Basic Information

Insect: Kuschelorhynchus macadamiae
Gene Symbol: -
Assembly: GCA_030620095.1
Location: JAUTXW010000620.1:115464-142883[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.0059 1.5 12.3 3.8 1 23 123 145 123 145 0.96

2 31 0.013 3.3 11.2 4.3 1 23 153 175 153 175 0.96

3 31 0.01 2.6 11.5 0.7 1 23 183 205 183 205 0.98

4 31 0.015 3.8 11.0 1.9 1 23 214 236 214 236 0.97

5 31 0.052 13 9.3 0.1 1 23 244 266 244 266 0.92

6 31 0.094 24 8.5 2.1 1 23 275 297 275 297 0.97

7 31 5.3 1.3e+03 3.0 0.1 9 23 314 328 303 328 0.72

8 31 0.045 11 9.5 1.2 1 23 336 358 336 358 0.96

9 31 0.00067 0.17 15.3 0.6 1 23 366 388 366 388 0.98

10 31 0.0036 0.92 13.0 0.9 1 23 610 632 610 632 0.96

11 31 0.013 3.2 11.3 1.4 1 23 640 662 640 662 0.97

12 31 0.015 3.7 11.1 0.3 1 23 671 693 671 693 0.98

13 31 0.0018 0.45 14.0 0.4 1 23 702 724 702 724 0.97

14 31 0.002 0.5 13.8 0.2 1 23 733 755 733 755 0.97

15 31 0.0075 1.9 12.0 1.3 1 23 764 786 764 786 0.96

16 31 0.00082 0.21 15.0 0.9 1 23 795 817 795 817 0.97

17 31 0.0037 0.94 12.9 1.7 1 23 826 848 826 848 0.97

18 31 0.00024 0.06 16.7 2.7 1 23 857 879 857 879 0.95

19 31 0.0012 0.31 14.5 0.3 1 23 934 956 934 956 0.97

20 31 0.0005 0.13 15.7 0.4 1 23 964 986 964 986 0.98

21 31 0.063 16 9.1 0.4 1 23 995 1017 995 1017 0.96

22 31 0.058 15 9.2 1.1 1 23 1026 1048 1026 1048 0.97

23 31 0.002 0.52 13.7 2.0 1 23 1057 1079 1057 1079 0.97

24 31 0.047 12 9.5 4.5 1 23 1088 1110 1088 1110 0.97

25 31 7e-05 0.018 18.4 0.8 1 23 1119 1141 1119 1141 0.97

26 31 0.068 17 9.0 1.1 1 23 1150 1172 1150 1172 0.96

27 31 0.0025 0.64 13.5 0.2 1 23 1181 1203 1181 1203 0.95

28 31 0.0011 0.28 14.6 0.9 1 23 1212 1234 1212 1234 0.97

29 31 0.036 9 9.8 1.1 1 23 1243 1265 1243 1265 0.97

30 31 5.2e-05 0.013 18.8 1.2 1 23 1274 1296 1274 1296 0.95

31 31 0.12 29 8.2 2.5 1 23 1305 1327 1305 1327 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.0059	1.5	12.3	3.8	1	23	123	145	123	145	0.96
2	31	0.013	3.3	11.2	4.3	1	23	153	175	153	175	0.96
3	31	0.01	2.6	11.5	0.7	1	23	183	205	183	205	0.98
4	31	0.015	3.8	11.0	1.9	1	23	214	236	214	236	0.97
5	31	0.052	13	9.3	0.1	1	23	244	266	244	266	0.92
6	31	0.094	24	8.5	2.1	1	23	275	297	275	297	0.97
7	31	5.3	1.3e+03	3.0	0.1	9	23	314	328	303	328	0.72
8	31	0.045	11	9.5	1.2	1	23	336	358	336	358	0.96
9	31	0.00067	0.17	15.3	0.6	1	23	366	388	366	388	0.98
10	31	0.0036	0.92	13.0	0.9	1	23	610	632	610	632	0.96
11	31	0.013	3.2	11.3	1.4	1	23	640	662	640	662	0.97
12	31	0.015	3.7	11.1	0.3	1	23	671	693	671	693	0.98
13	31	0.0018	0.45	14.0	0.4	1	23	702	724	702	724	0.97
14	31	0.002	0.5	13.8	0.2	1	23	733	755	733	755	0.97
15	31	0.0075	1.9	12.0	1.3	1	23	764	786	764	786	0.96
16	31	0.00082	0.21	15.0	0.9	1	23	795	817	795	817	0.97
17	31	0.0037	0.94	12.9	1.7	1	23	826	848	826	848	0.97
18	31	0.00024	0.06	16.7	2.7	1	23	857	879	857	879	0.95
19	31	0.0012	0.31	14.5	0.3	1	23	934	956	934	956	0.97
20	31	0.0005	0.13	15.7	0.4	1	23	964	986	964	986	0.98
21	31	0.063	16	9.1	0.4	1	23	995	1017	995	1017	0.96
22	31	0.058	15	9.2	1.1	1	23	1026	1048	1026	1048	0.97
23	31	0.002	0.52	13.7	2.0	1	23	1057	1079	1057	1079	0.97
24	31	0.047	12	9.5	4.5	1	23	1088	1110	1088	1110	0.97
25	31	7e-05	0.018	18.4	0.8	1	23	1119	1141	1119	1141	0.97
26	31	0.068	17	9.0	1.1	1	23	1150	1172	1150	1172	0.96
27	31	0.0025	0.64	13.5	0.2	1	23	1181	1203	1181	1203	0.95
28	31	0.0011	0.28	14.6	0.9	1	23	1212	1234	1212	1234	0.97
29	31	0.036	9	9.8	1.1	1	23	1243	1265	1243	1265	0.97
30	31	5.2e-05	0.013	18.8	1.2	1	23	1274	1296	1274	1296	0.95
31	31	0.12	29	8.2	2.5	1	23	1305	1327	1305	1327	0.94

