Kmac126455.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Kuschelorhynchus macadamiae
Gene Symbol
-
Assembly
GCA_030620095.1
Location
JAUTXW010005301.1:20046-22415[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-10 1e-08 37.6 0.1 1 41 12 52 12 55 0.95

Sequence Information

Coding Sequence
ATGCCTCAGGAAAagcgagttttttttaaatactctgagGAGTCTATGGCTCGGGCTCTAACGGCAATTAGAGAGGAAAATTTAAGTACCAGGGCAGCAAGTAAGACATTTGGGGTACCAAGAGCAACATTACAAGACAGGATAAAAGGAAGAGTTCGAGAAGGGCCTAGACAAATGGGTAGAGATCCAGTACTTACAAGAGAGGAagaatcaaaaatagtaaaatggtTGATAGATTTGTGTAAATGTGGATTCCCTCAGAAAAAGTCTGATCTTATGGACACAGTAGCGAAAATTGTTGCAGATGATAAGAGGCAAACTCTCTTTACAAATAATCGTCCAGGGGAAAAATggtataaatgttttataaagcgacatccAGAATTATCGCTTCGGGAACCTGAAGGATTAACCAAAGGAAGAGCTGTTATTACCGAACAGTACATTAAAAAGTGGTTTTCTGATTTACGGGAGTATTTGgaagaaacaaataatttagaCATTCTACTTGATCCAGAAAGAATACTTAATGGTGATGAAAGTGGCTTTAATTTGTGTCCCAAAACTGGAAAAGTGTTAGGTCCCAAAGGTGCCaggaatattttagaaataaggcGAGGAAATGACAAAGAAAACATTACTACACTTCTTGTTTTTACTGCTAGTGGAAAAACTGCAGTGCCATGTGTGGTTTTTAAGTATATTCGAATTCCAAAAGCAATTTTAGACAGCAGTGATCCATCATGGTTCATAACAAAATCAGATTCTGGATGGATGAAAAGTGAAGTTTTCTATGAATATGTTTCCACTCAGTTGCTTCCTTGGTTAAAGTCACAAAATACCAAGTTTCCAGTACTCTTTCTTATTGACGGTCATAAATCACATTTAACTACGGAACTTAGCCAATTCTCCTACGAAAATGATATTATATTGTACAGCTTGCCCCCCAATACAACCCACATGATGCAACCGGCAGATGTGGCTGTTTTCAAACCCTTAAAAACTGAGTGGAAGAAAGTAATCCGTCAATGGCTAGCAAAACCTGAAAACCGTCACTCTGCTGTTACTAAAACAACATTCTGCTCACTGCTTAAGACTGTTTTGGAAACACCTGCATTACCTCAATACATCATAAAAGGCTTTAGAAAATGTGGACTTTTCCCATTTGACCCGGACGCCGTGGATTATAGCAAATGTGTCCAAAATCACTTGGAATCAAAGGTAAATGAGAATAAGTCCAACGAAAATCCGATCACAGATGAAGAAATTGATGTCGCCAGAAGAGTACTGCTAACGAAGTTTGAAGACAGACTCGAGGAAAGTTTCACCATCGACGAATTGGTGCATCAActtaatagttttaaatcaagTTTTCAAGAGCAGCCACAGAAAAATCTAATCGAAAATGAACAAATTGAGACAAATCAGAGTCCTGTTAATTATTTTGAACACTTAGAAGAAACCGAGGACAGATTTCCTATTCAAGATTTGCCTATCATATTTCTTGATGATCCATTACCAGAAGTTATCAGTGCTGGTGTTAATTCTGATGTTTATACCACTGAAAATGATGTACAAGaacttttaatagaaaataacgaaggtaataataataatgaggaagaagaagagagaAGCAAAACAGATAAGGAAATTATACCTAAAGAAATAGAAGTTTTAACTAGTACTAATCAAATAGAATCTAATACGaagttagaaaaattaaaaactgaaatagagATGCCAGAAGCAAGTCTTGAAATAAATGATACCATAGAATTGAAGAAAATAGAGGAAATCTGTGAAACGGCTTTACCTGAAGTGAAAATAGGAGACCATCTAAAAACTGACGAGGGTGATCAAAAACTTGATTTGCAGGAGAATAGCTTGGGTGCTGATAGCGAAGTAATTCCATCAGATGCCAAAGaacataaaccaaaaattaaaatactacaagacattaaattaaatatttcaccaattGAAAAGCATTTATTTTATCCTGCACCAATTACAAAGAAGAGGAAAAACATGGATCCTCAACCAGCAGCCATCTCCTCCCCAAAATATaggaaatatttggaaaacaaaaGTGCAAACgcaattaacaacaaaaaaacacaaaataatggaaaagggaaaggcaaacaaaaaaaagaaaaaaaacctaaaagtacagctgcaaagaaaacaaaagaacGGTGCTGGGGATGCAAGGAAGAGTTGGACAGTGACTTAGATGAGGAGGATTCGGAGCATGTAGGCTGTGATAATTGTCCCAAATGGTATCACTTAAAATGTACCAGAATATCACATGCCACTACAGTATCCATGTTAAAAgaagattattttaaatgtgactTATGCTAA
Protein Sequence
MPQEKRVFFKYSEESMARALTAIREENLSTRAASKTFGVPRATLQDRIKGRVREGPRQMGRDPVLTREEESKIVKWLIDLCKCGFPQKKSDLMDTVAKIVADDKRQTLFTNNRPGEKWYKCFIKRHPELSLREPEGLTKGRAVITEQYIKKWFSDLREYLEETNNLDILLDPERILNGDESGFNLCPKTGKVLGPKGARNILEIRRGNDKENITTLLVFTASGKTAVPCVVFKYIRIPKAILDSSDPSWFITKSDSGWMKSEVFYEYVSTQLLPWLKSQNTKFPVLFLIDGHKSHLTTELSQFSYENDIILYSLPPNTTHMMQPADVAVFKPLKTEWKKVIRQWLAKPENRHSAVTKTTFCSLLKTVLETPALPQYIIKGFRKCGLFPFDPDAVDYSKCVQNHLESKVNENKSNENPITDEEIDVARRVLLTKFEDRLEESFTIDELVHQLNSFKSSFQEQPQKNLIENEQIETNQSPVNYFEHLEETEDRFPIQDLPIIFLDDPLPEVISAGVNSDVYTTENDVQELLIENNEGNNNNEEEEERSKTDKEIIPKEIEVLTSTNQIESNTKLEKLKTEIEMPEASLEINDTIELKKIEEICETALPEVKIGDHLKTDEGDQKLDLQENSLGADSEVIPSDAKEHKPKIKILQDIKLNISPIEKHLFYPAPITKKRKNMDPQPAAISSPKYRKYLENKSANAINNKKTQNNGKGKGKQKKEKKPKSTAAKKTKERCWGCKEELDSDLDEEDSEHVGCDNCPKWYHLKCTRISHATTVSMLKEDYFKCDLC