Basic Information

Insect: Kuschelorhynchus macadamiae
Gene Symbol: clz9
Assembly: GCA_030620095.1
Location: JAUTXW010001311.1:1719037-1720860[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.8e-07 2e-05 27.1 0.0 1 42 18 60 18 63 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.8e-07	2e-05	27.1	0.0	1	42	18	60	18	63	0.92

Sequence Information

Coding Sequence: ATGCCAagggaatataaaagaaaacttgggTCTCGGCGATACATGGACTACAGCCCTGAAGATCTTGCTAGGGCCGTCCAGGCAGTCAAAAGGGGTGTTATGAATAGCACGGAAGCAGGTAAGTTTTTTGGTATACCAAGACGAACCATAGTAAATAAAGTTcagaaaaaacatatgaacaaatCGGGTGGTCAAACAAGTTTATCCGAAGCAATGGAGAGAACATTGACTGATGTATTAATTGCCGCAGCAGAATACGGCAGCCCGCTGACAATGTACGACTTGCGCATGGTTGTAAAATCCTATTTGGATATGGAAGGCATgtctataagcaaatttaaaagtaatattcctGATAAGGAATGGTGCCTGGCTTTCATTAAAAGGAACAAACAGCGGCTGACAAATAGGACGTGCCAGAATATTAAGAGAAATAGAGccgaaaaaacagaagaagaaataaataattattttaaaaatttacaacaacatATTATGGACATTCCACCTGACCAAATACTcaactacgatgagacaaatgTTACGGACTATCCGGGTgcggttaaatgtatttttcacagAGGTACAAAATATCCAGAAAGGATCATGAACTCAACCAAAAGCTCTATATCAATCATGTTTGCTGCTACTGCCTCAGGCAAAGTGCTGCCACCGTATGTTGTCTACAAGGCAGAAAGATTGTACGATCAATGGTGCATAGGCGGCCCACAAGGATGCAGGTTCAATCGCACAAAGTCGGGCTGGTttgatcaattttgttttcaagactGGTTTGAGAAAATAGTAATTCCTTGGGCAAAAACCTATGAAGGTCCAAAGCTGGTTATTGGTGACAATTTGTCGTCTCATCTAAATGTAGCTGTTTTAAGGATCTGTCAACAATATAACTTACGATTTACTTTCCTTCCCCCAAACTCCACTCACCTGACACAACCACTTGATGTGGGATATTTTCGTTCATTAAAGGCAACTTGGCGAagtatattaacaaattataaattaaaaaatccccgGGATAAAGCACTTAACAAGTCCACCTTTCCAAGCCTACTGAAAAAACTTATGGATAAAATGGAGATTAATAATacggaaatatttaaaaatgcttttagagcCGCTGGAATTTACCCCTTGGATAAAAGTCAAGTCTTCAAAAGGATGCCGAAAAAACGTGTAGAGCAGAGAATAAGTGGATCAATAGATCAAGCGTTATTGCAGTACTTAGAGGAGAAGAGGCGTCCAAGTACTGATTCTCAGCCAAAAAGGaagaagatgatcaatattgagcCTGGTCGGTCGGTTTCTCTAGACGATATCGATAGAATGTCAGCTGGTCCTAGTAACGtcaaaaaatcgaaagaaaacCACAATACTGACGAGCTAACAACTACAACTGTAGAAGAAAATGGCAAGGACACGCCAAGTATTAGCAGCGATGAAAACGAATATCCGAAGCCAATGGATGATGTTACACTTGAAAGTGATGAAAGCAACAACGAAAATGGGATAGATACAAAAATACACAACAATGATTTTCTGATcgttaaattttcgacaaaaaaatcaacgaaatattatataggaactgTTTTGCAACAGAGTGACGAAGGCGAAGATTTCTTGAcagttaagtttttaagaaaaaaaactgataacaaatttgtttttccacTGGTAGACGATATAAGTGATATTCATAGGACTGAAGTTATGTTAGTATTACCAAAACCAACGTGCCCTTCCTCTTCAAGGAACATTTTCACATttgattcaaatataataaatgactttaatcTAATGTAG
Protein Sequence: MPREYKRKLGSRRYMDYSPEDLARAVQAVKRGVMNSTEAGKFFGIPRRTIVNKVQKKHMNKSGGQTSLSEAMERTLTDVLIAAAEYGSPLTMYDLRMVVKSYLDMEGMSISKFKSNIPDKEWCLAFIKRNKQRLTNRTCQNIKRNRAEKTEEEINNYFKNLQQHIMDIPPDQILNYDETNVTDYPGAVKCIFHRGTKYPERIMNSTKSSISIMFAATASGKVLPPYVVYKAERLYDQWCIGGPQGCRFNRTKSGWFDQFCFQDWFEKIVIPWAKTYEGPKLVIGDNLSSHLNVAVLRICQQYNLRFTFLPPNSTHLTQPLDVGYFRSLKATWRSILTNYKLKNPRDKALNKSTFPSLLKKLMDKMEINNTEIFKNAFRAAGIYPLDKSQVFKRMPKKRVEQRISGSIDQALLQYLEEKRRPSTDSQPKRKKMINIEPGRSVSLDDIDRMSAGPSNVKKSKENHNTDELTTTTVEENGKDTPSISSDENEYPKPMDDVTLESDESNNENGIDTKIHNNDFLIVKFSTKKSTKYYIGTVLQQSDEGEDFLTVKFLRKKTDNKFVFPLVDDISDIHRTEVMLVLPKPTCPSSSRNIFTFDSNIINDFNLM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00846977; iTF_00846947; iTF_00847336; iTF_00847049; iTF_00847018; iTF_00846957; iTF_00846960; iTF_00846962; iTF_00846968; iTF_00846969; iTF_00846778; iTF_00846971; iTF_00846972; iTF_00846941; iTF_00846974; iTF_00846975; iTF_00847040; iTF_00846934; iTF_00846970; iTF_00846911;
90% Identity: iTF_00846934;
80% Identity: -