Kmac073701.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010003002.1:388970-390793[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-07 3e-05 26.5 0.0 3 39 12 49 10 52 0.90
Sequence Information
- Coding Sequence
- atgtctgcaaaaaaaagaaaacaatgggaTTCTGACAATATGCAAAAAGCCATAGAAGCGGTTAAGAGCAACAGTTTAGGCTATTTGTCTGCTGCAAAACGTTATAATGTCCCTCGTGCTACACTTCACCGTTTGTGTAAGAAGGAGGGTTCTCCTGACACAGTTTGTAAAACTACTTTGGGCAGGAAACCAGTGTTGCCACCGGAATTGGAAAGAGAACTTGTAGAATATTTGTTGCTTATGGATAAGAAGTATTTTGGTTTAACTCGAAACGATTTAAGAACTATGGCTTTTCAGCTGGCTCGCCGTAACAATCTGGCACATCCGTTTTCATTATTACGCGAGTCCGCCGGAAAAGATTGGCTATACTCTTTTAtgaaaagacataaaaataaattaagttttcgaaAACCAACTGGAACTTCTTTGAATAGAGCTCTTGGTTTCAACAAGGAAAGTGTCAACGAGTTTTTTGACCTTCTTGAGCaagttatggaagaaaataattttcccgCTGATAGAATTTACAACGTTGATGAAACGGGACTATGCATTGTACAATCAAAATGTCCCGTGGTTATTTCAAAGAAGGGCAAACGACAAGTGGGTGCACTAACATCGGCTGAGCGAGGCCCTTTAGTGACAGCAGTTTTATGTATGAATGCTGCAGGTGGGTTCGTGCCACCCATGATTATTTTCCCTCGTAAAAATGCAAGTGAGCAGCTGAAGAAGGGAGCTCCTCCAGGAACGCTATTTGCCTTTCACCCTTCAGGATGGATACAAACCGACTTATTTACTAAGTGGTTCCAACATTTCTTGGAAAAAGTAAAACCCAGCGAAGGTAATCCAGTTCTTATATTAGATGGCCATCACACTCATACGAGAAATTTGGATGTGGTTATAAAAGCTCGAGAGAGTTTTATAACGATTTTATGCTTGCCACCGCATACTTCCCACAAAATGCAGCCACTCGATAAAACCGTTATGGGTGCCCTAAAAACGTTTTACAATGAGGAAATCAGAATCTTTATGCGTGACCATAATAGAGCCACTGCAGAAAGATCAATAAAAGGATTTAGCACAACTGGGATATATCCGATTCGCCGggatattttttctgacgaagaatTTCTTCACGAAGCCCAAAAACACCATGGCGCACATCATGTAACAGGAGATTCGTCTGTAAACGAGGGACCAGACTTCGATTTACAACCAAGTATTCTTCCCAAGGATATCGAGCCCATACcagaacttaaaaagaaaattggcactAGGGGAAGAAAACCTGCTCGGGCAAAGGTGATTACCTCAACACCCAATAAGGACGAATTAGAGGAATCTATGAGCACATCGCGtgataaagttaaaagaaatattgttgatAAAGCTGGTCCTAGTTCCTGTTCTATCAAGGAAAAGCGAAAAATAATCAAGAAAACTGGTCCAAGTTCCCGTTCTGTCAGaaagaagcaggatttaccatcaACTTTATCACCCGCATCGTCTGATGATGATTTACTCTTATCATCCCTAGTTAGCCAGAAAGAGGTTGATTTGGAAACCTCCTCTGATGATGAAATACCACTATCATCTTTTGTCAGAAAAAAGTCGGCCGGTGATGACACAGAGTGTATTTTTTGTCAAGAACAGTTCGCAACTAGCAAGAGCAGAGAGATATGGGTGCAATGTGCAATTTGCAACGGCTGGGCGCATGAAGCGTGCTCACTTATGGAAGCTGATGTGTTTGTATGCgacttttgcaaataa
- Protein Sequence
- MSAKKRKQWDSDNMQKAIEAVKSNSLGYLSAAKRYNVPRATLHRLCKKEGSPDTVCKTTLGRKPVLPPELERELVEYLLLMDKKYFGLTRNDLRTMAFQLARRNNLAHPFSLLRESAGKDWLYSFMKRHKNKLSFRKPTGTSLNRALGFNKESVNEFFDLLEQVMEENNFPADRIYNVDETGLCIVQSKCPVVISKKGKRQVGALTSAERGPLVTAVLCMNAAGGFVPPMIIFPRKNASEQLKKGAPPGTLFAFHPSGWIQTDLFTKWFQHFLEKVKPSEGNPVLILDGHHTHTRNLDVVIKARESFITILCLPPHTSHKMQPLDKTVMGALKTFYNEEIRIFMRDHNRATAERSIKGFSTTGIYPIRRDIFSDEEFLHEAQKHHGAHHVTGDSSVNEGPDFDLQPSILPKDIEPIPELKKKIGTRGRKPARAKVITSTPNKDELEESMSTSRDKVKRNIVDKAGPSSCSIKEKRKIIKKTGPSSRSVRKKQDLPSTLSPASSDDDLLLSSLVSQKEVDLETSSDDEIPLSSFVRKKSAGDDTECIFCQEQFATSKSREIWVQCAICNGWAHEACSLMEADVFVCDFCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00847140;
- 90% Identity
- iTF_00847140; iTF_00847106; iTF_00847141; iTF_00847142; iTF_00847144; iTF_00847148; iTF_00847149; iTF_00847157; iTF_00847129; iTF_00847193; iTF_00847118; iTF_00847136;
- 80% Identity
- -