Kmac039763.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010001219.1:15467-15962[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-10 2.7e-08 36.3 0.1 5 40 1 37 1 40 0.93
Sequence Information
- Coding Sequence
- ATGAAAGCAGCTATCGGAGCTGTAAGGAATAGACAGATGGGTTACTTAAAAGCATCGAAGTCGTTTGGCGTACCTCGAAGTACTTTAGTCGACTACGTCAAGTCCGGGAAGAGTGCGGATGAAATAGCGACAACATTAGGCCGAAACCCCACGTTAACAAAAGAAACTGAAGATTTATTGGTTGAGTACTGTTTTGATATGGAAAAAAGGTTCTATGGTCTGACTGCAGTTGATATTAAAAGACTGGCTTTTCAGCTAGCGTTAAAGAATGGACTGCCACATCCATTTTCACAAAATAGGGGATCTGCTGGATTTTCAATGTTGATGAAACAGGTGTGA
- Protein Sequence
- MKAAIGAVRNRQMGYLKASKSFGVPRSTLVDYVKSGKSADEIATTLGRNPTLTKETEDLLVEYCFDMEKRFYGLTAVDIKRLAFQLALKNGLPHPFSQNRGSAGFSMLMKQV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00845911; iTF_00846183; iTF_00845898; iTF_00845900; iTF_00845905; iTF_00846097; iTF_00845943; iTF_00845883;
- 90% Identity
- iTF_00845898; iTF_00845905; iTF_00845900; iTF_00845911; iTF_00846183; iTF_00845943;
- 80% Identity
- -