Basic Information

Insect: Kuschelorhynchus macadamiae
Gene Symbol: -
Assembly: GCA_030620095.1
Location: JAUTXW010001334.1:280927-282885[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5e-09 3.5e-07 32.7 0.0 1 44 17 61 17 62 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5e-09	3.5e-07	32.7	0.0	1	44	17	61	17	62	0.89

Sequence Information

Coding Sequence: atgccaacaaaatataatagaaaagggACGGTGCAAAGAGGAAACTGGACTGAAGAAGATCTGGTTAAGGCTGCAGAAGCGGTCAGAAACGGTGTAATGGGAGTAAGGGAAGCGTGTCGTACTTTTAATGATATTCCTCCTCCAACATTTCGGAGACGATTTAAAAAGTCCGATTTTACTAAAAGAACTCTCGGGACACCCTCTGTTCTTGGCAGCCAGaatgaattgaaaattaagtttcatatacaaaaattacaaaaacatggGTTTGCACCGACGCGTGAATGTGTCAGAGCAGTGGCGTTTTACTTAGCAGAACAGCTTAAGATTAAACACAGGTTTAATAAAGACAAGAAGCTTGCCGGCTATGActggttaaatatgtttttactgcgGAACCCTGATCTAAGTGTTAGAAAGGCTGAGGGTGTTTCACTAACTCGCTGCAAAGGAATGAATAAAACAGAAATCTCGACGTACTTTAATCTATTGGAAACAACATTAATGGAAGCTGGTTTAATAAACAAGCCTGGTCACTTATTTAATATGGATGAAACTGTGCTTCAATTAAACAATAAGCCGGGTTACGTTATTGCACAGAGAGGCTCAAAAAATGTTGCGGCAATTACTTCATCTGAAAAGGGAGAAACCATAACAGTGATTTCGTGCTGTAACGCAGAAGGATTTTGTATACCACCTGCCTGTATATtcaaaggaaaaaacaaaaaagccgaATTCGAAGATGGTATGCCACCGGGCTCAGTTGTATATATGAATGAAAAATCAGCTTACATTAACACAGATTTGATGTTTACCTGGTTAAAAGATCAGTTTATTCCACGAAAACCAGAAGGAAAGGTTTTACTTCTACTAGATGGCCATGCGAGTCATTGCAATTCTCCAGAAATGCTTGAATATGCCGATGATCATGGTGTTATTCTCTTTTGCTTACCTGGTCATACAACTCAGTTTCTCCAACCGTTAGACAGGTGTTTCTTTAAGAGCcttaaagcatattttaataaaGCTTGTAATACATTTGTAAAAGCAAACCCTACCAGAAAAATTTCTCGGTTACAATTTGGACAACTGTTGTCGGAGGCATGGTCGAAATCAGCGACGGTTGATAATGCTGTGTCGGCTTTTAAATCAACTGGAATTTGTCCTTTTAATCCAGGAGCTATCCCGGAATACGCATATTTGGGGTCCGAAGAGGAAGAATTTAATAATACAGttaacGCGATGGAACCTAATAAAACTACTGAAACATCAGATCAAGAAATTCCATCTACCTCAGCCTCAGAACCAGAACCTCAACCAGAGATGCCAAATACCGATCAAGACAATCCCGATAACGCCAATCTCGATGAAGACAATCCCGGAACACTCCTTAATAAATTCTCTCCTGTACCCAGCACCTCTTCAGCTGCCATACAAAAAGTTCGAGGAAGGGCAAAGCAAGTAGCAGCTGTATTAACGTGCCAAGGTCACATCGAAAAAAGAAAATGCGCTGTTGAACGCAAGAAAGAAGaagaacagaaaaaagaattGAAGAGAAAGACCTTAACGATGAAAaagaataaaggaaaaaaacaaagaatgaaAGTGGAAGAGTCCTCCACAGATGATGATATGTCAGATGAGTTGGTGACTCAGTCTGATGACAGTCCAGAAGAAGAAGACGAGACAGAGGGCCTTGGTTGTGGTGAACACTATAACGTTACCACAAAAAACGATGATTGGATCAAATGCTTACACTGCCAAAGGTGGTTCCACGAAAGTTGTTCGAAGTTTATAAACCTCTGTGACCTGTGTGgtaaaatattgtccaaaaaaaggGGTTATATCATAAAAGTTTCTTCGGGCCATCTCACCCTACATGCTTGGGCCAACTAA
Protein Sequence: MPTKYNRKGTVQRGNWTEEDLVKAAEAVRNGVMGVREACRTFNDIPPPTFRRRFKKSDFTKRTLGTPSVLGSQNELKIKFHIQKLQKHGFAPTRECVRAVAFYLAEQLKIKHRFNKDKKLAGYDWLNMFLLRNPDLSVRKAEGVSLTRCKGMNKTEISTYFNLLETTLMEAGLINKPGHLFNMDETVLQLNNKPGYVIAQRGSKNVAAITSSEKGETITVISCCNAEGFCIPPACIFKGKNKKAEFEDGMPPGSVVYMNEKSAYINTDLMFTWLKDQFIPRKPEGKVLLLLDGHASHCNSPEMLEYADDHGVILFCLPGHTTQFLQPLDRCFFKSLKAYFNKACNTFVKANPTRKISRLQFGQLLSEAWSKSATVDNAVSAFKSTGICPFNPGAIPEYAYLGSEEEEFNNTVNAMEPNKTTETSDQEIPSTSASEPEPQPEMPNTDQDNPDNANLDEDNPGTLLNKFSPVPSTSSAAIQKVRGRAKQVAAVLTCQGHIEKRKCAVERKKEEEQKKELKRKTLTMKKNKGKKQRMKVEESSTDDDMSDELVTQSDDSPEEEDETEGLGCGEHYNVTTKNDDWIKCLHCQRWFHESCSKFINLCDLCGKILSKKRGYIIKVSSGHLTLHAWAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00846470; iTF_00846475; iTF_00846454; iTF_00846455; iTF_00846457; iTF_00846459; iTF_00846429; iTF_00846461; iTF_00846462; iTF_00846878; iTF_00846463; iTF_00846464; iTF_00846436; iTF_00846444; iTF_00846420; iTF_00846486; iTF_00846460; iTF_00847474; iTF_00846483; iTF_00846451;
90% Identity: iTF_00846455; iTF_00846457; iTF_00846459; iTF_00846461; iTF_00846425; iTF_00846451; iTF_00846486; iTF_00846462; iTF_00846403; iTF_00846470; iTF_00846475; iTF_00846454; iTF_00846429; iTF_00846878; iTF_00846463; iTF_00846464; iTF_00846436; iTF_00846473; iTF_00846444; iTF_00846483; iTF_00846460;
80% Identity: -