Kmac042623.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010001336.1:1787705-1789602[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-10 1.2e-08 37.4 0.0 1 40 15 54 15 58 0.95
Sequence Information
- Coding Sequence
- ATGCCGCGAACATATGTTCGAAAAACTGGACGTTCTTCGTGGACGGAGGAGTCTATGAAAAGAGCAATAAAGGCCGTGGGAGAAAAGACATTATCCATTAGGGGCGCcgcacaaatgtttaatatcccatatggtactcttcaagatagactaaaaggtagatttcaaccaaaaaaacttacgttgggaagaaaacctgtcttttccgaaaatcaggaaaaagaaattgttgaaaccattttaaaattgtccaaattattttatggattgacagctcaaagcataagaacattggtttttaaatatgcagagacaaataaaattacacatccttttaataaggagagcgggatgtgtggcaaggattggatctactcatttatgcgacgttatccgcagcttagttttcgtaaaccggaagctactagcctaagcagagttaccgcatttaacaaaggtgaaatggaatttttttttaataatcttgtaatgctttttgaaaaataccattttgaagttcatcgcatttataacgttgacgaaacgggtatttccaatgtccacaatccgagtcgtatattggcaagaaagggagagaaacaagtcggcgtgataacaagcggagaaaggggtcaaaacactacaattgtatgctgttttagtgcgtctgggcaatatatcccgcccatgtttatttttaagagaatgagaatgaaagatggtttggaaaaaaatggaccggcaggcgcgatatacaaatgttcaaaatctggatggattaccgaagaattgtttaccgaatggttgcaacattttgcgaaatttgctaatgcttctccagagcaacctattcttctagtactggataaccattcaactcatttttctttggcttcctacactttttgtagaaattctggcattcatttactatcacttcccccccacacatctcacaggacacagcctctggacgttactttctttaagtccttgaaaactgcttaccaccaagaatgtgataagtacataaaaagtagaaattatgaaaaaatcaaagagactGATATTGCCGAACTTTTTGGGAATGCTTACAATAGGACGACCACAATAGAGAAGGCAATTAACGGATTTAAGACCACAGGAATATTTCCCATCAATCGTGATGTGTTCTGTGAAGAAGACTTTGTACCTATTCATAAAGATAATACAGATCTGCCAAATACAACGGCTCCAGCAGATTTACCATTGCAGGGAAATACATCTCAGAATATTAGGAACTTTTTGGAAGAAGTTGTGGAAGATAGCCTAAGTGATGATggtgataaaaccttaaaaattaaagaaaaaacagaaaatacttctttccaagacctatgtccacttccaatgtttcaaccaagaacttcacagcgaaaaaggcaacattctcaaatattaacatctaccccattaaaagaagagctcgaaaataagacattgaaaaaacaaaaaaaggaagaaaatgaaaaattaaaaaagattacaagaaaaattgcagacagagaaaagggaaatgaaaagattaagaaggtcacaaaaaaaattatgggtaaagtggaaactcaggttgaacaggaaagagaaattgatgaaatctgtcctatttgtgaacaatttggatacaatgaggtttggtggcggtgccgttcttgtgcaacctgggctcatgctgactgtactagtgcagaaaaagcttcagtatatatttgtgacttttgctcaatgtaa
- Protein Sequence
- MPRTYVRKTGRSSWTEESMKRAIKAVGEKTLSIRGAAQMFNIPYGTLQDRLKGRFQPKKLTLGRKPVFSENQEKEIVETILKLSKLFYGLTAQSIRTLVFKYAETNKITHPFNKESGMCGKDWIYSFMRRYPQLSFRKPEATSLSRVTAFNKGEMEFFFNNLVMLFEKYHFEVHRIYNVDETGISNVHNPSRILARKGEKQVGVITSGERGQNTTIVCCFSASGQYIPPMFIFKRMRMKDGLEKNGPAGAIYKCSKSGWITEELFTEWLQHFAKFANASPEQPILLVLDNHSTHFSLASYTFCRNSGIHLLSLPPHTSHRTQPLDVTFFKSLKTAYHQECDKYIKSRNYEKIKETDIAELFGNAYNRTTTIEKAINGFKTTGIFPINRDVFCEEDFVPIHKDNTDLPNTTAPADLPLQGNTSQNIRNFLEEVVEDSLSDDGDKTLKIKEKTENTSFQDLCPLPMFQPRTSQRKRQHSQILTSTPLKEELENKTLKKQKKEENEKLKKITRKIADREKGNEKIKKVTKKIMGKVETQVEQEREIDEICPICEQFGYNEVWWRCRSCATWAHADCTSAEKASVYICDFCSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00846084; iTF_00846598; iTF_00846087; iTF_00846088; iTF_00846090; iTF_00846091; iTF_00847147; iTF_00846092; iTF_00846255; iTF_00846607; iTF_00846064; iTF_00846073; iTF_00846078; iTF_00846110; iTF_00846370; iTF_00846061; iTF_00846102; iTF_00846075; iTF_00846077; iTF_00846079; iTF_00845856; iTF_00846080;
- 90% Identity
- iTF_00847147;
- 80% Identity
- -