRVLMDLLEGAYLQCFPEKKYNVRTDQGGRVSWFDDVLKDMREHLNLLYDVCKQYNRVNDWEEYKRYKKYYRAAIVEARRFANDRAINSSSNPGKCMWQIINQKRGNTKKGDQHINCHIPPQEFNDFFVGIAHNLIKDMPHATKDPLLYLNDISTSYDEFNYQEVTFVQMRDTIAKLKNKKSADIFGLTVELLKSIKNIIYIPLTKLFKHCVRECNFPLVLKRALITPVFKKGDKVLVTNYRPISLLPIVSKVFEKIMAAQIVELFETRGLFSNRQFGFRRGKSTILGVLDLLEGIMDSFESREYFDALFCDLSKAFDCVTHNLLLKKLKLYKFSENSIKLTQSYLDERYQTVRVNGRLSEASLLDIGVPQGSVLGPILFLIYINDLPHSCADAKFVLFADDTTVSVAGRTEWEAADRLDLGRVVVEDWFLSNRLLLNADKTQNIMFSLRDLKDHHPNSVRFLGIHLDSRLTWESQVEVVSSKLRTSVFVLRNLVGCVSQESLKTAYYAIFHSVMIYGIIAWGGSTHSARVFGLQRRAVRLLTGIGYREDCRAAFSELGILTFPSVYILEHLLNVKRSEEDYKTHEDVHNYETRNRHHLVTSYCRLGKIAEISQKLSCKVQMHKCPECPYEPTQKSNLTLPSIREKKPDEIIWYECPDCPYKSTQKSNLKQHSIKHKKQNEILWYECSECPFKSAHKGVLKYHSNRHKNPNEIEWYKCAECPYQSAKKNHLKRHSVRHKKPNEIVWFECPECPFKSAHKSVLKRHSIRHKTPKSPNEIVWYKCPECPYKATQKGNLTQHSIKHKKPNDIVWYKCPECPYKATQKGNLTQHSIKHKKPGEIVWYECPDCPYKATLKGNVMQHSVRHRKPNEIDWHHCPECSFKAINKSDLKKHWIRHKKLNEIAWNKCPECPYKAINKIGLKKHSIRHKKPTELVWYECSQCPYKTKRKQDLRVHQLKHESATVNWYFCFSCSYKTVHKCALKAHLVRHKSGEQINWFSCSECEFKSKYKVSLRKHQNTNHKVKSDDHNLKKNNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -