Basic Information

Insect: Kuschelorhynchus macadamiae
Gene Symbol: clz9
Assembly: GCA_030620095.1
Location: JAUTXW010000598.1:1761162-1767719[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.9e-07 5.5e-05 25.7 0.0 3 38 258 294 256 299 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.9e-07	5.5e-05	25.7	0.0	3	38	258	294	256	299	0.87

Sequence Information

Coding Sequence: atgtcaGGGCGGAAGTATTTAAGTGGTAGTCAAAAACGCAAAATAAAGGAACAAAAAGTCAAAGATATATCAAAATGTGCAAAATTAACCAGCTTTTTTCAATCTGAAGAAGTCGGGGAATCATCCAAAGAATTGAGTTGCACGGAAGATGGAAATGTAACGGATAGTCTACTAATTGAAGATGAAGAGCAAACTCGAGACAACGAAGATACCAGAAAACAAGCCGAAAATCTTGTTCAGATTGTTGAGAATAAAGACGAGTGTATTCAAGAACGACTAGAAAAAAATTCTGAAACTAGGAAAATTGTTGATGCAAATGGAAACTATAGTGATATAGGATTTTGGCCCAAGGTAATTACTCCTGAATTAACAGATTTTTGCCTAAGTCGACTAtctatgttttttcaaaataaaaatgaaactaattcATATCCAGAATCCAAGCAAACTTATAAAGatcaaaGAGCAGCATTTTGTTTACCATGCAAATTATTTCCCAATCCAGGCAATAGTTTAGCTTTGGCATCTGACGGCTGTAGGGATTGGAAAAACATAGGAAAAATTCTTTTATCCCATGAAGAGTCCAATGATCATAAGCAAGCCTTGATGGCCTATCTCACACGAAAATCAAGTAAGGGTACAATAGACATGGAGTTAAAAGAACAGGCAACAAAAACTGCAAAATACTACTACAATATTTTAGAACGGGTGGTAGcggcaataaaatttttatctgaAAGAGGTTTGCCACGgaaaaaaaagtattcaaaagacGCGGTTAAACAAGCTCTTGAAGAAATAAAGCAAGGTAAGGTGTCTGTTTATAAAGCCTCCCAAATTTACGGAATACCACAAATCACATTAAAGGACAAGAAAAAGCAAAAGGATATTTTCAAGACAAGTGGAAAGCCGCCTATCTTAACACCTGAAGAAGAAAACCTAGTAGTTGATTGGATCCATTTTCTGGGAGATGCTGGATTTCCAGTGTCTAGAGCTCAACTAATTGACGCTGTATCCACATTGATTAAAAACCTAAATCGTCCTAATCCTTTTAAGGGTGGGAGACCAGGAAAACATTGGTACCAGGGATTTCTAAAACGAAACAAAGATGTGTCTTGCCGAGTAGCACAAAACCTAACTTCAAGCCGAGCTGGAGTAACTGAGGAGGCCATTAGGAATTGGTTTGTGAAGGTGcatgaatattttgtaaaaaacggAATAACGGAAGTTTTAGGAGACCCTAGCAGAATCTATAACTGTGATGAGACCGCATTTTTTTTAACTCCGACAGAAAAACAAGTGCTAGTGAAAAAAGGTTCCAAGACTGTTTATAACAGAGTCATAAATGATGATAAAGAATGCCTCATAGTTTTAGCCAACATTTCTGCGAACGGTCAAGTAGCGCCGCCGATGGTGGTATTTCCATATAAGTCcaggatgccaaaaaatatcccGCCATCTGTGCCAACTGGTTGGGGATGTGGATATACTGAGAGTGGTTGGATGAATACGGAAGCATTTTTTGAATATGTAACTAACGTCTTCTTTagctggttaaaaaaaaacaacattacacTGCCCGTCGTACTTTTCCTTGATGGCCATACCAGCCATATTTCATTGGCATTAAGTGAGTTCTGCAAAGCAAATGGAATTGTATTGGTAGCATTGGTTCCGAATTCTACCCACATCATGCAGCCATTAGATGTAGCAGTGTTCCGTCCGGTTAAAGCTACATGGCGAACAATAGTTCATGATTTTAGAATTAAACatgaattcaacaaaattaaacgaaCGGATTTTTCCATGCTGGTAAAAGAATGTTTTGATAAGACCTTAAAACCTAAAACAATTCAAAGTGCATTTGAATGTACTGGATTATATCCGTTCAATGTCGAAAAGATTAAATTCGAGAaactccaaacaaaaaaaaatccacttCCACAAGTCACATCTCCACAGGCCTCTTCCGAAATCGCTGCACCAGGCCCAGATTTTCGAAAAGAGTTTGAAAGCAAACTATCGCCTGAAACACTACGCCAGTTTAAACAATCTTTTAATTCAGGTTGGTCAGGAAATTCATCTTATACCAAACTTTTTGAATTCTGGAAATCACTTAACCCTGAAGAGCAAGTAAATCACCAGCTATTATCGAATTCGCCATTAAGTGAAACTGCACAACATATTGTCCAAGATCGTGAAGAGCTTCTACATGATGATAACGAGACCTCGTTACATGAGTTAGGTGACTCGACACTAATTAACAACATAAACGATTATGAGGATTTTGGTATGTTTAGCATTGGACAAGATGGCTTTTTAGAACTGGATGCCAGTGCGGAAAATGAAATTTTGGACCTAAACAAATGCGAATCCATGACAACTGATAATTCAAACAAAAGCCATATTATAAAATCAGCAGACCAAATCATTAAAACAACCTTAGAACCTAAATCACCAGTAAAATTAACTTTGTCTTCAAAACCATGTCGTAGTAATTCAGCTGATAACAATACCacaaacaaaattcaaattttaaaaatagaatacctTGAATCAACTAAGCTTCCAAACAATTCAGTCAATGACCATAATTTTCTTACGCCTCCCAGTCAAACTACCTCCGTAAAATCCGATGTTAACGACGCTACAGTCAATGATAAagaaaatattcctttaaataataatttgcttaCACCTCCAATCAAACACTTTCCGTAA
Protein Sequence: MSGRKYLSGSQKRKIKEQKVKDISKCAKLTSFFQSEEVGESSKELSCTEDGNVTDSLLIEDEEQTRDNEDTRKQAENLVQIVENKDECIQERLEKNSETRKIVDANGNYSDIGFWPKVITPELTDFCLSRLSMFFQNKNETNSYPESKQTYKDQRAAFCLPCKLFPNPGNSLALASDGCRDWKNIGKILLSHEESNDHKQALMAYLTRKSSKGTIDMELKEQATKTAKYYYNILERVVAAIKFLSERGLPRKKKYSKDAVKQALEEIKQGKVSVYKASQIYGIPQITLKDKKKQKDIFKTSGKPPILTPEEENLVVDWIHFLGDAGFPVSRAQLIDAVSTLIKNLNRPNPFKGGRPGKHWYQGFLKRNKDVSCRVAQNLTSSRAGVTEEAIRNWFVKVHEYFVKNGITEVLGDPSRIYNCDETAFFLTPTEKQVLVKKGSKTVYNRVINDDKECLIVLANISANGQVAPPMVVFPYKSRMPKNIPPSVPTGWGCGYTESGWMNTEAFFEYVTNVFFSWLKKNNITLPVVLFLDGHTSHISLALSEFCKANGIVLVALVPNSTHIMQPLDVAVFRPVKATWRTIVHDFRIKHEFNKIKRTDFSMLVKECFDKTLKPKTIQSAFECTGLYPFNVEKIKFEKLQTKKNPLPQVTSPQASSEIAAPGPDFRKEFESKLSPETLRQFKQSFNSGWSGNSSYTKLFEFWKSLNPEEQVNHQLLSNSPLSETAQHIVQDREELLHDDNETSLHELGDSTLINNINDYEDFGMFSIGQDGFLELDASAENEILDLNKCESMTTDNSNKSHIIKSADQIIKTTLEPKSPVKLTLSSKPCRSNSADNNTTNKIQILKIEYLESTKLPNNSVNDHNFLTPPSQTTSVKSDVNDATVNDKENIPLNNNLLTPPIKHFP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -