Kmac067807.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- clz9
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010002753.1:1903779-1905686[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-06 0.00016 24.2 0.0 3 41 18 56 16 60 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGCACCTATGTTAGAAAAACGCAAAGAGGATGTGGATATTCAAAAGAAGACCTCAAAATAGCTGTGAGTTCTGTCAAAAATGGTCTAATGACAACCTATAGAGCCAGCTTGGTAtacaatataccaaaaaatactaTCCGCGACCATGTTAGCGGAAGAAGGGGTAAAAAAAGCATGACTTATGGCAGAAGAACGGACCTTACTCCAGAAGCTGAGAAGTCCTTGGTTAACTGCATCCGGTGTTTACAAAAATGGGGTTTTGGTCTAACCAGAAAAGAGGTTTTGGAAATTGTTGCACAATATGTCAAAATTAACAACATTAATACTCAGTTTAAACATGGAATTCCGGGCGAAGACTGGTTCCTAAATTTTAAACGACGCCATAATCTTTCTATAAAGATGCCACAAAATGTTGAATTTGCAAGAAAAAAGAATATTGATCCGTTTTTAATCTATCAGTACTTTGATTTACTCGAAAAAACTCTGAAAGACCTTAATTTGGAGAACAGGCCATCCCaaatatggaatatggacgaAAGTAGTTTTTGCTCAGAcccttctaaaacaaaaattgttggcCAAAGGGGATTACCAGCTACTCGCACGACAAGTGGGCCTGGTAAGCAGAACACTACCGTTCTAATGTGCGGTAGTGCAAGCGGGGAAAAAGCACCgccattaattattttcaaaggcAAGCACGTTTGGGATCAATGGGCAGCACCCCCAGGTAGTGAATATCCAAATACAACCTATGCAGCAACAGCTAATGGGTGGATGGAAAGCacagtgtttaaaaattattttgaaaaaagttttattaaacatttgtctCCAGATCGTCCAGTTCTAGTAGTGTACGATGGACATGCTACGCATTTAAGCGTGGAGGTTATTAAAATTgcaattgaaaaccaaataacaattttgaaactTCCGCCACATACTAGTCACATATTGCAGCCACTGGACTTAAGTGTCTTTAAGTCGCTTAAAAGTCGCTGGGATGTCAAGTTAGTCGAATGGCAACGCAAAAATGTAGGTGTAAAGATTCCTAAAAGTATATTTTCGAAGCTTATTGGTGAAATTTGGACTGACACAAAGCCAGATATTTTGATAAGTGGGTTTGTCAAAGCAGGAATATTTCCATTTAACCGAAACGTCATACCCCAAGAGATATTTGAACCGGCAGCATTTAAAAGATGGACATCTTTACAGAATCAGGAAAGTCCTAATGAACCAACGACAACAACTTTACAAGCCCATGATCCAAAACCAACAACTTCAACCTTTCCTCAACCTACAATTTCGGTAATCAATATACAACATCAAGATCATCTGAATAGTGTAGACAAGACTGTCAGTCAGATTTCTGCAACGgatactgaaaataataatttaccaacAACTTCTGTTAGTTTTGAAGACTTgctattaaaatcaattaaacgaGATCAGCCTCCTTTGAAACAGTCGAAAAGAAAAATTTGCTTAGGGGCAGAAGTAATCACACGGGAAGACATGGCACATTTGCAAGAAAAAACAAAGGGTAATAAATTACAGAAATCTAAAaaggtaaataagaaaaaagtaaggAGACATAGTTCCGACGAAAGCGACTTAGAATCATGGAAAAGCGATTCCAGTGATCCTCGAATAACGGAATTCGATGAGGACTGTGAAATGGATGAAGAAGAGGCCCTTACTGATCAAAACCTAAATTTACTGAGCAAAGAAAACTTGGATACGAGTACTGAAGATATTCCAATTCTCAAGATTCAACCGGGTGATTTTGTTTTAGgtaacttttttggaaaaaagaaaAGCTATAAGTACGCATGTCTTATAACGGAGGTTTTTGACGATGAAGTCTCAGTGATGATACATTTGAATTTAGATTAG
- Protein Sequence
- MVRTYVRKTQRGCGYSKEDLKIAVSSVKNGLMTTYRASLVYNIPKNTIRDHVSGRRGKKSMTYGRRTDLTPEAEKSLVNCIRCLQKWGFGLTRKEVLEIVAQYVKINNINTQFKHGIPGEDWFLNFKRRHNLSIKMPQNVEFARKKNIDPFLIYQYFDLLEKTLKDLNLENRPSQIWNMDESSFCSDPSKTKIVGQRGLPATRTTSGPGKQNTTVLMCGSASGEKAPPLIIFKGKHVWDQWAAPPGSEYPNTTYAATANGWMESTVFKNYFEKSFIKHLSPDRPVLVVYDGHATHLSVEVIKIAIENQITILKLPPHTSHILQPLDLSVFKSLKSRWDVKLVEWQRKNVGVKIPKSIFSKLIGEIWTDTKPDILISGFVKAGIFPFNRNVIPQEIFEPAAFKRWTSLQNQESPNEPTTTTLQAHDPKPTTSTFPQPTISVINIQHQDHLNSVDKTVSQISATDTENNNLPTTSVSFEDLLLKSIKRDQPPLKQSKRKICLGAEVITREDMAHLQEKTKGNKLQKSKKVNKKKVRRHSSDESDLESWKSDSSDPRITEFDEDCEMDEEEALTDQNLNLLSKENLDTSTEDIPILKIQPGDFVLGNFFGKKKSYKYACLITEVFDDEVSVMIHLNLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00847503;
- 90% Identity
- iTF_00847485;
- 80% Identity
- -