Kmac018132.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010000457.1:246144-248063[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-07 1.9e-05 27.2 0.0 4 41 17 55 15 57 0.93
Sequence Information
- Coding Sequence
- aTGCCGGGAAAGCGTAAATATCGGCGTTATGATGCCGAAGATAAACCACGACTTGAAGCGGCATTAGCTATGATAAGACAAAATAGAATTAGTCTTTCTAAAGCCAGCAGACAATTCGGTTTTCCAAAAGGTacgttatcaaataaattaaacaatcgtCACGGAGGAAAAGTGGGGAAACCGTTTGTTCTTCCTGTCGAAATGGAAAATGCAATCGTCCAACATATCCTAGTTGTAAGCGAATGGGGGTTTCCTTTCGATTATTCAGATTTGGCTCATTTGGTACAGCAATTAATTATTAGGCACGGCTTAGAGGCTTCTCAACTTCAGGAAAATAAGTTACCCAGTAGAAAGTGGTGTCAAAGATTTATTCGGAGACACAAAAATGATCTCACTTTAaggatttgtcaaaatttaaaaaaatcgaaggcAAGCGTTACACCTGAAAATATGGCAGACTACTTTACTAATTTAAAAGAGATCATTTTTGACAACAACGAGCCTCTACCTCCGAATAGAATCTTCAATTACGATGAGACCAATTTATCCGATGACCCGGggactaaaaaatgtatttttcgtaaaGGCATAAAATACCCTGAGCGCATCAGGGATTCGTCAAAGAGTAGCGTTTCCGTAATGTTTTGTGGATCTGCGGATGGACATGTACTTCCACCATACGTGGTATATAAAGCAGAGAATCTGTGGCAAACCTGGACTGAAGGCGGACCGAGATGCACCAGATATAACCGTAGTAAGAGCGGTTGGTTTGACGCAGTAATTTTCGCCGATTGGTTTTTGAATTCGTTTATACCTTTTCGAAAAAGAATTGAAGGGCGAGTCGTGCTTATAGGGGACAATCTCTCTAGCCATTTCTCTGAAGATGTTTTAAGAGGAGCccaagaaaacaatatttcattctgCTGCCTTCCTAAAAATTCTACCCACCTTGCACAGCCCCTTGATGTTGCCTTTTATGGGCCATTGAAGCGAAAGTGGAGGTCTATATTAGATGCATGGAagcaatccttaaaaaaaaagtcgCAAGTGTTGCCCAAAGAAAAATTTCCCggattattaaaaacattatgtgATGCTGTTGCACTTGATAATAAATCTGATAATTTAGTATCAGGATTCAAAAAATGTGGGATTTTTCCGTGGAATCCTGAGGAAGTATTAAGCCGATTTCCAAAGGAGCCTACTGAAGATAACAGCAATTCTCAGGTGGTTTCTGAGGTCGTCATAGATATGCTAATGAATATGAgatatggagaaaaagaaaatgccccagccaaaaaaagatctaaaatagATGTAGCTCCCGGGAAAAGTATTGCTTTTGAGGATCTTGTCCAACTACGGAATGACAACCCATCGAGTCGCCCATCAACCAGCAAAGGGATTGCCGAAAAAACTTTAAAGAACAAGAAGTCAGCATtaagcaaaaaagaaaactactcatcaggaGATAGTGATGGCGATAGCGGTGAATCAGACAATATAATGTATATGAATTCGTCGGAAGATGAGGACCTTACTGCAATAGTCGAGAAAGAACGGGAAGCCCTGTGCCTTAGCTCAGAAGAAGACGACAGTTCAACCCACAATACTTCTCTTCGCACAGAAACTGATTCTCCTGCTTATAAATTCGTATTGGCCGAATTTATATACAACGAAGGAACAAAaaaggaagtcaaaaaaatattcgtcTCAAAAATTATCGCCAAAGATAAAAATGGCTTCAAACTCAGTTGTCTTCGACGATATGGGCAAAAGCCGTCAACCCCCAAAGTAGAAGACGAGTCATATATTGAAAAGGGCCAAGTAAAAAGAACGTTGAGAAATCCCCTAGAGCTTAGAGGCCGTTTTACATTCAACGAAGACAAGCAATGTCCAATAAAGTTGTGTTCATTTTAA
- Protein Sequence
- MPGKRKYRRYDAEDKPRLEAALAMIRQNRISLSKASRQFGFPKGTLSNKLNNRHGGKVGKPFVLPVEMENAIVQHILVVSEWGFPFDYSDLAHLVQQLIIRHGLEASQLQENKLPSRKWCQRFIRRHKNDLTLRICQNLKKSKASVTPENMADYFTNLKEIIFDNNEPLPPNRIFNYDETNLSDDPGTKKCIFRKGIKYPERIRDSSKSSVSVMFCGSADGHVLPPYVVYKAENLWQTWTEGGPRCTRYNRSKSGWFDAVIFADWFLNSFIPFRKRIEGRVVLIGDNLSSHFSEDVLRGAQENNISFCCLPKNSTHLAQPLDVAFYGPLKRKWRSILDAWKQSLKKKSQVLPKEKFPGLLKTLCDAVALDNKSDNLVSGFKKCGIFPWNPEEVLSRFPKEPTEDNSNSQVVSEVVIDMLMNMRYGEKENAPAKKRSKIDVAPGKSIAFEDLVQLRNDNPSSRPSTSKGIAEKTLKNKKSALSKKENYSSGDSDGDSGESDNIMYMNSSEDEDLTAIVEKEREALCLSSEEDDSSTHNTSLRTETDSPAYKFVLAEFIYNEGTKKEVKKIFVSKIIAKDKNGFKLSCLRRYGQKPSTPKVEDESYIEKGQVKRTLRNPLELRGRFTFNEDKQCPIKLCSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00847081;
- 90% Identity
- iTF_00847074; iTF_00847079; iTF_00847143; iTF_00847082; iTF_00847146; iTF_00847083; iTF_00847086; iTF_00847087; iTF_00847091; iTF_00847123; iTF_00847092; iTF_00847093; iTF_00847065; iTF_00847069; iTF_00847295; iTF_00847077; iTF_00847081; iTF_00847084; iTF_00847085;
- 80% Identity
- -