Basic Information

Insect: Kuschelorhynchus macadamiae
Gene Symbol: -
Assembly: GCA_030620095.1
Location: JAUTXW010004949.1:49974-91524[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.7 1.8e+02 5.8 0.9 3 20 6 24 4 26 0.85

2 15 4.1 1.1e+03 3.3 0.2 3 21 33 51 32 52 0.93

3 15 0.3 77 6.9 0.3 1 12 131 142 131 151 0.83

4 15 0.27 67 7.1 5.2 1 19 272 290 272 293 0.92

5 15 0.018 4.7 10.7 0.3 1 23 321 343 321 343 0.99

6 15 0.00067 0.17 15.3 2.5 1 23 362 384 362 384 0.97

7 15 0.049 12 9.4 0.7 1 23 567 588 567 588 0.89

8 15 0.0013 0.32 14.4 0.6 1 23 594 616 594 616 0.96

9 15 0.0095 2.4 11.7 0.3 1 21 622 642 622 643 0.93

10 15 0.00055 0.14 15.6 1.7 1 23 650 672 650 672 0.98

11 15 3e-05 0.0076 19.5 2.1 1 23 678 700 678 700 0.98

12 15 0.00034 0.086 16.2 12.3 1 23 706 728 706 728 0.99

13 15 0.00044 0.11 15.8 0.2 1 21 734 754 734 755 0.94

14 15 7.2e-05 0.018 18.3 0.2 1 23 1106 1128 1106 1128 0.98

15 15 0.00038 0.095 16.1 0.1 1 23 1136 1159 1136 1159 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.7	1.8e+02	5.8	0.9	3	20	6	24	4	26	0.85
2	15	4.1	1.1e+03	3.3	0.2	3	21	33	51	32	52	0.93
3	15	0.3	77	6.9	0.3	1	12	131	142	131	151	0.83
4	15	0.27	67	7.1	5.2	1	19	272	290	272	293	0.92
5	15	0.018	4.7	10.7	0.3	1	23	321	343	321	343	0.99
6	15	0.00067	0.17	15.3	2.5	1	23	362	384	362	384	0.97
7	15	0.049	12	9.4	0.7	1	23	567	588	567	588	0.89
8	15	0.0013	0.32	14.4	0.6	1	23	594	616	594	616	0.96
9	15	0.0095	2.4	11.7	0.3	1	21	622	642	622	643	0.93
10	15	0.00055	0.14	15.6	1.7	1	23	650	672	650	672	0.98
11	15	3e-05	0.0076	19.5	2.1	1	23	678	700	678	700	0.98
12	15	0.00034	0.086	16.2	12.3	1	23	706	728	706	728	0.99
13	15	0.00044	0.11	15.8	0.2	1	21	734	754	734	755	0.94
14	15	7.2e-05	0.018	18.3	0.2	1	23	1106	1128	1106	1128	0.98
15	15	0.00038	0.095	16.1	0.1	1	23	1136	1159	1136	1159	0.95

