Basic Information

Insect: Kuschelorhynchus macadamiae
Gene Symbol: -
Assembly: GCA_030620095.1
Location: JAUTXW010005318.1:1201742-1204414[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.8e-09 6.2e-07 31.9 0.1 4 41 18 55 15 57 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.8e-09	6.2e-07	31.9	0.1	4	41	18	55	15	57	0.92

Sequence Information

Coding Sequence: ATGCCACGTGTCTACATTAGAAAAACGAATAGGCAATCATGGTCCTCAGCTTCGATGGAAAGGGCTATAGAAGCTGTTGCGAATAATGAAATGGGATGGCTTAGGGCATCTAAAGTGTATGGTATCCCTCAAGCGACACTTAGAAGGCatgctcaaaacaaaaataagtctATAAAAACAGGAGAAAAACGGCTTGGGCGGTTTAAATCAattttctcggagaatgtagaacgTGAGTTAGTTGAACACCTGAAGTTAATGGAGtctagatttttcgggttaagaAGAAAGGAGGTTTTAGAGCTAGCTTATCAATTAGCTGTTAAAAATGGGATTCAGCACACCTTTAATGCCGAAAAGAAGAGCGCTGGCAAAGATTGGTTACGAGAGTTTAAAAGAAGAAATCCTTTTAATAGACCACAAGTTGCGCAGTTTTTCACTCTACTGAAAAACATGTTCGGAAAATCGGTCGGTGTTTTACATGTGGACAATGGTACCGAATATACCAACCctgattttaaaaactacttgttgcaaGAAGGTATAACCCTGGAACTGACTGCCCCCTACACCCCGGAACAAAACGCGCGGGCAGAACGCGGTAATAGAACAATTGTTGAAAGTGCTCGTTCAATGATGTGTCAAAACGACGTGGCAAAATATTTGTGGGCAGAGGCCGTAAATACGgcgatatatattttaaatcgaacGCCAACCAAACAGACAATCGGGTCGACGCCGTACGAAATCTGGACGAATCAGAAGCCATTTTTGGGACACCTAAAAATATTCGGTTGTGATGCGTTCGCGCATATACCGGACATTAAACGCACAAAACTTGACCAAAAAAGTAGAAAGCTGATTTTTGTCGGGTACGATAACAACTCCACGAACTATAGACTTTTCGATCCTGTGACGAGTAAAATCACTATTTCTCGAAACGTAATTTTTCACGAGAATTTGGAGAAATCGGGTAGcggagctggcaacgccgcagaCAATCTGTCAGCGAGCAACCAATCCGCGACCATGCGTTTCGACGAAGACGATTGTTGTTTTGATAATGACAGCAACGAAGTAAATAATGAAATTCAGCCCGAAAATAATGAATATGATCCAGACGATGAGCAACCAGAACCAGAGGTACCAGTACTGAGGCCTTCTAGAAGTATCAGAGTACCAACGAAATACACGGactatgaattaaatttttctgaAACAAATGTACCCCAAACTTACGACGAAGCTCTTGCCTCCCCAGATGTTTCGCAATGGAAAGGGGCGATAAACGAAGAGCTGAAGGCGCTAGATAAAAATCAAACATGGTATCTTGTGCCTAGACCTAAAAACGTGAAAGTTTTACAAACGAAGTGGGtgtttagaattaaaagaaaCACAGACAAAGTTTCTCGTTACAAAGCTCGATTATGTGTCATGGGATGCTCGCAAACAGCCGGAAGTGACTATCACGAAATATTTGCGCCCTCAACTCGTTACGATTCTATACGTGTGTTGTTAGTTGTCGCAGCGCAAAACTGTTATGAATTAATGCAGTTTgatataaaaactgcatttttatatggTGAATTGGATGAAGACGTGTACATGTATATACCCGAAGGCTTGAAACAAGGTGAAAGTTATTCTGATGTTGTCTGCAAACTCAACAAATCTCTGTATGGGCTGAAACAGGCTCCACGCTGCTGGAACAGAAGGTTTCATCAGTTTTTAGATCAATATGGTTTCAAAAGATGTGAATCAGATAGGTGTGTATATACTGGATTTgtacataaaattaaagttattctAGTTATATTTGTTGATGATAGACTGGTTATTTCTGAGAGtaaagaggtaattttacaaGTTCTGAAGCAGCTCAAATCAGAATTTGATGTTACTATATGTGAACTCTCATATTATGTTGGTGTAGAAATACAAAGAAATCCATTGACAGGCTCGATATTTATTAATCAAAAGAGCTACATTAAACAGATAATTTCAAAATTCAGATTGGAAAATGCAAATTCCTGTTCCACTCCAGAAGATCCATCCACCGATCTTACTGCTCAGGCAGAATATGTTTTATCTGAGGGTGAAGTGCCCTACCGACAGGCTATTGGATTCTTGCTATTTTTGGCGACTGTGACACGTCCAGATATTTCACACGCAGTGGGAGTTCTCAGTAGGTTTGTCAACAGCCGCACAAAAGCACATTGGAGAGGAATTAAGCGTGTTATACGATATTTAATTGGAACCGCAGATTATGGAATATTATATCTACAACAAGATGCTTCTGACAGTGCTCTACATGGTTTTTGCGACTCGGATTATGCAGGCGATCGTGCTACACGAAAATTGACAAGTGGATATTTGTTCAAACTATCAGGAGGACCTGTTACCTGGTCAAGCAGAAAACAAAGCACTGTTTCTCTATCTACAACTGAGGCGGAGTATGTGGCTGCTTCTAGTGCTGTAAAAGAAAGTTTGTGGCTGCAACAACTTCTCAGAGACATTCATGAAAAAGACATGTTAGTGCTACCTATGACTTTATATATAGACAATCAAAGTGCGATCAAACTTGTGAAAAACTCTGAGTTCCACCAGAGGTCAAAACATATTGACGTGAAATTTCACTTTATTCGAGAGAAATTTGATAGTGGTCTTGCCTAA
Protein Sequence: MPRVYIRKTNRQSWSSASMERAIEAVANNEMGWLRASKVYGIPQATLRRHAQNKNKSIKTGEKRLGRFKSIFSENVERELVEHLKLMESRFFGLRRKEVLELAYQLAVKNGIQHTFNAEKKSAGKDWLREFKRRNPFNRPQVAQFFTLLKNMFGKSVGVLHVDNGTEYTNPDFKNYLLQEGITLELTAPYTPEQNARAERGNRTIVESARSMMCQNDVAKYLWAEAVNTAIYILNRTPTKQTIGSTPYEIWTNQKPFLGHLKIFGCDAFAHIPDIKRTKLDQKSRKLIFVGYDNNSTNYRLFDPVTSKITISRNVIFHENLEKSGSGAGNAADNLSASNQSATMRFDEDDCCFDNDSNEVNNEIQPENNEYDPDDEQPEPEVPVLRPSRSIRVPTKYTDYELNFSETNVPQTYDEALASPDVSQWKGAINEELKALDKNQTWYLVPRPKNVKVLQTKWVFRIKRNTDKVSRYKARLCVMGCSQTAGSDYHEIFAPSTRYDSIRVLLVVAAQNCYELMQFDIKTAFLYGELDEDVYMYIPEGLKQGESYSDVVCKLNKSLYGLKQAPRCWNRRFHQFLDQYGFKRCESDRCVYTGFVHKIKVILVIFVDDRLVISESKEVILQVLKQLKSEFDVTICELSYYVGVEIQRNPLTGSIFINQKSYIKQIISKFRLENANSCSTPEDPSTDLTAQAEYVLSEGEVPYRQAIGFLLFLATVTRPDISHAVGVLSRFVNSRTKAHWRGIKRVIRYLIGTADYGILYLQQDASDSALHGFCDSDYAGDRATRKLTSGYLFKLSGGPVTWSSRKQSTVSLSTTEAEYVAASSAVKESLWLQQLLRDIHEKDMLVLPMTLYIDNQSAIKLVKNSEFHQRSKHIDVKFHFIREKFDSGLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -