Kmac059222.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010002201.1:143072-144862[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-09 2.5e-07 33.2 0.1 1 39 11 48 11 54 0.92
Sequence Information
- Coding Sequence
- ATGGAAGCTTCAAAAAAAAGTGGGCGCTGGTCGGAGGAACAGCTTCAGAGAGCGATGGAGGCAGTGCACGAAGGGACTTCGGTAAGAACTGCAAGTCTTACATACGGGATTCCTAGGAGGACTCTTCGAAATCACATTTCTTCTGGGGTCGTGAATAAAAGATTAGGGCGCCCATCTGTCCTCACAGTTGATCAAGAAAATGACCTCTGTCAAAGAATATTTAGATTGTCAGATGTTGGCATGCCTTTGACGTCCAAACTTCTAAGAAGATCAGTATTTACATATTGTGACGAACTGAGAATTTCCCATCCATTTTCCGAAACAAAAGGAATGGCAGGCAGAAAATGGTTTCGTCTTTTTTTGAAGCGACATCCCGAGGTGGCAAGGCGAAAGGCACAACACATGAATGCTGCAAGGGCAGCGAAACTTAATAGATTTATTGTAAATGACCATTTCGAAAAACTTCGGCTTGTTCTTGAAGAAATGGGAATTATGGGTAAACCTCATCTTATTTACAACATGGATGAAAAAGGATGCAGGCTTACTTTGCATAAGCAACCGTATGTACTTACGAAAAAGGGTTCATCAAATGTCCATATAATTGCTGAAGAACATGCTGAAAACGTTACGATTGTAGCGTGCGGAAATGCAATAGGGCAGGTCATCCCACCAATGATATTAATGAAAGGTAAAAGGGAAAAACAAGAATGGTCAGAAAACTTACCTCCTGGTTCAACTCTTAAGATGACTGAAAAAGGTAGCATGACAACGACCACTTTTGTAAAATGGTTGGAGCACTTTTCGAtctttaaaccaaaagaaaaagtgTTGTTAATTTTTGACGGAGCATCTTCTCACTTAGATTATTCAATCGTAGAGGCAGCGGAAAAACACGACGTTGTACTTTATTGTCTTCCCAGTAACACAATGCATCAGTTACAGCCGATGGATAAATCTGTATTTGGTCCTTTTGAGAGTTACTGGGATGATGAAGTTATGCTCTTTTGGACCAACAAACCAAATCATAGAATAACAAAACTCAACTTTGCAACTATATTTAGCAAAGTATGGCCACGAGCTGCAACACCAGCAAATGTATCATCTGGGTTCCGCGCAACTGGGATCTACCCGTTCGACCCCAATATATTACCTGATGACGTTTTTGCTCCATCTGAACTTACAAATAGGCGAAGAGTTGAagtcgaaactgaaaaagatcaAAATTCTAGTAAcacaaaaagtttgttaaaagataaaatcgaagaacccaaaaataaaGGACACGACGATCGTCGGCACATAAATAAGAAAACGAGTAATGGGACCAAACTTAGACAAGGCGAAGACCAGGCGGGACCAAGTGGAATTCAAAAAAAGAGAACCAAAAGAAATTGTACGTCCAGCTCCGACTCTTCTTCAGATAGTGACAGTGACTATTCAGTAAGGGATTCAACTTCTGATGAGAGTTTTAGTAATCTACATGTGGCTAAAGAAAATTCGCCACTTTTGAAGGCAGAACCAGGActtaactttaaaaacattttacctaCACCAGAGCTTGAAGTAAAGAAAATTACGCCCAGAAAGAAATCAATAAATTATAGAGCCCAGCGGGTGACGAAAGATCTTTTCaaagaaaaagtagaaaattatttaaaagactgCACCAAACCGCAACAACCCAAGAAAAAGAAAGTTATTGAGGCATGGTATTGTCATGAATGTAAAGAAGACAGGGTTGCTGACATGAGATTGTGCAATATGTGTGTAAGATATACGAAGAATACGTAG
- Protein Sequence
- MEASKKSGRWSEEQLQRAMEAVHEGTSVRTASLTYGIPRRTLRNHISSGVVNKRLGRPSVLTVDQENDLCQRIFRLSDVGMPLTSKLLRRSVFTYCDELRISHPFSETKGMAGRKWFRLFLKRHPEVARRKAQHMNAARAAKLNRFIVNDHFEKLRLVLEEMGIMGKPHLIYNMDEKGCRLTLHKQPYVLTKKGSSNVHIIAEEHAENVTIVACGNAIGQVIPPMILMKGKREKQEWSENLPPGSTLKMTEKGSMTTTTFVKWLEHFSIFKPKEKVLLIFDGASSHLDYSIVEAAEKHDVVLYCLPSNTMHQLQPMDKSVFGPFESYWDDEVMLFWTNKPNHRITKLNFATIFSKVWPRAATPANVSSGFRATGIYPFDPNILPDDVFAPSELTNRRRVEVETEKDQNSSNTKSLLKDKIEEPKNKGHDDRRHINKKTSNGTKLRQGEDQAGPSGIQKKRTKRNCTSSSDSSSDSDSDYSVRDSTSDESFSNLHVAKENSPLLKAEPGLNFKNILPTPELEVKKITPRKKSINYRAQRVTKDLFKEKVENYLKDCTKPQQPKKKKVIEAWYCHECKEDRVADMRLCNMCVRYTKNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00846387;
- 90% Identity
- iTF_00846405; iTF_00846407; iTF_00846387; iTF_00846717; iTF_00846402; iTF_00846372; iTF_00846362; iTF_00846107;
- 80% Identity
- -