Sequence Information

Coding Sequence: ATGGCGCCATTAAGTTGTCCACTGTGTTGTAACGAGACATTTCCTtctcatatttctttaaaacatcATATTGCGGTTATGATGGATAATTTATTGTGCCCCTCATGCAATGAAAAGTGTGAGGATTTAATGGACTTGGCAGATCATTTAGAAAGGGAATGTGTTAATTTACAAAAGTGCAGTGACCCTGTTAAAGATTCAGATGCAAACACTCACCTAACGGAGCTACAAGAATCTCATAAGGATTCTGTAGGTGAGGAACTTAATATGTATAATGttaaacaagaagtagaagaaATTCCGGCAACAGGTACCAGTGCTGATAAAGAAACAGCTAATAACACAAAAGCTCTGGATCAGAGTGAAATTCGAGATGATCCAAATATGATATACACTTGTGAAATGTGTGATATGACATTCTCTTCAGTACAAGAACATTTAGCGAAGTATCACGAAGGGGAGGAAGTTTTGTTGGAAACTGAAGGACACGAAGAGATGGCTGGTACCCAAGAAGATGATGCATTTGGCTATGATGGTCAGACCGATGATGAAATGTTTGATGGAGCAAGCATGGGTGGAAGTCTAGATGAATCTTCTGAAAGgatCAACAATATCACTATGGATGAAACTGCAGTCAACAAGGATGGAATGCCTCACATAAAAGAAGAAACTGATTTGACTAAAGAGAAGCAAAATGAAAACATAGATACTGGTCCTGTTACGACTAAATATATTGTTGAAGATGgaaaagtTCGTAAAATTACTGAGGAGGAGGCTGCAGAAATTTCTGATCAGACACGGATTATCGAGATACATAATTGTCCTAACTGCAATCTACAATTTCCCAATATGTCCCATTTTAAGAAGCATAACTGCAGTAATGCTAAGAAAATTGCAAGTAAAATGACAGAAAAGAtagaaaggaaacaaaaaatggATAAAataaaagaAGAATTTCGATATCAATGTACATTTTGCCTAGCAATCTATTCCAGCTTAATAGGACTGAATGACCACATGAAGTCACATTTAGTTCAGGATGAGTCTgGAATGGTTCAGAGGAAAACTATTACAATGACACTTCATGTCTGCGATATTTGCAATACTAAATTTCCCACCTACAAACAGCTGCGACTGCATTCGAGGATGCATGAACCTATTAAAGCAAAGCAGGATTGCGAGGAAACATTAACTCGTTGCTTATATCCTTCCTCTCTGACTGACAATTTGCTGTCAAAATTGGAAAATGGATCTGTGCCAACTTTAACCAAGATACTGGCGCTCCTCAAGGAAGTATTCTCTTATGCTGACTTCTCTAAGGCTTTTGATAGGGTTGATCACTCATTGTTAGTAGATAAACTGTCAAAGTATGGAGTGCGTGGCTCTCTGCTATCATGGTTGTACTCCTATCTGGTTGGTAGACAGCAGTTTGTAAAAGTTAAGATGTACTTGTCAGATCAGCTTATTGTTActtctggagtgcctcaggGATGGTGCTACTTTAATAAAGTTATGGTCAATTCCAAGACTCCATTTATGAGCATTAGAACTTTAAGAAAAGACCCCTGTGAACTTAATTCATATTTTGATGGACATAAATTTGAAACAGCTTCATTTgtTGAGCCACCGGTGTCTTACAACATGATGGGTCAGCATAATGATGAGAATGCAGAGCCTGGAGATGTGGAACGGGAAAATTTTGAATGTACGATTTGTGGAAAATCATACGATAAGGGATATGAGGAGGTTCATATGAAATTCCACGAGGAACAGGAACAGTTCATTTGTCTAGTCTGTAATCGAAAATTTGATTCTAAAGATAATTTAGACCTGCATACTAAAGcacATACCAGTACTAAAAAGTTTTCCTGTTCATATTGTAAAAAGCTGTTTAACAATTACGGTGCCCTAGAAGATCATGTTCTTAAACAGTGCCAAAAAAGGGATTTTGAATGTCAGTACTGTGGAAGAAGATTTGGAAGACCTCATGAAAAGGTCAAGCATGAGCGAATTCACACAGGAGAAAAGCCACACGTGTGCGAGATATGTGGTAAAGCTTTCAGAGTCGGGTATTGCCTTACGTTACACATGCGCACTCATACAGGAAATAGACCGTATACTTGTCACCATTGTGGGAAAAGGTTCAAATCTCATAGCGTTTTTAATCATCACATGAAAACTCATTCTGACGATCGAAATTACAAGTGCCCTTTTTGTCCTAAAGCTTTTAAGACTGCAGTGCAACTATCTGGGCATAAAAACAGGTTGCTCCTGTCAAACCAATTTGagcttattcttattattattattgattctTATTTCTCGAATTTTTTGGCGGCTGCTCTCGATGGTGGTTTGCAAGTCGACGCAGACCCATTTGTGGTTAAATCTGGGGTTTCACAAGGATCCCACTTGGGGCCAATCCTATTCCTTCTGTTTATTAATGACTTGGGGCTTATATTCaaacattgtcattttttattcttTGCAGACAATCTTAAAATTTACCGTGTTATCAGAAATACCAATGACTGTAGTCTTTTGCAGGATATCAACAGTTTGGATTCATGGTGCATTGAAAATCATTTACAGCTAAACGTGgcgaaatataaaattatttcatttagcaGACAGAAATCTCCAGTCTTGGAATCATATAGCATCAGTGGCTGTGGGCTCGAATGGGTAAATTTGGTGAATGATCTGGGAGTTTTGTTTGACAGCAAGTTGAGATTTGTGCAACACATTAATTGGGTCACTGCAAAGGCATTCAAGATGCCGGGTTTTATTAAACGACAGTGCTCCGACTTTAGGAGCTCAGAAGtgttgaaaatgctttttatttcattagttcgAAGTCTTCTCGACTACTGCTGTAACGtctggtcgccattttatcggaTTCACATCTCACGAATTGAAAGAGTTCAGATGAGGTTtgtcaactttttgctttttaaacttcatttaaaCAGATCGGTGCTAAGACATGGCGAACGTTTGGCAATGTTTGGTCTAGAAACTCTGGAGCATCGTCGGATAAGACTAACCCTATCATTTGGCCACAAACTCCTCATTGGTCAGATTGATTATCCTGAGCTATtggcattgcttaattttaaaGCGCTGTACTCACCCGAGCTGGGATCAGCTTTGGTTCAAGAATGTGGTGACAGGCTGGAGCAGTTGGCACGGAGTAAGATGGTGAGGTTGGTTTCGGTGTCGGGGCATTATGAGATTGAGGGTAACGAGAACGTAGATGAGCTTGCTAGACTCATATGTGAGATCAGAACCAGCTTCAGTCATACAAAACCATTTTCGTGCACAGAATGTAATCGACCCTTCGCCTCGTTGTACGCTGTTAAAGCTCACATGGAGACCCATAAAAGGGACAATAATCTTAAGTTTAAATGTTGGATATGTGGTGCTAAATATGCTAGATCGTTTGCACTTAGAGATCACATGAGCGAAGCTCATGTCCAAGGTGATAATGCTTCAAAGCAGCTTGAAGAGGCGGTAATGGGGTTAGAAGAGGTGACGCAGGACCAGCTGGAAAATGCTGAACATCAGATTGTCTCTGAGGAGCAGACTGTAGAAACACAAGGTCATCAGATAACTGTCGAGGAAGAAGAATACCAAATCACGGgtGCTGAAGCTGAAATGTGTCAAGTACAAGTCTTAGAAGATGCAGGCGAAGGAGAAGGTTACGTAGTCCACATACAAGATGTAGGACCTAGTGAACCGATAGAAGAAAATCACATGGAAGTAGTTGAGGCATAG
Protein Sequence: MAPLSCPLCCNETFPSHISLKHHIAVMMDNLLCPSCNEKCEDLMDLADHLERECVNLQKCSDPVKDSDANTHLTELQESHKDSVGEELNMYNVKQEVEEIPATGTSADKETANNTKALDQSEIRDDPNMIYTCEMCDMTFSSVQEHLAKYHEGEEVLLETEGHEEMAGTQEDDAFGYDGQTDDEMFDGASMGGSLDESSERINNITMDETAVNKDGMPHIKEETDLTKEKQNENIDTGPVTTKYIVEDGKVRKITEEEAAEISDQTRIIEIHNCPNCNLQFPNMSHFKKHNCSNAKKIASKMTEKIERKQKMDKIKEEFRYQCTFCLAIYSSLIGLNDHMKSHLVQDESGMVQRKTITMTLHVCDICNTKFPTYKQLRLHSRMHEPIKAKQDCEETLTRCLYPSSLTDNLLSKLENGSVPTLTKILALLKEVFSYADFSKAFDRVDHSLLVDKLSKYGVRGSLLSWLYSYLVGRQQFVKVKMYLSDQLIVTSGVPQGWCYFNKVMVNSKTPFMSIRTLRKDPCELNSYFDGHKFETASFVEPPVSYNMMGQHNDENAEPGDVERENFECTICGKSYDKGYEEVHMKFHEEQEQFICLVCNRKFDSKDNLDLHTKAHTSTKKFSCSYCKKLFNNYGALEDHVLKQCQKRDFECQYCGRRFGRPHEKVKHERIHTGEKPHVCEICGKAFRVGYCLTLHMRTHTGNRPYTCHHCGKRFKSHSVFNHHMKTHSDDRNYKCPFCPKAFKTAVQLSGHKNRLLLSNQFELILIIIIDSYFSNFLAAALDGGLQVDADPFVVKSGVSQGSHLGPILFLLFINDLGLIFKHCHFLFFADNLKIYRVIRNTNDCSLLQDINSLDSWCIENHLQLNVAKYKIISFSRQKSPVLESYSISGCGLEWVNLVNDLGVLFDSKLRFVQHINWVTAKAFKMPGFIKRQCSDFRSSEVLKMLFISLVRSLLDYCCNVWSPFYRIHISRIERVQMRFVNFLLFKLHLNRSVLRHGERLAMFGLETLEHRRIRLTLSFGHKLLIGQIDYPELLALLNFKALYSPELGSALVQECGDRLEQLARSKMVRLVSVSGHYEIEGNENVDELARLICEIRTSFSHTKPFSCTECNRPFASLYAVKAHMETHKRDNNLKFKCWICGAKYARSFALRDHMSEAHVQGDNASKQLEEAVMGLEEVTQDQLENAEHQIVSEEQTVETQGHQITVEEEEYQITGAEAEMCQVQVLEDAGEGEGYVVHIQDVGPSEPIEENHMEVVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -