Kmac073375.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010002990.1:1636125-1637912[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-08 2.2e-06 30.2 0.0 1 39 18 57 18 62 0.89
Sequence Information
- Coding Sequence
- ATGGTAAGAGTGTATAAAAGGAAACTAGGTGCTAGAAGATATAAAGACTACAGTGAAGAGAACATTGAGCATGCACTAGCAAAGGTTACTGAAGATAGTCGGAGTCTACAGAGGGCTGCTCGAGAATACAACATACCTTATGGAAcgctaaataataaataccatGGTCGCCATATTAGAAAAAATGGGGGGCAAACCTGTTTTACAAATAGCGAAGACAAGGCCTTTCTTTCCGCAGCAAGTGTTTGTGGAGAATGGGGTTTTCCCTTAGACACAATTGATTTGAGACAGTTTGCGAAAAATTATTTGGATAGTCAAGGTCGCAACGTCGCCatgtttcaaaataatctaccaGGCAATGATTGGGTTTATTCTTTGCTTCAGCGACATAACGATGCAATTGTTAAAAAAGTGGCTGCAAATATTAAACGCTCTCGGGCTTCTGTTTCAAGACAAACTATAAtggattattttaacaatttacggGAGACATTGCAAGATATTCCTGCATCGAATATATTCAACTATGATGAAACAAACGTCCAGGATGATCCAGGaaataagaaaatgttatttcGACGTGGAACAAAATATCCTGAGAGAGTCTGCAATTTTACAAAAAGCGCTACATCCATTATGATGTGTGGGTCTGCATCGGGTGTGTTGTTGCCTccatatattatttacaaatcaGAGAGGATGTGGGTTCAATGGACCGAAAACGGCCCTAAGGGATATCCTTGTTGCAGTGGACGATGTTGTGCATCAGGGTCGAGGTATAGCCGTACACACCATGGGTGGATGGACGCTCAGACGTTCACGGACTGGTTCACATCATGCTTCTTACCACACGCTAAAGAATTGGAAGGTCGCAAAGTCCTGTTAGGTGACAACTTGTCATCTCATTTCACCAAAGATGTTCTTCGTTTATGCGAGGAAAATAACATCGCATTTGTATGTCTGCCCAAAAACTCGACACATCTAACACAACCTTTAGATGAGGGCTTTTTTAGAGCATTTAAAGTTTCTTGGAGGGCAACCTTATCAGCATGGAAACAGTCACACGTAACTTGCACTTCAATTGACAAAAAAGACTTTCCATATTTACTTTCTACTTCTTTGATGGAAATGGATAAAAAAGGAGAACGCGGCACCAATGCTATTAGGCATGATTTAGTTTCGTCTTTTAAAGCTACCGGAGTCGTGCCGTTCGATCCAGAGAGAGTATTACAAAAAATCCCTGGAAGCGACAATGTAGATGAAAATGCTGTTCAAGGAGTTTTAGTGGACTACCTACAGCAGCAAAGATTTAACGTTGCACCTACACGACGAAACATTAAAAGACAAAAGCTTGAGGTAGAGCCGGGTAAAAGCGTAACGGCTCCTAATGATGACTCAAATTCAGACGATGATTCAGAACCAGTATTAGAGGACCATTCTGATGACGAAATTATAGAAGAAATAGAAGAAGAGACGGAATATTTTTCAGtagaaaaggaaaatttaaaagaaggaGCGTTTTTGCTGGTTAAGGTTTTGGGGGGCAGTCGAAAAAAAACAGTGTATAGGTATATCTCAATTATTCAGAAGCTAATCGATGAAGGAGTGGAAGTGATGGGTATGAAATCCATTGGTGCtgcgaagaataaatttaaagcgGTGGAAGATGATCAATTTGTTATTGATAACTCTGACATTCTAGCAGTGCTTCCAAACCCTGAAATTAGAGATATCGACGGTGAAgctatatacatatttcaaaaagacatcgatgtaaaagaaatttag
- Protein Sequence
- MVRVYKRKLGARRYKDYSEENIEHALAKVTEDSRSLQRAAREYNIPYGTLNNKYHGRHIRKNGGQTCFTNSEDKAFLSAASVCGEWGFPLDTIDLRQFAKNYLDSQGRNVAMFQNNLPGNDWVYSLLQRHNDAIVKKVAANIKRSRASVSRQTIMDYFNNLRETLQDIPASNIFNYDETNVQDDPGNKKMLFRRGTKYPERVCNFTKSATSIMMCGSASGVLLPPYIIYKSERMWVQWTENGPKGYPCCSGRCCASGSRYSRTHHGWMDAQTFTDWFTSCFLPHAKELEGRKVLLGDNLSSHFTKDVLRLCEENNIAFVCLPKNSTHLTQPLDEGFFRAFKVSWRATLSAWKQSHVTCTSIDKKDFPYLLSTSLMEMDKKGERGTNAIRHDLVSSFKATGVVPFDPERVLQKIPGSDNVDENAVQGVLVDYLQQQRFNVAPTRRNIKRQKLEVEPGKSVTAPNDDSNSDDDSEPVLEDHSDDEIIEEIEEETEYFSVEKENLKEGAFLLVKVLGGSRKKTVYRYISIIQKLIDEGVEVMGMKSIGAAKNKFKAVEDDQFVIDNSDILAVLPNPEIRDIDGEAIYIFQKDIDVKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00847409; iTF_00846612; iTF_00847220; iTF_00846613; iTF_00846618; iTF_00847421; iTF_00846623; iTF_00846594; iTF_00846597; iTF_00846614; iTF_00846589; iTF_00846944;
- 90% Identity
- iTF_00847409; iTF_00846612; iTF_00847220; iTF_00846613; iTF_00846618; iTF_00847421; iTF_00846623; iTF_00846597; iTF_00846614;
- 80% Identity
- -