Kmac117658.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010005022.1:487713-489473[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-10 5.5e-08 35.3 0.1 1 39 13 51 13 56 0.90
Sequence Information
- Coding Sequence
- ATGATGCCTGGTACCAACCAAGAGCGCCAAATGTGGTCAGAGGACAATATGCAAGAGGCCATTGACGCAATTAAGTCCAAATCTATGGGATACAAGCTTGCAGCGAAAACTTACAGTGTGCCTAGAAGTACCCTTAAAAGACGAGtgttagagaaaaataaaatatccaaaggCAATCGAAAAGGTTTTTTAGGGGGCCATCAGTCAGTTTTTTCTGAAGAAGTGGAACTGAGCCTCGTCAGTCATTTATTGGAAATGTCCGATCGACTTTTTGGTCTAACCTCATCTGACATAAGACGATTAGCTTTCCAACTGGCTGAGtctttaaaattaaagcacacatttagcagaaaaaataagatgacaGGTTGGCAGTGGTTAAAGGATTTTTTGAAAAGACATTCGCAACTCAGTTTAAGAACACCAGAGGCAACATCCATTGCACGTGCCTCAGCTTTCAACAAAGTTCAGATCGAGAAATATTTCAATACCTTGTCAGCTCTTATACAGAGATTCCAGTTTCCTCCGGAGTCTATCTATAATATGGACGAGTCTGGTTTCACAACAGTACAATCTAGAACTGAACGTATTGTTGCTACAAAAGGGCGGAAGCAGGTCGGGGTTGCCACAAGTGCTGAGAAAGGTCAAAGGTTTACAGCGGTATGTGCAATGAATGCTGTTGGAAATTACATTCCTCCGGCTATGATTTTCCCGAGAAAATATATGAAGCAAGAGCTAATAGACAAAGCTCCATTGGGTACAGTGGGATATGCTCAAGAAAATGGGTGGATGActatggaaatatttttaaagtggcTGTCTCATTTTAAGGTACATTCTAAGCCTTCAGAAAACAACAAAGTTTTGCTGTTATTGGATGGCCACTGCAGTCACAAAAATATTGAAGTTCTCGAATATGCTAAGAAAAATCATATCTTACTTTTCTGCTTCCCACCTCACTGTACCCATCGAGTTCAGCCCCTAGATGTGAGTTTTTTCGGTCCGCTAACGACGTATTATAACCAGGCAATAAGAACATGGATGTTTCAAAATGAAAAGCGCGTGATTAGCCACTTCCAAGTAAGAGAAATATTTAGCCAAGCCTATGCCAAAGCCGCAACAGTTGGAAATGCAACAAGTGGGTTCAGAAAAACCGGCATCTATCCGTTGGATCCCCATGTTTTCCCAGAATGGATGTTCGCACCATCCAAAACTACTGATATAACCATAGGAACATCAGATAGTGACGATCCGACCAAACACAATCAGCCCTCTCCAGAAACGAGCACTGTTAAAGAAAATGGAGCAGAACAAGCGTCTACTTCTACGGCTGATCTATCGAACCCAAAATCCGATTTGACGAAATTGATACAAGAGCTATCACCTATTCCTATGGTTACTaaccagcaaaaaagaaaaaggatAAACAAGTCGACTCATGGAGCTATTAATACAACACCCAATCTAGAAGAAGCAAGAGAAATCCATAGACAGAAGAGAGAGGTTGAGGAAAGAAAAGccgcaaaaaaagcaaaaagaaatcTAGCAATAGATGAGATGGAAAATGCGGATCCATTTTCACAAAACAATGACAGCGACGATAGCGACGCAGCATGCATCTACTGCAATGGGCTCTATTCTGAGTcgcgaaaaactgatttttggatAAGGTGTCAAAGTTGTAAATCATGGGCACATACAGAGTGCGCCGACGTAAACAGGAAGGTTAAAACCTATATATGTGATTTATGCAAACCatga
- Protein Sequence
- MMPGTNQERQMWSEDNMQEAIDAIKSKSMGYKLAAKTYSVPRSTLKRRVLEKNKISKGNRKGFLGGHQSVFSEEVELSLVSHLLEMSDRLFGLTSSDIRRLAFQLAESLKLKHTFSRKNKMTGWQWLKDFLKRHSQLSLRTPEATSIARASAFNKVQIEKYFNTLSALIQRFQFPPESIYNMDESGFTTVQSRTERIVATKGRKQVGVATSAEKGQRFTAVCAMNAVGNYIPPAMIFPRKYMKQELIDKAPLGTVGYAQENGWMTMEIFLKWLSHFKVHSKPSENNKVLLLLDGHCSHKNIEVLEYAKKNHILLFCFPPHCTHRVQPLDVSFFGPLTTYYNQAIRTWMFQNEKRVISHFQVREIFSQAYAKAATVGNATSGFRKTGIYPLDPHVFPEWMFAPSKTTDITIGTSDSDDPTKHNQPSPETSTVKENGAEQASTSTADLSNPKSDLTKLIQELSPIPMVTNQQKRKRINKSTHGAINTTPNLEEAREIHRQKREVEERKAAKKAKRNLAIDEMENADPFSQNNDSDDSDAACIYCNGLYSESRKTDFWIRCQSCKSWAHTECADVNRKVKTYICDLCKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00846821; iTF_00846214; iTF_00846220; iTF_00846829; iTF_00847437; iTF_00846830; iTF_00846831; iTF_00846832; iTF_00846833; iTF_00847511; iTF_00847004; iTF_00846238; iTF_00846239; iTF_00846304; iTF_00846826; iTF_00846796; iTF_00846229; iTF_00846770; iTF_01187029;
- 90% Identity
- iTF_00846229;
- 80% Identity
- -