Kmac000285.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010000010.1:121298-150044[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.41 28 7.4 0.0 14 39 27 51 17 54 0.84 2 2 4.8e-05 0.0034 20.0 0.1 4 38 766 800 763 803 0.94
Sequence Information
- Coding Sequence
- atgccacgtACAAGAGTGAGAACATCCAAGAGGGGTCCTAGTCGTGTTGATCTGCAACGGGCAACTTTACTGGTAGACCAAGGAGTGTCTGAAAGGGAAGCTGCAACACGTTTTCACATTTGCCATGTTACATtaaatagatatattaagaaaattaaaaatggcattGAAGAACCTAATGTTGGTTATTCCTCGCATAATAAAATACTGTCTTCAGAAGACGAATTGATATTTTGTGAATACATACGCCACTCAGCTGACCTTTATTTCGGGCTTTCACCTTCTGATGTTCGTTCCTTGGCATAtgaattttgtataagaaaaaacattaaagttCCAGATCAATGGCATACCACCAAAATGGGATCAAGAGAttggttttcaaattttatgaagaggaataacaCATTATCTATAAGAGTACCCGAAGCGACAAGTCATGCAAGGGCTATTAATTTTAACAGAACAAATGTCactaaattttttgacaatttggcGAGGGTAATGGAGAGCGGCATATTTGAGGCTGCAAATATATACAACGTGGATGAAACAGGAATAACGACAGTGCAAAAACCCTGTAAAATTGTATCTACTAAGGGTACCAAACAAGTAGGAGCCGTTACCTCTTCGGAAAGAGGAACATTAATTACCATTTGTCTTGCCGTGAATGCAATAGGAAATTCAATTCCGCCAATGTTTTTGTTCCCTAGGAAGcgatttaaacctttttttatgtcTAAGGCACCAAATGGTTCTATTGGAGAAGCTAACGGCTCCGGGTGGATGGATGCCGacaccttttttatatatataaagcattttGCAAAACATACCAGGCCTTCCCCTCAGAATAAGATATTATTGATATTGGATAATCATAGATCGCATCTGGGTTTGCAAATAATTGACTTCTGCCGAGAAAATGGAATTGTTCTTCTGTCATTCCCGCCCCATACGTCGCATAAATTGCAACCCCTTGACCGAAGTGTTTATGGGCCACTAAAAGTCTATCTAAACAGCTGTATGGACGCCGGGATGAAAAATAATCCCGGTCAAACAATGACTATTTATGACTTACCAGGGCTCGTTGCTGAGGCTCTACCGAAAGCTGCCACGCCGACGAATATATTAAGTGGTTTTAAAGTCACTGGGATCTATCCTTTCAATCGGGACGTCTTCCAAGACCACGAGTTTGCTCCTTCTCTACCAACCGATCAGCCACTTAATAACGAGGATAATTTAATTAACGAAACATCAGCTGAGCCAATGCATCCAATTGCTGAGGTCCAAACTGCGGAATCTCTGCTTCTAACAGCCTTttcacaagaaccaccctccATATCAAAAGAACCGACACCATCCACATCCAAAGGACCAATGCCTTCTATCTCGGAAGCATCGCCACCCTCCAGATCAAAAGAACCGACACCACCCTCTGTATCAAAAGCGCCGACACCGTCCACGTCGAAAGAATCGGCATCCTCCTCATCAAAAGAATTAACACCTTCAACATCGAAAGATGAGTTAAATAATTCCAAAGAAATATTGGAATCTATTAGGCCGTATCCAAAAGCTGCCAAACGTGCGAAAGTTACAAATCGAAGAAAGGGAAAAACAGCAATATTAACAGAAACCCCAGAAAAGATTGTGCTTGAAGAAGAAGAAGCAGCGAGGGCTAGGAAAACAAACGcgaaaaaagcgaaaaaaaatatttctaagaaaaagcAGAAGGAATCTCAGTTTAGCTCCTCAGATGATGACGACACACTTTGTTTGTATTGCTTGGGACCCTACTCTAACGACAGACATGGCGGTAGTCCAATTTCTAAGCACGAATCCAGTGCCGGCGAATGTGATAGTGATGAAAAAAACCCCGACATCATTCCGCAACCAGTGGATACTGACGATGGGTCGGATTATTCCCGAAAAAAGCAGCATGTATCGACTATCGAAACATCACCTAGCAGGAGTTTATTACACCAAGCTGGCAATTCTGGATACATGGGTTACTGTACTTTAAGGAATGGCATGCCTATGCATGAGTTAAACGCACAGTCTAAAATGCTTCCTGGCCCAACTCAAATGATTCCAGCATACAACACTTCATGTACCTTGCCACGCCAACCACCCCAGCATTGGCAGTACGGTCCTGTAAGTCATTTACCACCAGGCGTATACCCAATGCAATATCGAGGAGGACCTGTTGCTCAGCAAAGATTAAGATCGACCCAAGCAAGcattatGGACGAATCAAGGTCCAAGAGATCCATCATTGGAAAAACCAGTGCTGCAACAATGAGAGAGGCTCTTTACCGTATATTTGAAGGTGGTTGGAGTGTTAAAAAAGCGGTCCAGGAATTCAAGATCGCAAGGACCACCTTAAGACGTTATAAATCAAAATGCGAACGAGCGTGA
- Protein Sequence
- MPRTRVRTSKRGPSRVDLQRATLLVDQGVSEREAATRFHICHVTLNRYIKKIKNGIEEPNVGYSSHNKILSSEDELIFCEYIRHSADLYFGLSPSDVRSLAYEFCIRKNIKVPDQWHTTKMGSRDWFSNFMKRNNTLSIRVPEATSHARAINFNRTNVTKFFDNLARVMESGIFEAANIYNVDETGITTVQKPCKIVSTKGTKQVGAVTSSERGTLITICLAVNAIGNSIPPMFLFPRKRFKPFFMSKAPNGSIGEANGSGWMDADTFFIYIKHFAKHTRPSPQNKILLILDNHRSHLGLQIIDFCRENGIVLLSFPPHTSHKLQPLDRSVYGPLKVYLNSCMDAGMKNNPGQTMTIYDLPGLVAEALPKAATPTNILSGFKVTGIYPFNRDVFQDHEFAPSLPTDQPLNNEDNLINETSAEPMHPIAEVQTAESLLLTAFSQEPPSISKEPTPSTSKGPMPSISEASPPSRSKEPTPPSVSKAPTPSTSKESASSSSKELTPSTSKDELNNSKEILESIRPYPKAAKRAKVTNRRKGKTAILTETPEKIVLEEEEAARARKTNAKKAKKNISKKKQKESQFSSSDDDDTLCLYCLGPYSNDRHGGSPISKHESSAGECDSDEKNPDIIPQPVDTDDGSDYSRKKQHVSTIETSPSRSLLHQAGNSGYMGYCTLRNGMPMHELNAQSKMLPGPTQMIPAYNTSCTLPRQPPQHWQYGPVSHLPPGVYPMQYRGGPVAQQRLRSTQASIMDESRSKRSIIGKTSAATMREALYRIFEGGWSVKKAVQEFKIARTTLRRYKSKCERA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -