Kmac042004.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010001318.1:1088838-1093051[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-07 3.8e-05 26.2 0.1 4 38 84 118 81 122 0.94
Sequence Information
- Coding Sequence
- ATGCTGCTGATATTGCAGGTTCCAGTAGTGACATTCAATATTTATGCCCTGGATGTGAGGAGGAATATAGTGGCCCACCATCTGAAAATTGGTTGTAATGTTGTCAGTGTCTATCATGGTGGCATGAAGCATGCAGCAACTATGAGGGTTTTGGCAGTTTTAATTGTGATCTTTGTGGATAGTCATCTTACCCCAAGAGcattatGGACGAATCAAGGTCCATCCAACATTGGAAAACCCAGTGCTGCAACAATGAGAGAGGCTCTTTACCGTATATTTGAAGGTGGTTGGAGTGTTAAAAAAGCGGCCCAGGAATTCAAGATCGCAAGGACCACCTTAAGACGTTATAAATCAAAATGCGAACGAGCGGGAGTTGATGCTGATTTTGCCAACATGGATGTAGGGAGAACACCACGACTTACACCAAATTATGAAGTCAACAAAGTGTTCAGCAAGTCTGAAGAGGAAAAACTTACAGATTATTTGAAGCAGATGGCGAATTTGCACTACGGGTTGAGTCCAACGCAAGTACGATTTTTTGCTTATGAATTAGCTGTTGCTTTTGATAAGAAGATTCCAAACAATTGGAGGAAGAATAAGTGTGCTGGAAAAAActggttttataaatttatgaaaagaaataGGAGCATTTCTATTCGATCTGCTGAAGCAACGTCCTTGGCTAGAGCAATGGGATTTAATAAACCAGTTGTTGATAAGTTTTTCACAAATCTTAccgttttatatgaaaaatataaatatattcctGCCCAAGTATATAATATAGACGAGACTGGCCTTACAACAGTCCAAGGCTCCAGTAAAGTTATAGCGACCAAGGGCCAAAAACAAATAGGGAAAATAACATCAAGTGAAAGAGGCACTCTTGTTACCATGATTGGAGCCATCAATGCAATAGGTAACTCTATCCCGCCTTTCTTAATATTTCCGcggaaaaattttaaatcacaTATGCTTAAAGGTGGACCACCTGGAGTACAAGGTGATGCTTCTCCCAGCGGttggataaataaagaaatatttcataaatggtttcaatattttatcaacCACGCTAGACCAACGGCAGACTTCCCGGTTCTTCTACTGATGGATAACCATGAGAGCCATATTTCTCTTGACGTTATtaaaatggctaaacaaaataacgTGCAGCTTCTAACATTACCGCCACATACAAGCCATAAACTCCAGCCCCTGGATAAATGTGTTTATGGCCCATTAAAACGACAATACAATAATGAATGCAATAAGTGGATAACTAACCATCCTGGTCTAAGAATAACTATCTACGATATAAGTGAGATATATCCATTGGCTTTTACAACAAACAATATCGTATCGGCGTTCAAACACACTGGAATATGTCCACTCAACAGTGCCATTTATGATGAAAGCGAGTTTATTCCAGCATCTGTAACAGATCAACCTCTACTTCAAGAAAATACCCAAAACTCACCCCATGCAGGACCCTCAAATGAAGGACGTACAGATGTTGAAAATGCCAATGTAACACAAGGAACTCATTTATACTTTTCACCGGAGACTATTGCACCATATCCGAAAGCTAACAAATGTAAGAAAACCACACTAAATAGAAAGAAAAGGAGCACAGAAATTCTAACTAGCACCCCAGTTATGGAGAAGTTTCAAACTGAAGAGATAGTAAAGAAAACGGTAGTAAAAAGAGCAGTTTTTCAAGATGAGGACGATTTACCCCTGAAGTCTCtgataccaattaaaaaaaagaaaaataacaaacgGCCCAATTCCAGTTCTTCTAGTGACAGCGACGATAATATTTCATATGCCTCGTCAACGTGTACCGAATCGTTTGAAGGGGAGGACAATATGACCTTAAATCAATTAGATGACATAAAGGTTAACAGTTTTGTCCTtgtaagatttcctacaaaaaaaactatcaaatattacgtaggtcaAGTTACCGAAATTCATCCTCAAGACGATGAATATGATGTGTCATTTTTACGATACCAGCATAAGAAGTTTGTTTTCCCCTTAGTTCCAGACATTTCCACCATCATGAAGAGGGATATAGAAATTGGGCTTCCTGAACCAAGTGTCACTGGGGGCACTTCAAGGATGAACAATTCATTTGTGTTTTCTATTGACTTAAGTAGTTATAATGTATCATAA
- Protein Sequence
- MLLILQVPVVTFNIYALDVRRNIVAHHLKIGCNVVSVYHGGMKHAATMRVLAVLIVIFVDSHLTPRALWTNQGPSNIGKPSAATMREALYRIFEGGWSVKKAAQEFKIARTTLRRYKSKCERAGVDADFANMDVGRTPRLTPNYEVNKVFSKSEEEKLTDYLKQMANLHYGLSPTQVRFFAYELAVAFDKKIPNNWRKNKCAGKNWFYKFMKRNRSISIRSAEATSLARAMGFNKPVVDKFFTNLTVLYEKYKYIPAQVYNIDETGLTTVQGSSKVIATKGQKQIGKITSSERGTLVTMIGAINAIGNSIPPFLIFPRKNFKSHMLKGGPPGVQGDASPSGWINKEIFHKWFQYFINHARPTADFPVLLLMDNHESHISLDVIKMAKQNNVQLLTLPPHTSHKLQPLDKCVYGPLKRQYNNECNKWITNHPGLRITIYDISEIYPLAFTTNNIVSAFKHTGICPLNSAIYDESEFIPASVTDQPLLQENTQNSPHAGPSNEGRTDVENANVTQGTHLYFSPETIAPYPKANKCKKTTLNRKKRSTEILTSTPVMEKFQTEEIVKKTVVKRAVFQDEDDLPLKSLIPIKKKKNNKRPNSSSSSDSDDNISYASSTCTESFEGEDNMTLNQLDDIKVNSFVLVRFPTKKTIKYYVGQVTEIHPQDDEYDVSFLRYQHKKFVFPLVPDISTIMKRDIEIGLPEPSVTGGTSRMNNSFVFSIDLSSYNVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00847171; iTF_00847362; iTF_00847107; iTF_00847204; iTF_00847111; iTF_00847176; iTF_00847177; iTF_00847209; iTF_00847179; iTF_00846990; iTF_00847121; iTF_00846995; iTF_00847162; iTF_00847119; iTF_00847313; iTF_00847096;
- 90% Identity
- iTF_00847096;
- 80% Identity
- -