Kmac006756.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010000180.1:156225-156668[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-09 7.9e-08 34.8 0.0 3 39 13 49 11 53 0.94
Sequence Information
- Coding Sequence
- ATGCCAAGTCAAGGTAGGAGGAAAAACTGGGATGTTGAAAATATGGTTGCAGCCATAAAAGCCTGTAGAAGTAAAACAATGGGTTACAAAAAAAGTGCTAAAACACACGGAGTACCACAAACGACGTTGGAAAGGTTTGTTAAAATGAGCGGATCTCCCGAAGTTGTAGTCCAAACCAAACTCGACAAGAAGCCAGTGTTTTCGCCAGAAATGGAAAATCATCTTTCCACACACTGCCTGCAAATGGAACAAAAATATTTCGGAATAACCAAaagagatatttgcaaaataGCATTTTCCCTGtgcatagaaaataaaataaagaatcctTTTAACACGGTAAATGAGTGTACAGGCTCTAAGTGGTTTAAAGGTTTTCTTCGGCGTCATCCAGAGCTCTCCCTAAGGACCCCACAAGGAATTTCATACGCCAGAATAAAATGA
- Protein Sequence
- MPSQGRRKNWDVENMVAAIKACRSKTMGYKKSAKTHGVPQTTLERFVKMSGSPEVVVQTKLDKKPVFSPEMENHLSTHCLQMEQKYFGITKRDICKIAFSLCIENKIKNPFNTVNECTGSKWFKGFLRRHPELSLRTPQGISYARIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00846275; iTF_00846789; iTF_00846555; iTF_00846662; iTF_00846501; iTF_00846344;
- 90% Identity
- iTF_00846662;
- 80% Identity
- -