Kmac032366.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010000961.1:2692748-2693173[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-08 1.8e-06 30.5 0.0 2 40 16 54 15 58 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGAGTATACAAGCGTACATCTAATCGTATGGAGTGGAATGAAGACTCTCTTATAGCAGCTACGAAAGAAGTACGACAGAGATCGTTATCTTGTAACGCAGCCGCAATAACTTACGGAATACCGGAACCCACGTTGAGAAGATACATAAAAAGAGACGCTCAAAATAAAGAGTTCCCGGAGGGTGGGGGCCGCTTCAAAAACACCTTCAATGCTAAGCAGACGAAAGAATTTGTTAGCTACCTAACGGAATGTAATCAACGAGGTCTTGGGTTAACTTGCATGCAAGTTCGAAAACTTCCATATCAATATGTAGAAGCAAATCATATAGAACACAGGTTCAACAGAGAAACAAAAGCAGCCGGGACTGATCGGCTCAAAACTTTTAATACACGTAACAGCCTGAGTCTGAGGAATCCTTAA
- Protein Sequence
- MPRVYKRTSNRMEWNEDSLIAATKEVRQRSLSCNAAAITYGIPEPTLRRYIKRDAQNKEFPEGGGRFKNTFNAKQTKEFVSYLTECNQRGLGLTCMQVRKLPYQYVEANHIEHRFNRETKAAGTDRLKTFNTRNSLSLRNP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00847105;
- 90% Identity
- iTF_00847105; iTF_00846477; iTF_00847463; iTF_00846433; iTF_00846659; iTF_00846447; iTF_00846669; iTF_00846480;
- 80% Identity
- -