Kmac079451.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010003359.1:37310-37648[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-07 1.9e-05 27.2 0.1 3 39 17 53 15 59 0.86
Sequence Information
- Coding Sequence
- atGGTGCGTTCCTACAAGAAAAAGCTCCCAAATCCCTCATATTTGGAAGAAGACGTAAAAGTGGCCGTGCGGGAATATATGGCTGGTCGAATGACTATTTACAGAGCACACAAAACCTATAATATACCTTATTCGACAATATACAGCCGTGCGAAAGGTCTTCGTGGTGTAAAAAAGCAAACTAGAGGTCGACTGACTGTCTTCACTCAAGAACAGGAGAAACAATTGGCTACAGCACTAAAAACTATGAAGAAGTGGGGATATGGCTTGTCAAAAAAAGAGGTGTTGCAGCAAGATGCTAATTATGTgagggaaaacaaaataaaagactCCTTTTAA
- Protein Sequence
- MVRSYKKKLPNPSYLEEDVKVAVREYMAGRMTIYRAHKTYNIPYSTIYSRAKGLRGVKKQTRGRLTVFTQEQEKQLATALKTMKKWGYGLSKKEVLQQDANYVRENKIKDSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00847206; iTF_00847037;
- 90% Identity
- iTF_00847206;
- 80% Identity
- -