Basic Information

Insect: Kuschelorhynchus macadamiae
Gene Symbol: -
Assembly: GCA_030620095.1
Location: JAUTXW010000653.1:191808-209207[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.012 3 11.3 2.2 1 23 270 292 270 292 0.96

2 26 0.0073 1.9 12.0 0.8 1 23 301 323 301 323 0.98

3 26 0.032 8.2 10.0 0.5 1 23 329 351 329 351 0.97

4 26 0.0073 1.9 12.0 1.7 1 23 359 381 359 381 0.95

5 26 0.045 11 9.5 0.8 2 23 391 412 390 412 0.96

6 26 0.0031 0.78 13.2 0.7 1 23 421 443 421 443 0.97

7 26 0.00062 0.16 15.4 0.6 1 23 449 471 449 471 0.96

8 26 0.51 1.3e+02 6.2 0.5 1 23 479 501 479 501 0.94

9 26 0.0039 0.98 12.9 0.8 1 23 509 531 509 531 0.97

10 26 0.002 0.51 13.8 1.2 1 23 540 562 540 562 0.97

11 26 0.086 22 8.6 1.6 1 23 571 593 571 593 0.96

12 26 3.8e-05 0.0098 19.2 0.6 1 23 599 621 599 621 0.99

13 26 0.0069 1.8 12.1 3.8 1 23 896 918 896 918 0.97

14 26 0.0042 1.1 12.8 1.2 1 23 927 949 927 949 0.98

15 26 0.17 44 7.7 0.7 1 23 955 977 955 977 0.94

16 26 0.0073 1.9 12.0 1.7 1 23 985 1007 985 1007 0.95

17 26 0.12 31 8.2 1.1 2 23 1017 1038 1016 1038 0.94

18 26 0.00039 0.099 16.0 2.3 1 23 1047 1069 1047 1069 0.97

19 26 0.0014 0.34 14.3 1.1 1 23 1075 1097 1075 1097 0.96

20 26 0.37 93 6.7 2.2 1 23 1105 1127 1105 1127 0.97

21 26 0.029 7.4 10.1 0.9 1 23 1135 1157 1135 1157 0.97

22 26 0.0018 0.46 13.9 0.4 1 23 1166 1188 1166 1188 0.97

23 26 0.2 52 7.5 1.8 1 23 1197 1219 1197 1219 0.96

24 26 2.5e-05 0.0062 19.8 0.8 1 23 1225 1247 1225 1247 0.99

25 26 0.016 4.1 10.9 2.9 1 23 1255 1277 1255 1277 0.96

26 26 0.012 3 11.4 0.1 2 23 1281 1302 1280 1302 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.012	3	11.3	2.2	1	23	270	292	270	292	0.96
2	26	0.0073	1.9	12.0	0.8	1	23	301	323	301	323	0.98
3	26	0.032	8.2	10.0	0.5	1	23	329	351	329	351	0.97
4	26	0.0073	1.9	12.0	1.7	1	23	359	381	359	381	0.95
5	26	0.045	11	9.5	0.8	2	23	391	412	390	412	0.96
6	26	0.0031	0.78	13.2	0.7	1	23	421	443	421	443	0.97
7	26	0.00062	0.16	15.4	0.6	1	23	449	471	449	471	0.96
8	26	0.51	1.3e+02	6.2	0.5	1	23	479	501	479	501	0.94
9	26	0.0039	0.98	12.9	0.8	1	23	509	531	509	531	0.97
10	26	0.002	0.51	13.8	1.2	1	23	540	562	540	562	0.97
11	26	0.086	22	8.6	1.6	1	23	571	593	571	593	0.96
12	26	3.8e-05	0.0098	19.2	0.6	1	23	599	621	599	621	0.99
13	26	0.0069	1.8	12.1	3.8	1	23	896	918	896	918	0.97
14	26	0.0042	1.1	12.8	1.2	1	23	927	949	927	949	0.98
15	26	0.17	44	7.7	0.7	1	23	955	977	955	977	0.94
16	26	0.0073	1.9	12.0	1.7	1	23	985	1007	985	1007	0.95
17	26	0.12	31	8.2	1.1	2	23	1017	1038	1016	1038	0.94
18	26	0.00039	0.099	16.0	2.3	1	23	1047	1069	1047	1069	0.97
19	26	0.0014	0.34	14.3	1.1	1	23	1075	1097	1075	1097	0.96
20	26	0.37	93	6.7	2.2	1	23	1105	1127	1105	1127	0.97
21	26	0.029	7.4	10.1	0.9	1	23	1135	1157	1135	1157	0.97
22	26	0.0018	0.46	13.9	0.4	1	23	1166	1188	1166	1188	0.97
23	26	0.2	52	7.5	1.8	1	23	1197	1219	1197	1219	0.96
24	26	2.5e-05	0.0062	19.8	0.8	1	23	1225	1247	1225	1247	0.99
25	26	0.016	4.1	10.9	2.9	1	23	1255	1277	1255	1277	0.96
26	26	0.012	3	11.4	0.1	2	23	1281	1302	1280	1302	0.97

