Kmac098655.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- Zbtb41
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010004349.1:665342-668587[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.096 24 8.5 0.9 3 23 23 44 21 44 0.96 2 25 2.4 6.1e+02 4.1 0.3 2 18 81 97 80 97 0.90 3 25 0.015 3.7 11.1 1.8 1 23 138 161 138 161 0.92 4 25 0.016 4 11.0 1.3 1 23 199 222 199 222 0.95 5 25 0.00047 0.12 15.8 0.0 3 23 231 252 230 252 0.92 6 25 0.0015 0.38 14.2 1.7 1 23 258 281 258 281 0.93 7 25 1.7 4.4e+02 4.5 4.2 1 17 289 305 289 318 0.77 8 25 0.0082 2.1 11.9 3.8 2 23 340 362 339 362 0.91 9 25 0.022 5.6 10.5 5.0 1 23 504 527 504 527 0.94 10 25 1.7e-05 0.0043 20.3 0.6 2 23 535 557 535 557 0.96 11 25 0.0009 0.23 14.9 0.2 1 23 563 585 563 585 0.98 12 25 0.00048 0.12 15.7 0.3 2 23 614 636 613 636 0.95 13 25 4.7e-05 0.012 18.9 2.1 2 23 644 666 644 666 0.96 14 25 9.9e-05 0.025 17.9 1.4 1 23 672 695 672 695 0.94 15 25 0.0011 0.27 14.7 6.7 1 23 701 723 701 723 0.99 16 25 0.25 64 7.2 4.0 2 23 730 751 730 752 0.94 17 25 0.0054 1.4 12.4 0.6 1 20 758 777 758 781 0.94 18 25 0.00052 0.13 15.6 2.7 1 23 791 814 791 814 0.97 19 25 0.056 14 9.2 1.7 2 23 821 843 820 843 0.96 20 25 0.00012 0.031 17.6 0.0 2 23 849 870 848 870 0.96 21 25 0.057 15 9.2 1.3 2 23 881 900 880 900 0.89 22 25 8.7e-06 0.0022 21.2 2.0 1 23 907 929 907 929 0.98 23 25 0.021 5.3 10.6 6.7 1 23 935 957 935 957 0.98 24 25 0.0011 0.27 14.6 2.4 1 23 963 985 963 985 0.96 25 25 0.12 31 8.2 4.7 1 20 991 1010 991 1012 0.95
Sequence Information
- Coding Sequence
- ATGATTCTTATGCTGGAAGAAGATAAAAACATACTGGGCTCCAAGGCACAACTTAGCCTCTTCTGGTGtaatttttgtagtattttttgtACAAGTGCTGAAACTTTAATGAACCACATATCTGTAGAACATCGTGAACCACAGAGCAcccttaatattttcaaaaaagctGAGAATGGTATTCATTGCGAAAATGGCAGTATTTTAGCTGATGGTGTAGTTCTTCGCGACGGATCAGTAAAATGCACACCTTGCGATATGACCTTTAAATATAAAAGGTCTttgataaaagatttaaatggGAAGCATAGCCGATTTAAAATGACATACTGCTATAAATGTATATCGTCCTTTAAGACCTTTGAAGATTTGGAGGGGCATTTTAAATTGGATCATATTGGcgaaaatttttttctttgcgGTGTATGCGGAAATTCATTCcgaattaaaaaacaacttagaAACCACTTCAAGCAATTCCACaaaacttttgtagaaaaatggcaattatgttgttatttttcccATGAAAATCATTTAGATCGTTTAAAAAGGGAGAATCTTGATATTGAAAGTGATAATGGAATTGAATTATTTGAATGCTTGCGCTGCAAAAATATATTTCGGAGTTGGCAAAATGCGAAAAAACACATGCTTCTCAAACATGCTTTAAAACCTAAACTGAAAGCTTGTCCTGATTGTGGCAGGCAGTTTAAGACGGCATATGATGTAGCAAGACATGTTGCTCAACTACATTCAGATGTTAGGCCGTTCATATGTGGCGACTGTAAAAGATCTTTTAAACTTAAACAACAGCTTAGAGTTCATTTTAAGGGACGACATAAACTTATTCTAGAAGAGCTTTTTAAATGCGAAGAATGCAAAAGAGACTTTGACGATAAGACATATTTCACTAGCGAGGGAAAGTTAAACTCACATATGGTTAAGATCCATCTCGAATCAGATATAGACGTAAATAATGCAGTTGAAGCAACTATTCATAACAATGAATTAGTCAAGTGTCCAAGATGtacaaaaagctttaaaaatataaattgcttAAAGAAGCACGTTAGTTTTATGCATTCTAATGATCGTGCTGAGATTGACGAAATTCCTCTTATGAcaataaaaattgaaacttcTGATGATAAAAATAGCACTTATATTgaagaaatttgtttaataagTGACCAAATTACTCCACAGGAAATTATCGACTTACCTGTCAATGTAAATGACCACACATATAGCAAATTTGGATCTGAAAGTAGTACCGATGAGGAAAAAAGTCTGGCGGAAGTTACCTCTGGAGGTAAAAAGGAGCAGATTCTCAGAAACGGGACTAATGAAAAAAGAATGCCGGTAGCTTctgataataatattgaaaataatgaggAACAGCCTCTCATAAGTGAGTCTAATGAAAATAGCTCGAATTTAGGTTTTACTGATAATACTCAAAAAGAGGACGTTGATTATGTaaatgaagaaaaaagaatgctgTCATTTAAATGTAGTTATTGtggaaaaataatgaaaaacgcTGTATGTCTAAAAAAGCATATACATTTTTCCCattctactaatattaaaatgcgCAAATGTGATAATTGCGGACGTTATTTTAAAAGATCTTCAGATTTAAAGTATCACATCGCTATGGTACACTCTGACGAACGACCTTTTATGTGCGCTATATGTGGAAACGGATACaagttaaaaaatcagcttatTCAGCACATGAAAATACATCGCGAAAATCTTACATCGTCTGAAGATGCTAAAAATGATGTGCCTAACGATTCAATAATTGAAGTTGTAAATACTGAACGTTTAGTATGCGATACTTGTGGCAAATTATTTAAGAACCAACAGACACTGCTTGGTCACATACGGCTATATCATTCATTGAATCTTAAAATACGCGAATGCCCGTCATGCAAAAAACAGTTTAAACGGTCGCATGCTTTGAAAAAACACATTGCAACTGTCCATCAGACGGAATGTCCGTTTTTGTGTAATCATTGTGGAAAGTCTTTCAAAATCGAACCTAATCTTAAAATGCATATTAGTAGAGAACATACGGAGCACTCTCGTTTTAAATGTGCACATTGTGACAAAGACTTTAAACATTACCAGTCATTAAAACTGCATGAAAGGAGACACACCAATGCGTACGTTGAAGAGTGTACCACTTGTAATAAAAGGTTTTTCCAGATGCGATTTTACCTCAACCACATGGCGCAACATCACTCTGAGGAATGCCCTTTTAAGTGCCCGTTTTGTGATAAAAAGTTTAAGATTAAACGAGGACTAGGGAATCACATCTGGCAAGTACATAAGAGAAAATCTCTTCCGAAACGTCAGTTCGACTGTAAATTTTGTGATCAAAAGTTTAACCTAAAATCTTCTTTGCTTATTCATCAGAGAAGAAAACATACGTTGGAGTACGTTAAAAAATGTGATTTATGCGACAAAAAGTTTTTTGTGATGCGCGATTATACCAGTCACTTACTGTCGAGGCATAGTGAACCAACTATACCTTGCGATGTTTGCGGCAAAATGTACCCAACCGCCACTAGTTTAGTACAGCACAAACGAATTCACCAAGACGACTATCACGAAAAATATTGGAAAGAATGTCCCGTTTGCAATAAAAAATTCAGAAGTCTAAAAATTCACATGCGTGATTTTCATGAGAGCGACGGGAAAAACTTTGTATGCCATCTGTGTGGTAAAAGTTTTCGGGAAAAAAATACCTTAAGATTGCACCTTATGATACATAACGATATTAAGCCACACCAATGTTCATTCTGTGGGAAACGGTTTCTCACAAATCAGCATTTACTGACCCATACACGGCAACATACTGGTGAAGCTGCACATGCTTGTTCTTATTGCGATAAGAGATTTACAACCAAACGGGGAAAGGAGGTGCATGAGAGAATACATTTAGGAGTAAAGCCCTTTCAGTGCGAAACGTGTCCGATGGCTTTTCATGACAAAAGACAATTTTGTAAACACAAATATTCAAGGCCAGGCTTAGACTATAGCTGCTATGTAGAATAG
- Protein Sequence
- MILMLEEDKNILGSKAQLSLFWCNFCSIFCTSAETLMNHISVEHREPQSTLNIFKKAENGIHCENGSILADGVVLRDGSVKCTPCDMTFKYKRSLIKDLNGKHSRFKMTYCYKCISSFKTFEDLEGHFKLDHIGENFFLCGVCGNSFRIKKQLRNHFKQFHKTFVEKWQLCCYFSHENHLDRLKRENLDIESDNGIELFECLRCKNIFRSWQNAKKHMLLKHALKPKLKACPDCGRQFKTAYDVARHVAQLHSDVRPFICGDCKRSFKLKQQLRVHFKGRHKLILEELFKCEECKRDFDDKTYFTSEGKLNSHMVKIHLESDIDVNNAVEATIHNNELVKCPRCTKSFKNINCLKKHVSFMHSNDRAEIDEIPLMTIKIETSDDKNSTYIEEICLISDQITPQEIIDLPVNVNDHTYSKFGSESSTDEEKSLAEVTSGGKKEQILRNGTNEKRMPVASDNNIENNEEQPLISESNENSSNLGFTDNTQKEDVDYVNEEKRMLSFKCSYCGKIMKNAVCLKKHIHFSHSTNIKMRKCDNCGRYFKRSSDLKYHIAMVHSDERPFMCAICGNGYKLKNQLIQHMKIHRENLTSSEDAKNDVPNDSIIEVVNTERLVCDTCGKLFKNQQTLLGHIRLYHSLNLKIRECPSCKKQFKRSHALKKHIATVHQTECPFLCNHCGKSFKIEPNLKMHISREHTEHSRFKCAHCDKDFKHYQSLKLHERRHTNAYVEECTTCNKRFFQMRFYLNHMAQHHSEECPFKCPFCDKKFKIKRGLGNHIWQVHKRKSLPKRQFDCKFCDQKFNLKSSLLIHQRRKHTLEYVKKCDLCDKKFFVMRDYTSHLLSRHSEPTIPCDVCGKMYPTATSLVQHKRIHQDDYHEKYWKECPVCNKKFRSLKIHMRDFHESDGKNFVCHLCGKSFREKNTLRLHLMIHNDIKPHQCSFCGKRFLTNQHLLTHTRQHTGEAAHACSYCDKRFTTKRGKEVHERIHLGVKPFQCETCPMAFHDKRQFCKHKYSRPGLDYSCYVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -