Kmac123383.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010005212.1:158317-169091[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-08 7.5e-07 31.7 0.0 1 36 15 49 15 52 0.94
Sequence Information
- Coding Sequence
- atgcctaaagtaaagaaaaattctAAATATCACAAATCGTACAGTGAAGATGCACTTCAAAAAGCTATTGAAGCTGTAAACAACGGCATGTCTAAGAGCAAGGCTGCAGACACTTTTAAAGTCCCACGACAGACAGTTCAGTACCGAATGGGAGATAAATTCAAGAAACCCACCCATGGACCTGTGCCGATTTTGACTACCAACGAAGAAGCGTTATTGGAACAGTGGATTTTAGAAAGTCACTCAAAAGGATTTCCGCGAAGACGAGATGATGTGCAAGCTGCAGTAAAAGTGTTTCTCGACAAAAATCATCGACCAAACCCCTTCAGAAATAATACCCCGGGAAAACATTGGTATGAAGCTTTCTTGAAAAGACATCCTTTGCTGGTTCATAGGACCCCTGAGGGTGTTACGCCATCCAGTGCTAACGTGTCGGAGAAGGATATCAGAAATTGGTTTTCCAAGATAAAAAATTAccttcaagaaaaaaattatgatgaaATTCTCCTTGATCCGTCTAGGATTTTTAATGGCGATGAAACCTGCTTCTTGCTCTGCCCTAAAGAAGACAAAGTGTTGGCCCCAAAAGGAACAAAAAATGCATACGAAGTAGATCAAGGTGTTGCAAAATCAAATTTGACGGTAATGTTTTCTTTTTCCGCATCAGGCTCAATGGTACCACCTATGATAATATTTCCCTATAAACGTCTTCCAGCAAATATTAGTGCTACTGTTCCTGCTAAATGGGGCATAGGTACAAGTGACAATGGGTGGATGAAATCTGAAGTCTTTTATGAGTATAtctcaaatatattttacaaatatctggtggaaaataatattacaagACCTGTTATCCTATTTGTCGATGGGCACAAAACCCATTTAACCTATGAAATAAGTACTTTATGTACCGAACTGGGTATAGTTCTTGTGGCATTGTATCCTAATGCCACAAGAATATTACAACCCGCGGATGTTGCCTGTTTCAAGCCTCTTAAATTACGATGGAAGCAGGCGGTATTAGAATGGAGAAGGCATAATCCCCTAGTCCAGTTAAACAAACAACATTTTGCTCCTATATTGGAACAAGCCATCAAAAGTTTGCAGAAATTCACTATTATAAATGGTTTTAAAGCTTGTGGTTTGTTTCCATTTAACCCCAGTGCCATTGACTTTACTAAATGTTTGGAAAAAGAACAAAGAGGCAGAGAACTAAATGAAAACCTTAATCCTAATGATAACagtttaaaatatcaagatttttgtgatGTTGTTGGCCAAGAAAAATTACAAGAATTAAAAGTTGATTGTTCCTCCAATGATGAATACTATACCGAAAAGGATATAGATGATATGCCCATACTAATAAATGATGAAGCAAATTACATTGATCCATCAGAAATTGAATATATTCCGagagctactgtggtataccctGCTCTTGAAAACCTTATGGATGAGGGATCATTCCAATCGTCAACAGAAATCTTGGATTTAGGCGTTACTGAAGAAGACAAAACTACATCAAATCTTAATAAAACACAAGAATCCAATTTTGAGCCAATTATGAccaataataaaactaatttcccAGCAAAATTCGGTTTAAAAGATTGCTTAATGTGGCCAAAAACACCTGAACGAAAGAATAAAAGACAGACCGAAAAATTACCATATGTTATATCATCTAGTGGGTGGAAACAATTGTGGGAAAAtaagcaaaaagaaaaagaagaaaaagaaaaagaaaaacaagaaagggatcgaaaaagaaaggaaaaaagaaGCGTCAGCAAAAATCCAAACCCAAAAGCCAAAACCTTAAATCCTGTAAATAATAATACCAAAGATATCCTAAAAGAGAAAAAGACTGTTAAGAGTGTTAAGCCAAAGCATGTAAAAAACATAAGTTTACCTGAAAATAGCGGAAATAgtaataccaataataatttaGAATCAGATAGTGATTTGGGTTTTCTTGAAGAGATCCAGAACAAGGTCACCAATACCAGTgttcaaataatagaaaaagagCCAAAGATTAAAAAACTCCTAATACTACCcagtaaaaaatctgaaaatgaaaACACCGAAAAGATCATGCCAGAAGAAAAAGGaccaaaacatACGTGTTTACATTTAGAAGATATTCTGGTAGACGTGTTGTTCCAGTTGTTTGCTATTATACGGACAACAAACCATAATGATCTGGAAGCTATACGTTTGATAGGACGGAGTATGGACCGAAGTTCTTGTAAAAATAACATGACTGGACAAGACTATCAGCAGCATGTAGTTCAGGTCGTCATACTTATCATTCCAGGAGCAGTTGGTGATGATTTTGTCTGCACAGAACTACTGTTGTATTTAGAGAAATGTTGA
- Protein Sequence
- MPKVKKNSKYHKSYSEDALQKAIEAVNNGMSKSKAADTFKVPRQTVQYRMGDKFKKPTHGPVPILTTNEEALLEQWILESHSKGFPRRRDDVQAAVKVFLDKNHRPNPFRNNTPGKHWYEAFLKRHPLLVHRTPEGVTPSSANVSEKDIRNWFSKIKNYLQEKNYDEILLDPSRIFNGDETCFLLCPKEDKVLAPKGTKNAYEVDQGVAKSNLTVMFSFSASGSMVPPMIIFPYKRLPANISATVPAKWGIGTSDNGWMKSEVFYEYISNIFYKYLVENNITRPVILFVDGHKTHLTYEISTLCTELGIVLVALYPNATRILQPADVACFKPLKLRWKQAVLEWRRHNPLVQLNKQHFAPILEQAIKSLQKFTIINGFKACGLFPFNPSAIDFTKCLEKEQRGRELNENLNPNDNSLKYQDFCDVVGQEKLQELKVDCSSNDEYYTEKDIDDMPILINDEANYIDPSEIEYIPRATVVYPALENLMDEGSFQSSTEILDLGVTEEDKTTSNLNKTQESNFEPIMTNNKTNFPAKFGLKDCLMWPKTPERKNKRQTEKLPYVISSSGWKQLWENKQKEKEEKEKEKQERDRKRKEKRSVSKNPNPKAKTLNPVNNNTKDILKEKKTVKSVKPKHVKNISLPENSGNSNTNNNLESDSDLGFLEEIQNKVTNTSVQIIEKEPKIKKLLILPSKKSENENTEKIMPEEKGPKHTCLHLEDILVDVLFQLFAIIRTTNHNDLEAIRLIGRSMDRSSCKNNMTGQDYQQHVVQVVILIIPGAVGDDFVCTELLLYLEKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00847228; iTF_00846792; iTF_00846609; iTF_00846270; iTF_00847394; iTF_00846600; iTF_00846583; iTF_00846610; iTF_00846580;
- 90% Identity
- iTF_00847228;
- 80% Identity
- -