Basic Information

Insect: Kuschelorhynchus macadamiae
Gene Symbol: -
Assembly: GCA_030620095.1
Location: JAUTXW010001585.1:294698-309327[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0019 0.48 13.9 0.5 1 19 235 253 235 256 0.94

2 10 0.0062 1.6 12.2 1.4 1 23 268 290 268 290 0.98

3 10 8.1e-05 0.02 18.2 1.0 2 23 345 367 344 367 0.92

4 10 2.2 5.6e+02 4.2 0.1 1 19 430 448 430 451 0.79

5 10 3.4e-05 0.0088 19.3 2.2 2 23 479 500 478 500 0.96

6 10 1.3e-05 0.0033 20.7 1.0 1 23 506 528 506 528 0.98

7 10 1.3e-05 0.0032 20.7 1.1 1 23 534 557 534 557 0.96

8 10 1.6e-07 4e-05 26.7 0.6 1 23 563 585 563 585 0.99

9 10 4.2e-07 0.00011 25.3 2.1 1 23 591 613 591 613 0.99

10 10 0.00042 0.11 15.9 2.2 1 23 619 641 619 641 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0019	0.48	13.9	0.5	1	19	235	253	235	256	0.94
2	10	0.0062	1.6	12.2	1.4	1	23	268	290	268	290	0.98
3	10	8.1e-05	0.02	18.2	1.0	2	23	345	367	344	367	0.92
4	10	2.2	5.6e+02	4.2	0.1	1	19	430	448	430	451	0.79
5	10	3.4e-05	0.0088	19.3	2.2	2	23	479	500	478	500	0.96
6	10	1.3e-05	0.0033	20.7	1.0	1	23	506	528	506	528	0.98
7	10	1.3e-05	0.0032	20.7	1.1	1	23	534	557	534	557	0.96
8	10	1.6e-07	4e-05	26.7	0.6	1	23	563	585	563	585	0.99
9	10	4.2e-07	0.00011	25.3	2.1	1	23	591	613	591	613	0.99
10	10	0.00042	0.11	15.9	2.2	1	23	619	641	619	641	0.97

Sequence Information

Coding Sequence: ATGGAAAACGCAGAGGGAcgagaaattttagaaaacgtAGTTATAACTTCTGAGGGAGCAGATGGACCTCAGTATATTAGGTTGACTGAAAATTCCCAGATTATCAGTTCCGAACTTTTACAAAATCACAATGGTCTTGTTGTTGACCTAGGAGGAAATGATTTTATTCCAGTAGCATACAGtTCAGAGGATATTTTGACTCAAGAATTAACTGAAGAAGATCGGAATCTTGCTGCAGCTCTGGTGGCTGTTCAGCTTAGTCAACAGCAAAAGCAACAGCAATTGCAAGATGCTGCACTGCCTCCTCTTATTGctGGAAACAAGATTTTAGAAGAACATCAACAGCTTATCCTTACCCAGGACAAAGCGACTGGCAACCCACAATACTTGAAAATTGTCAATTCTGACAACATATACATAGATCAACAGGGGATGCATAAGATAGTGGAAAATGTTAGAATTGTCGATGACACAGATCAAAACCTCCCAATTCAAACTGTACATGCAGTTGAAGATGAACCACATCACATTCATGTCAATGATAGCAAGATTGAAATTATAGAGAGGGAAGATGATGATGAAAAACTTGATTCTGACAGAGAATCTCTCAGaaatgatcATCGTTCTTCCAAGAAATCTTTGCCACACAAGAAAAGGATCAGCAGAAAGTTAAGAAAGAATAGCACTATTGCAACCAAGAAATACAGCTGCTCTTTTTGCAATGCATCTTTTACCAATAATGATGAATACCAGCAACATGAGGGCACTTGCAATGCAGCCAAACTACCTGTTAATTCCCCATTTTCCTGCCAGTTATGTAATACACCTTTTGCGGATCAGTTGAAATTTTTTGAACATCTTAAAAAACATTATGAGCCTGGAGGCATTGCTGGTCCTCCACTAACACAAACACCCGTTGCTCCTCCACAACcagaagaaaagaagaaaaaagcaTCACCTCCCAAACAAGAGAAGAAAGTACTAGAAGAAAAAGAGCCTCAGGAAACGTTATTGTCCAGTTTGCTTAGTTTGCAATGCATTGAATGCAATAAGACATTTAGACGCCAGAAAACGTTTGAAGCTCACATGCGGGATGTACATAGCAACAAACCTGAACCAGAAGATGAATTCTCTGACGCAGAGGACATGATGGCAGGAATCGACGTAGCGGTTGATTATGACAGTATTCACGGAGATGATCATGAAGATGACAGCAAAGCCTGGTACCAGGAGGAAGAACTCCATCAAACCGAAAAAGACCTTGAGGAATTAGAGGACAAAAATGAGCATGTTTGTCATTTATGCAAACAACCATTTGCTCTCAGAGCTATCCTGCTGCAGCACTTGGTCACTTGCCGGGTAACCAGTGGAATGACTGAACCCACGCCTGCAGTCATTGTTCGCAGAAGGAATAAGAAAATCAAGGAAAAACTGAATTGTGAACTCTGTGATAGAGTTTTCAAACATAGGAACTCTTTAGTGTACCACATGAGGAGCCACAGTGGAGTGAGACCTCACCAATGCGAGCTTTGTGGGAAAAGCTTCTTTGCTTCGAGTGCACTAAAAGttcatttAAGATTACATTCAGGAGACAAACCTTACGATTGTGTTCATTGTGGAAGAAAATTCAGACAGTGGGGTGacttaaaatatcatattactTCTATTCATTCGACAGAAAAGAACTATCAATGTGAATACTGTGGTAAAGAGTTTGCAAGGAAATATTCACTAGTGGTGCATAGAAGAATCCATACAGGTGAGCGTAACTACAAGTGTGAGTACTGTGGAAAAACTTTCAGAGCATCGTCATACCTTCAGAATCATAGAAAGATTCATACTGGTGAGAAACCCCATAACTGTTCTATCTGTGCAAAACCATTTAGAGTACGATCGGATATGAAAAGGCATGAAAAAACTCATGGAAAAATGGCAACACCTAGGGGTGCAGCAAAGGCTCAAGTGCAACAGGTGCAAACACCGGAGTTCAAAGTGCATAAAGATGAGGTTGAAGATAATGATGAATCTAACGAATTGCATATTGGTGAGGAGGAAGAGGCGGCAGAACATATTTTGGGATATGAGCAGCAGGAAATTGAGATGATGAGTGGCACAGCCATAACTAAGAGAAATTTATACACAAATGGTCATGAATTATTTTTGGTCACATATCCAAATGAAATGGTACCAAGAAGTGCAGGCAATACAGAGACATGGATCCATACCAGTAATGCTTGA
Protein Sequence: MENAEGREILENVVITSEGADGPQYIRLTENSQIISSELLQNHNGLVVDLGGNDFIPVAYSSEDILTQELTEEDRNLAAALVAVQLSQQQKQQQLQDAALPPLIAGNKILEEHQQLILTQDKATGNPQYLKIVNSDNIYIDQQGMHKIVENVRIVDDTDQNLPIQTVHAVEDEPHHIHVNDSKIEIIEREDDDEKLDSDRESLRNDHRSSKKSLPHKKRISRKLRKNSTIATKKYSCSFCNASFTNNDEYQQHEGTCNAAKLPVNSPFSCQLCNTPFADQLKFFEHLKKHYEPGGIAGPPLTQTPVAPPQPEEKKKKASPPKQEKKVLEEKEPQETLLSSLLSLQCIECNKTFRRQKTFEAHMRDVHSNKPEPEDEFSDAEDMMAGIDVAVDYDSIHGDDHEDDSKAWYQEEELHQTEKDLEELEDKNEHVCHLCKQPFALRAILLQHLVTCRVTSGMTEPTPAVIVRRRNKKIKEKLNCELCDRVFKHRNSLVYHMRSHSGVRPHQCELCGKSFFASSALKVHLRLHSGDKPYDCVHCGRKFRQWGDLKYHITSIHSTEKNYQCEYCGKEFARKYSLVVHRRIHTGERNYKCEYCGKTFRASSYLQNHRKIHTGEKPHNCSICAKPFRVRSDMKRHEKTHGKMATPRGAAKAQVQQVQTPEFKVHKDEVEDNDESNELHIGEEEEAAEHILGYEQQEIEMMSGTAITKRNLYTNGHELFLVTYPNEMVPRSAGNTETWIHTSNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01244462;
90% Identity: -
80% Identity: -