Sequence Information

Coding Sequence: ATGCTAAGTAATCAAAGTTTGGTGTATACCCCCTTAGGAATAGAAAGTAAACAGAACAACACATTTTGTCCCGTTGAagaaCTTGACAAGGCTCACAGTAAACCaacaattaataaagaatatCCTGTAGAGAATGTTGATGTTAAAGAGGAAACATATGATGAGGAGTATTTTAATGAATCATATTCTATAAAATTGGAGGAAACcgattttaaaactgataatgaagaaaatatttctatggaAAAGGATCATTCTATGATCATGGCAGTGCATAAGATTGTTGATGGCATTGTCAACCACTTGGGTGAGGGAATTACCTCTGAAATTTCTGAGCTGCTACTTGGAGGGTTGATGGCAGTGTATGGAGCTCGGtgcaataatttgttttgttgccTGCATCCTCCTAAACGTACACTTTATGCAGATGATTCATCTATTGTTGTGACATGTCCTAAAGAACCGAGTCTTAAGGCTAATGTGAGCAATGCTACGCCAATTATTGATGGGTGGTTGGCATCAGACTTTTTGAAATGCAATCTAGGAAAATCCCAAACTTTAGTGTATttctctatttctagaaattccTTGAGTCaAGAACTTAACAAGGTGCACAGTAAACTATATATTGATAAAGAAGACCGTATAGGGGATATTGAAGTTAAAGAGGAAAAATATGATGAATATTTCAGTGAAACTTTTTCTATAAAACATGAGGAAGTTGACATTAAAATCGACAATGAAGAGTATACCTATAAGGAgattGCCAAACATGAACTGAGTGACCAATTGAAAAATGTTAAGGTGCATAAATGCCCGGAGTGTCCCTTCAAATCAGCTAAAAAGAATGACCTCAAAAGGCACTCAATCAGGCATAAAAATCCAAACGAAATTGTATGGTATCAATGTTCAGAGTGTCCATTCAAATCTGCTATTAAGAGTTACCTCAAACAACATTTGATTAAACATAAGCCCGATGAATGGTATGAATGTCCATATTGTCCTTACAAATCAGATCGAAAGAGTCGCATCAAAGGCCATTTGATTAGGCACACACCAGATGAAATTAAGTGGCATGAATGTCCGGAGTGCCCTTACAAATCTATTGATAAGAGTAATGTCAAAAGACATTCGTTCAGACATCAAAAATCAGATGAAATAGTATGGCTTAAATGTCCGGAGTGCCTTTACCAAACCACTGATAGAAGTGTTCTCAAAAGACATTCGTTAAAACATAAAAATCCAAATGAAATTGAATGGCATGAATGTCCAGAATGTCCTTTCAAATCTGCTAATAAGAGTCAAGTCAAACTGCATTTGAAGGTACATAAGCCAGATGAATGGTATCAATGTCCAGATTGTCCTTACAAAACATTTCGTAAGGGTGAGCTTAACAATCATTCGATCAGACATAAGTTAGAAGATATTGTATGGTATGAGTGTCCAGAGTGTCCCTACAAGACAGCTTGGAAGAATCGCCTCAAAAAGCACTCGATCAGACATAAGCCAGATGAAATTGCATGGTATAAATGTTTAGATTGTCCATACAAATCAGCTGATAAGAGTAACATCAAGAGGCATTCGATCAGACATAAAAAACCAGACGAAATTGTATGGTATAAATGTCCGGATTGTGTTTACCAATCCAATGATAAGAGTACCCTCAAAAAGCACTCGATCAGGCATaaaaatgtaaacgaaattgAATGGTATGATTGTTCAGAGTGTTCTTACAGATCTGCTAATAAGAGACAGTTTAAATGGCACTCAATCAAACATAAGCCAGATGAATGGTATGAATGTCCCGAGTGTCCTCACAAATCTGCTCAGAAGGGTGACCTTAAAAAGCATTTAATGACACATAAGCCAGTGGAACTAATTGTTAAGAAGAGAAGCATGTTAAGTAGTCAAAGTTTGATGGATACTCCTTTAGAAATAGAAAGTAAACAGAACAACACATTTTGTCCTGTTGAagaaCTTGACAAGGCTCACAGTAAACCatctattaaaaaagaaaatcctGTAGAGAATGTTGATATTAAAGAGGAAACATATGATAAAGAGTATTTCAATGAACCATATTCTATAAAACTGGAGGAAAGTGATAATGAAGAAAATACTTCTATgcaAAGAGATCATTCTATGATCATGGTGGTGCATAAGATTGTTGATGGCATCGTCAACCACTTCGGTGAGGGAACTACCTTTGAAATATCTGAGCTGCTACTTGGAGGGTCGATGGCCGTGAATGGAGCTTGgtgcaataatttattttgttgccTGCATCCTTTTAAATGTACACTTTATGCAGATGACTCATCTATTCTGACATGTCCTAAAGATTCAAGTCTTGAGGCTAATGTGAGCAATACTACGACAATAACTGATGGGTTGTTGGCATCAGACTTTTTGAAATGCAATCCAGAAAAATCTCAAACTTCAGTGttctctatttctagaaattccTTGAGTCaAGAACTTGACAAGGTGCACAGTAAACTACATATTGGTAAAGAAGACCGTATAGGGGATATTGATATTAAGGAAGAAAAATATGATGAATATTTCAGTGAAACTTATTCTATAAAACATGAGGAAGTTGACATTAAAATCGACCATGAAGAGGATACCTATAAGGAgatCGCCAAACATGAACTGAGTGACCAATTGAAAAATGTTAAGGTGCATAAATGCCCGAAGTGTCCCTTCAAATCAGCTAAAAGGAGTGACCTCAAAAGGCACTCGAACAAGCATAAAAATCCAAATGAAATTGTATGGTATCAATGTTCAGAATGTCCATTCAAATCAGCTAATAAGGGTTACTTCAAACAACATTTGATCAAACATAAGCCAGACGAATGGTTTCAATGTCCATATTGTCCTTACAAATCAGATCGGAAGGGTCGCATCAAAGAGCATTCAATCAGGCACACGCCAGATGAAATTAAGTGGCATGAATGTCCGGAGTGCCCTTACAAATCAATTGATAAGAGTAATGTCAAAAGACATTCATTCAGACATCAaaaatcagatgaaatattatggcTTAAATGTCCAGAGTGCCTTTACCAGACCACTGATAGAAGTGTTCTCAAAAGGCATTCGTTCAGACATAAAAATCCAAATGAAATTGAATGGCATGAATGTCCAGAATGTCCTTTCAAATCTGCTAATAAGAGTCACCTCAAACTGCATTTGAAGGTACATAAGCCAGATGAATGGTATGAATGTCCAGATTGTCCTTACAAAACATTTCGGAAGAGTGAATTTAACAATCATTCGATCAGACATAATTCAGATGATATTGTATGGTATGAGTGTTCAGAGTGTCCCTACAAGACAGCTTGGAAGAGTTGCCTCAAAAAGCACTCGATCAGACATAAGCCAGATGAAATTGCATGGTATAAATGTTTAGAGTGTCCATACAAATCACCTGATAAGAGGAACATCAAGAGACATTCGATCAGACATAAAAAACCAGATGAAATTGTGTGGTATAAATGTCCGGATTGTGTTTACCAATCAGTTGATAAGAGTGCCCTCAAAAAGCACTCGATCAGACATaaaaatgtaaacgaaattgAATGGTATGATTGTTCAGAGTGTTCTTACAGATCTGCTAATAAGAGACAGTTCAAACTGCACTCGATCAAACATAAGCCAGATGAATGGTATGAATGTCCCGAGTGTCCTCACAAATCTGCTCAGAAGAGTGACCTAAAAAAGCATTTAATCACACATAAGCCAGGTGAAATTGTCTGGCATGAATGTTCAGATTGTCCTTACAAAACAACTATTAAGAGTAATTTCAATAGACATTcaatcaaacataaaaatattaaatgtccAGAGTGTCTTTATGAGTCAGTCAATTTAAGTGAcctaaaaaatcatttgattAGTCATAAAAATCCAAAAGAAATTGACGGATGA
Protein Sequence: MLSNQSLVYTPLGIESKQNNTFCPVEELDKAHSKPTINKEYPVENVDVKEETYDEEYFNESYSIKLEETDFKTDNEENISMEKDHSMIMAVHKIVDGIVNHLGEGITSEISELLLGGLMAVYGARCNNLFCCLHPPKRTLYADDSSIVVTCPKEPSLKANVSNATPIIDGWLASDFLKCNLGKSQTLVYFSISRNSLSQELNKVHSKLYIDKEDRIGDIEVKEEKYDEYFSETFSIKHEEVDIKIDNEEYTYKEIAKHELSDQLKNVKVHKCPECPFKSAKKNDLKRHSIRHKNPNEIVWYQCSECPFKSAIKSYLKQHLIKHKPDEWYECPYCPYKSDRKSRIKGHLIRHTPDEIKWHECPECPYKSIDKSNVKRHSFRHQKSDEIVWLKCPECLYQTTDRSVLKRHSLKHKNPNEIEWHECPECPFKSANKSQVKLHLKVHKPDEWYQCPDCPYKTFRKGELNNHSIRHKLEDIVWYECPECPYKTAWKNRLKKHSIRHKPDEIAWYKCLDCPYKSADKSNIKRHSIRHKKPDEIVWYKCPDCVYQSNDKSTLKKHSIRHKNVNEIEWYDCSECSYRSANKRQFKWHSIKHKPDEWYECPECPHKSAQKGDLKKHLMTHKPVELIVKKRSMLSSQSLMDTPLEIESKQNNTFCPVEELDKAHSKPSIKKENPVENVDIKEETYDKEYFNEPYSIKLEESDNEENTSMQRDHSMIMVVHKIVDGIVNHFGEGTTFEISELLLGGSMAVNGAWCNNLFCCLHPFKCTLYADDSSILTCPKDSSLEANVSNTTTITDGLLASDFLKCNPEKSQTSVFSISRNSLSQELDKVHSKLHIGKEDRIGDIDIKEEKYDEYFSETYSIKHEEVDIKIDHEEDTYKEIAKHELSDQLKNVKVHKCPKCPFKSAKRSDLKRHSNKHKNPNEIVWYQCSECPFKSANKGYFKQHLIKHKPDEWFQCPYCPYKSDRKGRIKEHSIRHTPDEIKWHECPECPYKSIDKSNVKRHSFRHQKSDEILWLKCPECLYQTTDRSVLKRHSFRHKNPNEIEWHECPECPFKSANKSHLKLHLKVHKPDEWYECPDCPYKTFRKSEFNNHSIRHNSDDIVWYECSECPYKTAWKSCLKKHSIRHKPDEIAWYKCLECPYKSPDKRNIKRHSIRHKKPDEIVWYKCPDCVYQSVDKSALKKHSIRHKNVNEIEWYDCSECSYRSANKRQFKLHSIKHKPDEWYECPECPHKSAQKSDLKKHLITHKPGEIVWHECSDCPYKTTIKSNFNRHSIKHKNIKCPECLYESVNLSDLKNHLISHKNPKEIDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -