Kmac078557.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010003302.1:297668-298519[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-07 1.7e-05 27.4 0.0 2 39 16 53 15 59 0.87
Sequence Information
- Coding Sequence
- atggTACGTAACTACGTAAAGAAAAAACCCGAGCCTTCGTGGGCAGAAGAAGACATGACCAGGGCACTGGAAATGATCAACCGAAACAAAATTTCAGTTCGACAAGCAGCTCAACGTTTTAAGATACCTAAGATCTATATTTTGCgccgaaaaaataatgaaatgatgccaaagacaccaagaaatgatcattttaaacaagtgtttactGACCAACAAAAAACTGAACTACTGGAGCATATTCTAGACCTAGAAAAGCGATTTTATGGAATAACCCCTCTCGATGCTCGTCGATTTGCATTTGAGCTGGCAGAAAATATGGGCTTGAAACATCCATTTAATAAGAATGCCAAATTAGCTGGTAGTGACTGGTTGGCGgggtttaaaaaacgaaatcctcaactttctattagagctcccgaagccacaagcatagcacgagctgcaggatttaataagccccaggttcaaaagttttttgatgttgtaCGATCAGTTTTAGAGAAGAGCAATATTCAACCAggccaaatatataatattgatgaGACTGGGATTAATTCAGTGCCTGTGCCCAGAAAAATTCTAGCTCAAAAAGGAAAAAAGCAGGTTGGGCGGATAGTGAGCACTGAACGTGGGTTTAATGTAACTGCAGTTTGTGGGATTTCAGCTGCAGGATCTTACGTCCTtccgttttttctttttcctcgacAGCTAATTGACCCATTATTTATGAAAGGATGTTCGCCGAGTGCAGATGGCTATGCAAATGGTTCTGGATGGATGGATTCCGATCATTTCGTCAAGTATTTAGATCACTTTATTAACCATGTGGAACCCGGTCCCGAtaagtaa
- Protein Sequence
- MVRNYVKKKPEPSWAEEDMTRALEMINRNKISVRQAAQRFKIPKIYILRRKNNEMMPKTPRNDHFKQVFTDQQKTELLEHILDLEKRFYGITPLDARRFAFELAENMGLKHPFNKNAKLAGSDWLAGFKKRNPQLSIRAPEATSIARAAGFNKPQVQKFFDVVRSVLEKSNIQPGQIYNIDETGINSVPVPRKILAQKGKKQVGRIVSTERGFNVTAVCGISAAGSYVLPFFLFPRQLIDPLFMKGCSPSADGYANGSGWMDSDHFVKYLDHFINHVEPGPDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00846404; iTF_01515929; iTF_00847035; iTF_00846302; iTF_00846303; iTF_00846631;
- 90% Identity
- iTF_00846303;
- 80% Identity
- -