Sequence Information

Coding Sequence: ATGACATATTTATCTGTGAAGCACGAAGATGTAGCAGTTAAAAATGAATTGGATGAATGTGATAATAgAGAGAGAGAATCTGTAGGTTTTTCTCTAAATAGTTCTGTATCTTTGAAACAGGAAGGAATAATGGTTAAATGTGAATTAGAGGACTGTGATAATAGAAAGCTTAACAAGGCATACAGAAAATCAGGTATTGATAATGAAGATGATATTGATGTTAAAGAGGAAGAAGGTTATGAGGACTATTTCAATGAGTCATATTCTATAAAACATGAGGAAGTAAACATCAAAAGTGATCATGAAAAGGAAACATCTGAGGAggtcACCAAACATAAACTTacacataaaatgaaaaatgagcTGCATAAATGTCCGGAGTGTCCCTACCAGTCAGCTAGAAAGAGTTACCTTAAACATCATTCGATTAGacataaaccagaaaaaattgtATGGTATCAATGTTCGCAGTGCCCTTACAAGTCAGCTCATAGGAGTAACCTCAAACAGCATTCCTTCAAACATAAGCCTGATGAACTTGAATGGTATAAATGTTCAGAATGTCCTTACAGATCACCTTACAAGAGTGTCTTGAATTATCATTTGATCAGACATAAAAAGCCAAATGAAATTGTTTGGTATGAATGTCCAGACTGTCCTTTCAAATCAGCCCACAAGAATAAACTTAAGCAGCATTCTATCAAACATAAGCCACatgaaattgtatggtatgaATGTCCAGAATGTCCTTACATGTCAGCTCGCAAGAGGGACCTCAAACCGCATTCGATCATACATAAAAAGCCCAatgaaattgtatggtatgaATGCTCAGAGTGTCCATTCATATCAGCTCGCAAGAAATGCCTCAAAAGTCACTCGATCAGGCATAAAAAGTCAAATGAAATTGAATGTTATGAATGTCCAGAGGGTGCTTTCAAATCAGCTGGCAAGAGTAACCTCAAACAGCATACCATCAGACATACACCAGATGTCATTGTTTGGTATGATTGTCAAAAGTGTCCTTACCGATCAGAGAGtaaaaatgactttaaaaatCATTTGGTTAGTCATAATCCAAACGAAATTGTATCATATAAATGCCCCGAATGTCCTTACCAATCAGATAAAAAGCGTAACCTCAGAGAGCATTTAATCAGACATAAAAAGCCAGATAAAAATGTACGACTTGACAAGGTGCACAATAGTAGAATATATATTGGTAAAGAAGACCATATAGATAATATTGATGTTAAAAAGGAGGAAGATGACGAGGACTATTTTAACGAATCAATTTCAATTAAACAGGAGAGAGTAAACATTAAAAGTGATAATGAAGAAGATACACCTAAGAAAAAACTTGACAAGGCTCACAGTACATCAGACATTGTGAAAGAAGAGGATATTGATGTTAAAGAGGAAGAAGATGATGAGGACTATTTTAACGAACCAATTTCAATAAAACAGGATAAAGTAAACATTAAAAGCGATAATGAAGAGGATACACCTAAGAAACTGTTATATTCTAGAAAACTTGACAAGGCTCACAGTACATCAGACATTGTGAAAGAAGAGGATATTGATGTTAAAGAGGAAGAAGATGATGAGGACTATTTCAAGGAATCATATTCTATAAAGCCTGAGGAAGTAAACATAAAAAGTGATAATGAAGAGGACACCACTAACGAGGCCCCCAAACATAAACTTacatataaattaaaagaaaaagctaTGCTGCAAAATTGTCCAGAGGACCCTTACCGATCAGCTAGCGAGAGTAATCTCAAACAGCTCTCCGTTAGACATACGCCAGATGCCATTGTTTGGCATGACTGTCCAGAGTGCCCTTACCAATCGGATAGTAACAGTGACTTTAAAAAGCACTTGATCAGTCATAATCCAAATAAATATGTATCATATAAATGCCCAGACTGTCCTTACCAATCAGATAATAAGAATACTTTCAAACAACATTCGATCAGACATAAAGATccagatgaaattgtatggtatgaATGTCCAGATTGTCCTTTCAAATCAGCTTCCAAGAGTATCCTTAAACGGCATTCGATAACACATAAAAAGCAAAACGAAATTGTATGGTACAAATGTCCAGATTGTCCTTACCAATCACCCAGTAAGGGTACCCTAAAACAACATTCGATCAAACATAAAAAGCCCAATGAAATCGTTTGGTATAAATGTCCAGAGTGTCCTTACCAAACAGCTGGTAAGGGTAACCTCAAACAGCATTCGATCAAACATAAAAAGCCAGATGAAATCGTTTGGTATGACTGTCCAGAGTGTCCTTTCAAATCAGCTCACAAGAGTCTCCTCAAACAGCATTCGATCAAACATAAGAAGCCAAACGAAGTTGAATGGTACAAATGTCCAGAGTGTCCTTACCAATCCAATTATAAGAGTGCCCTCAGGAAGCATTCAATTAAGCacaaacataaaaatgaaattgtatggtatgaATGTCCAGAGTGTGCTTACAAATCGGCTCATAAGAGTAGCCTCAAAAAACATTCGATTAAACATCAGAAGCCAAATGAAATTGTATGGTATAAGTGTCCGGACTGTCCTTACAAATCAAATCAGAAGAGTAACCTCAAACATCATTCCATCCAACATAAAAAGCCAAATGAAATTGTATGGGCCGGCAAACataaacttaaatataaattaaaagagaAAGATAAGACGCAAACATTTCCAGAGGGCCCTTACCAATCAGATAGTGAGAGTAATCTCAAACAGAATTTCATCAGACATACACCAGATGCCATTGTTTGGTATGACTGCCCAGAGTGCCCTTACCAATCAGACAGTAACAGTGACTTTAAAAAGCATTTAATCAGTCATAATCCAAATGAATATGTATCATATAAATGCCCAGACTGTCCTTACGAATCAGATAATAAGGGTAGTTTCAAACAGCATTTGATCAGACATAAAAATccagatgaaattgtatggtatgaATGCCCAGATTGTCCTTTCAAATCAGCTTACAAGAGTATCCTTAAACGACATTCGATCAaacataaaaatctaaatgaaatttTATGGTACAAATGTCCAGATTGTCCTTTCAAATCAGTGCACATGATGAGCCTCGCAAAACATTCGATCAAACATAAAAATCCAAATGAAATCGTATGGTATAAATGTTCAGAATGTCCTTACCAAACCGCTAATAAGGGTCACCTCAAACAGCATTCGATCAGACATAAAAAGCCAGATGAAATTGTTTGGTACGAATGTCAACACTGTCCATTCAAATCAGCTCACAAGAGTCTCCTCAAACAGCATTCGATCAAACATAAGAAGCCAAACGAAGTTGAATGGTACAAATGTCCAGAGTGTCCTTACAAATCAACTGATAAGAGTGCCCTCAAAAAGCATTCGATCAagcacaaaaatataaatgaaattgtATGGCATGAGTGTCCAGAGTGTGCTTACAAATCGGCTTATAAGAGTAGCCTTAAACTACATtcgattaaacataaaaaactaaatgaaatTGTATGGTATAAGTGTCCAGACTGTCCTTACAAATCAGCTCAGGAGGGTAACCTCAAACTGCATTCGATCCAACATAAAAAGCCAAACGAAGTTGAATGGTACAGATGTCCAGAGTGTCCTTACCAATCCAATTATAAGAGTGCCCTCAAAAAGCATTCGATCAagcacaaaaatataaatgaaattgtGTGGTATGAATGTCCAGAATGTGCTTACAAATCGGCTCATAAGAATAGCCTCAACCAACATtcgattaaacataaaaaaccaaATGAAATTGGATGGTATAAGTGTCCGGACTGTCCTTACAAATCAACTCAGAAGAGTAACCTCAAACAGCATTCGATCCAACATAAAAAGCCAAATGAAATTGTGTGGCATGAATGTCCAGAGTGTTCTTTCAAATCATCTTACAAATATGCTCTAAAACAGCATTCAGTCAAACATAAGAAGTCAAATAAAACTGTATtatga
Protein Sequence: MTYLSVKHEDVAVKNELDECDNRERESVGFSLNSSVSLKQEGIMVKCELEDCDNRKLNKAYRKSGIDNEDDIDVKEEEGYEDYFNESYSIKHEEVNIKSDHEKETSEEVTKHKLTHKMKNELHKCPECPYQSARKSYLKHHSIRHKPEKIVWYQCSQCPYKSAHRSNLKQHSFKHKPDELEWYKCSECPYRSPYKSVLNYHLIRHKKPNEIVWYECPDCPFKSAHKNKLKQHSIKHKPHEIVWYECPECPYMSARKRDLKPHSIIHKKPNEIVWYECSECPFISARKKCLKSHSIRHKKSNEIECYECPEGAFKSAGKSNLKQHTIRHTPDVIVWYDCQKCPYRSESKNDFKNHLVSHNPNEIVSYKCPECPYQSDKKRNLREHLIRHKKPDKNVRLDKVHNSRIYIGKEDHIDNIDVKKEEDDEDYFNESISIKQERVNIKSDNEEDTPKKKLDKAHSTSDIVKEEDIDVKEEEDDEDYFNEPISIKQDKVNIKSDNEEDTPKKLLYSRKLDKAHSTSDIVKEEDIDVKEEEDDEDYFKESYSIKPEEVNIKSDNEEDTTNEAPKHKLTYKLKEKAMLQNCPEDPYRSASESNLKQLSVRHTPDAIVWHDCPECPYQSDSNSDFKKHLISHNPNKYVSYKCPDCPYQSDNKNTFKQHSIRHKDPDEIVWYECPDCPFKSASKSILKRHSITHKKQNEIVWYKCPDCPYQSPSKGTLKQHSIKHKKPNEIVWYKCPECPYQTAGKGNLKQHSIKHKKPDEIVWYDCPECPFKSAHKSLLKQHSIKHKKPNEVEWYKCPECPYQSNYKSALRKHSIKHKHKNEIVWYECPECAYKSAHKSSLKKHSIKHQKPNEIVWYKCPDCPYKSNQKSNLKHHSIQHKKPNEIVWAGKHKLKYKLKEKDKTQTFPEGPYQSDSESNLKQNFIRHTPDAIVWYDCPECPYQSDSNSDFKKHLISHNPNEYVSYKCPDCPYESDNKGSFKQHLIRHKNPDEIVWYECPDCPFKSAYKSILKRHSIKHKNLNEILWYKCPDCPFKSVHMMSLAKHSIKHKNPNEIVWYKCSECPYQTANKGHLKQHSIRHKKPDEIVWYECQHCPFKSAHKSLLKQHSIKHKKPNEVEWYKCPECPYKSTDKSALKKHSIKHKNINEIVWHECPECAYKSAYKSSLKLHSIKHKKLNEIVWYKCPDCPYKSAQEGNLKLHSIQHKKPNEVEWYRCPECPYQSNYKSALKKHSIKHKNINEIVWYECPECAYKSAHKNSLNQHSIKHKKPNEIGWYKCPDCPYKSTQKSNLKQHSIQHKKPNEIVWHECPECSFKSSYKYALKQHSVKHKKSNKTVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -