Kmac067337.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Kuschelorhynchus macadamiae
Gene Symbol
RTase
Assembly
GCA_030620095.1
Location
JAUTXW010002733.1:270345-295692[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.6e-09 6e-07 32.0 0.0 1 43 679 722 679 724 0.91

Sequence Information

Coding Sequence
ATGTCTGAAAGATATGAAgatcaaacattattaaaattgctAAGGCAACAGAATCAATCAGTTTTTTGTCAGGATGAAGATCTTAAAGTATTAagtataaaacctttaaaaaataagcccAAAATATTCCAGAGTATTATTCAGTTGAATCCTAGCATTTATAAGAAGGCCATGGACAGTGGTTTTTTGTTTGTGGGCTATGATCACCGCAAAGTCTTTGATGGTCTTGAGGTTAAGAGATGCTTCCGGTGCTGTGGTTATCATCATATGGCAAGTGCTTGTGATAATGATATATGTTGTCCTAGATGTGCTAAAAATCATGAAGTAAAAGAGTGCAAGGAAACATCTTTAACTTGCGTTACTGAGACATGGTTAGACCCAGAATACCCAGATCAATTGGTAGATGTTCCAGGTTATCAGCTTTTTCGTGCAGATAGGCCAACCAGAGGAGGTGGAGTTTGTATATATGTGTCTGCATCCGTAAAGTGTTCAAAAATTGATGTGTCAGCAATGTGTGATGGAATATCCCCAGTTGAACAACTCTGGATTgagATTGGATAtgaaattcctaatcatttaaGGGATGTACACTCTATAAGTGATCACTTCGCTGGCATAAGCCATGCAGCTCACCCGGTGAATGATGTACTGGTTGAGTCTCTGAGGTCCACAAGATTGCATGACGAGAatacttttgactttaaaaatgtatcagaatACGATGTATATCAGGCTTTTTCTAGGATAAAGTCGAAAAGTATGGGTGTTGATGGTTTGAGCTATAATATGATATTGTTCAGTATTAATCATATAGTTCCGATGGTCACTAACTTGTTTAACTTGTGTCTGCACACTGGAAATTTTCCTACCTTGTGGAAAAcctccattattaaaccactgccAAAGAACCCTAAGATAGAAACCCTTGCAGAGTTAAGACCTATCTCTCTCCTTccaatttttgctaaaatgttgGAGTTACTCATTTGTGATATGATTAAGGAATATTTGTATGATAAGGATATTCTTCCTGGAGTTCAGTCTGGCTTTCGCAAGGGTCATGATACTGCATCAGCCCTTACTAATGTTACTaccaatatttctagaaatatggATGATGGCAAAGTATCCTGTTTGGTTTTACTTGATTATAGCAAGGCGTTTGACCTGATTAATCACCAAATGCTAATTGCcaagttttcattttttggctTCTCGGAACAAGTGTGTTTATGGTTTTCTAACTATCTTTCTTCTCGACTACAGTTGGTGGAGCTGGATGGTGCAAGATCTGAGGCTGTGATGACAGGCATGGGTGTGCCGCAGGGAAGTGTACTGGGTCCACTCTTGTTTAATATGTACACGTCGGACCTGCCCAATCAGGTTAGGTCTTGCAAGGTCCAACTCTATGCTGATGATACCCAGCTCTTAGCTGGTTTTGCCCCCGAGGAGGCCAGTTCGGCTATGCAACAGGTCAATGAGGATTTGGAGAGAGTATTTATTTGGTCTGTTGATCATGGTTTAGTCTTAAATGCGAAGAAAAGTAAATTGGGGTCATCTGCACTTAGGAGTAAATTTTACCTTTGTAACTTTGTAGATTTGCATATTGATGGGTCCTTGCTGCCACCTGTTGAGTCTGCAAGAAATCTCGGAGTCACTtttgatAAACTAGAGCAAAGAAATAAAGATCTCCAGAAGGAGATAGAGCAGCACAGAGTCTCGGACAGCAACGCTAAAAACGAGTTGAGTGAGCTGACAAAACTAAATGGGAGCATGCTAATTACCATTGAAACACTAGAAAAGAGCAACGAATGCCATATAAATGACATCAAAAGGCTAAATAAGATGATACTTACACTTGACGGAAGTGTTCCCTCAGAAGCATCACGGTTGACAGTAAATAAACAAACTCAAACTTCATTGATAAATTCACTTAAAAATGAGAGTTCTGGAAGCGCAACTGTTCGTAAGAGACGCCAACTTTTGATCATCGGCAATGAAATGGCTAGAGGAAccaaattaaGGGGTAATTATACGGATGAACAATTGGGTACTGCTATAGAAAAAGTCAGAAATGGAGGAATTTCTAAGCGAGAAGCTGAGAGAAGATATGGAGTGCCGGCGCGCACCATAGACAGGAGAATAAAATCTGGAAAAGTTACAAAAGGTCCTCTTGGCCCAGGaggtgTTTTGGAACATGAGAACGAAAGAAGGCTGGCAACTCATATCAAAAAACTCTGCGCTGCTGGATTTGCGCCGGATCGAAAAACAGTTCAAACATTAGCatataattttgcagaaaagctcAAAGTAAAACACACATTCTCAATACAAAATAGGAAAGCTAGAAAGCAGTGGCTTAGATCTTTCTTGGAAAGAAATCCGGACCTATCCATTCGACAGTCGGAAGGACTATCGTTAGCAAGAGCCCAAGGAATGACTAGGTCAGAAGTTGCTAACTTTCATCTATTAACCAacgttttaaatgaaaataacttcccatccaatattttcaacatggATGAAGCAGGAATCCAAATCATAAATAAGCCTTCCAAGGTTATTGCTCCCAAAGGAGCAAAGGCTGTGCATACTTTGACATCTCGCGAGCGAGGAGAAAATGTCACGGTTATCGGCTGTTGCAATGCTGAAGGAGTGTTTCTTCCACCGGTCCTCATTATGAAAGCAGTTAACAAGAAATCAAAATTTTCCGATGGTTTGCCAGCTGGCTCCTCTGTTTTCATGAATAAAAAGTCGTCCTTTATAAACtcagacaattttttaaaatggcttACTGAACATTTTATCCCAAGAAAGCCCGCAGGGAAAACTGTATTGATTATGGACGGGCATTCATCACATTGCTCGGATGTTGAAATGCTAGAAATTGCAgaccaaaatgaaattattttattgtgcCTACCTAGCCACTGCACCCAGGCCATGCAACCCTTAGACCGAAGTTTCTTCGGCCCTCTTAAGTGCTATTGGAATCAAGAAGCCAGAACATGGATGCTCAATCATCCCGACAGAAATCTAACCAGGTATCAAGTGGGAAAAGTTCTTGGAAAGGCATGGATCCGTGCTGCTACTGCGTCAAATGCAATATCGGGGTTTCAAGTCACTGGCATATGCCCCCTTGACCAAAATGCAATACCAGAACATTTTTATGCGATCTCAGATTTGTCACAACAGAATACAAATAATGATAATGCAAATGGTCCCGTTCAAGAAGAAACAGTTGCCTTAATTCATACACCTAAGAAATCAAGATCAGCAGATGGAGAAAACACTTACGAACCCCAACCAAGTACCTCTGAATACCAATCAGATGACGATGACATAACACCAAGtaaatttttacaagatatgaGACCAATTCCAAAAATTCCTGTAGcactaaataaaagaaaactgtCAGCTACCGTACTTACTTCACCTGAGAACATTAAGATAAAGAAAAGTAAACCCTTGcaggaaaaaaaagaaaaccaaaagaaatcaaatttaaaaaaaaatcagaaaaaggagaaagaacttaaaaaaaccaaagctacaaaaaatataaaagagtcAGATGATGAGCCACTCCATATAACAATGCGCAGTGCTACTGTGTAG
Protein Sequence
MSERYEDQTLLKLLRQQNQSVFCQDEDLKVLSIKPLKNKPKIFQSIIQLNPSIYKKAMDSGFLFVGYDHRKVFDGLEVKRCFRCCGYHHMASACDNDICCPRCAKNHEVKECKETSLTCVTETWLDPEYPDQLVDVPGYQLFRADRPTRGGGVCIYVSASVKCSKIDVSAMCDGISPVEQLWIEIGYEIPNHLRDVHSISDHFAGISHAAHPVNDVLVESLRSTRLHDENTFDFKNVSEYDVYQAFSRIKSKSMGVDGLSYNMILFSINHIVPMVTNLFNLCLHTGNFPTLWKTSIIKPLPKNPKIETLAELRPISLLPIFAKMLELLICDMIKEYLYDKDILPGVQSGFRKGHDTASALTNVTTNISRNMDDGKVSCLVLLDYSKAFDLINHQMLIAKFSFFGFSEQVCLWFSNYLSSRLQLVELDGARSEAVMTGMGVPQGSVLGPLLFNMYTSDLPNQVRSCKVQLYADDTQLLAGFAPEEASSAMQQVNEDLERVFIWSVDHGLVLNAKKSKLGSSALRSKFYLCNFVDLHIDGSLLPPVESARNLGVTFDKLEQRNKDLQKEIEQHRVSDSNAKNELSELTKLNGSMLITIETLEKSNECHINDIKRLNKMILTLDGSVPSEASRLTVNKQTQTSLINSLKNESSGSATVRKRRQLLIIGNEMARGTKLRGNYTDEQLGTAIEKVRNGGISKREAERRYGVPARTIDRRIKSGKVTKGPLGPGGVLEHENERRLATHIKKLCAAGFAPDRKTVQTLAYNFAEKLKVKHTFSIQNRKARKQWLRSFLERNPDLSIRQSEGLSLARAQGMTRSEVANFHLLTNVLNENNFPSNIFNMDEAGIQIINKPSKVIAPKGAKAVHTLTSRERGENVTVIGCCNAEGVFLPPVLIMKAVNKKSKFSDGLPAGSSVFMNKKSSFINSDNFLKWLTEHFIPRKPAGKTVLIMDGHSSHCSDVEMLEIADQNEIILLCLPSHCTQAMQPLDRSFFGPLKCYWNQEARTWMLNHPDRNLTRYQVGKVLGKAWIRAATASNAISGFQVTGICPLDQNAIPEHFYAISDLSQQNTNNDNANGPVQEETVALIHTPKKSRSADGENTYEPQPSTSEYQSDDDDITPSKFLQDMRPIPKIPVALNKRKLSATVLTSPENIKIKKSKPLQEKKENQKKSNLKKNQKKEKELKKTKATKNIKESDDEPLHITMRSATV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-