Kmac117837.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- clz9
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010005030.1:367175-369265[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-10 1.2e-08 37.5 0.0 1 40 15 54 15 59 0.92
Sequence Information
- Coding Sequence
- ATGGTCCGAAATTACAACCGTACGAAACCTTTGCCATCATATACAAAAGAAGCTCTTAAAGCCGCAGTAGATGCCGTTAAAAGTGGTAGTTTATCATTGTGTAGAGcatctaaattatataatattccgAAAGCCACTATATTCAAACATAAAGCTGGACAACGTGgagtaaaaagtaaaacaatgggTAGGCCACCAGCTCTGCCCTTTGAAGTAGAAAACAATATTGCTAGCAACATAAAAACCATGGAAAAATGGGGGTTTGGCCTATCCAAAAAAGAAGTACTGGAACTAATCGAACAATATGTCAGGGAAAATAATATACCCACCACATTCAAAAATGGTGTACCCGGGGACGATTACTTCAGAAGatttaaaagagattttaatttgaGCCAAAAAAAACCACAAAGCGTGGAGGTTGCAAGGAAGAGAAGCTTGGATCCTTTTATAATTTctgagtattttaaaattttaaaaaaagaaattaaagatttattacCATCTCAGATATTTAATATCGACGAGACCAGTTTCTGTCTCGACCCCTCCCGGATTAAAGTTGTTGGAGAAAAAGGCACTGCTGCTCATAGAACTACTAGTGGACCCGGGCGAGAAAATATAACAGTCCTAATGGGAGCAAATGCAGTAGGAGAAAAGTTGCCGCCTCATGTCgtatttaagggcaaaaatttgTGGGACTCTTGGATTCCAAATAAAGATGAAGAATTTCCTGGCATGACATATTCTACTACAAAAAATGGCTGGATGGAGGCGGGTACTTTTGAACATTactttgaaaacaattttttaaaaagcgtAGGCCTCGAGAGACCAATTGTTCTAATTTACGATGGACACAGTTCACATGTTTCGATTACAGTtgtagaaaaagcaaaagaaaatggcgtggtTATTATCAAGTTACCTCCTCATTCAAGTCACGTCTTACAACCCATGGACTTAAGTGTATTTAGGCCGCTAAAATTATTATGGGATGAGGACTTAATTAAATGGCAAAGAAAAAACTATggcaaaaaattgccaaaaagtatgttttgtgCAATCATTTCAAAAATCTGGCAGCGATTAGACACAAAGATTATAATTAATGGATTTGCAAAAGCTGGCATATATCCATATAATAATAACATCCCAGAAGAAAAATATGAACCAGATGCATTTCGACGATGGGGTCTTCTGCAAAATACTGCCACCCCTGAGCCAATGCCCGATTCTATTCTGCCAACAAATGAAAATCTTCACGTTAGCAATATCGAACCAGTTGCATCTACATCCAAATCAGTATTATATGGTCAAAATATTTCAGAATACTCTTCAAAATCATTAAATGAGAGTAGGAGTGCTTCCCTTGTAGAAGTTGATAATGTATCAATTTCTCAACCTAACACAGCAGCTGATATAATCACTCCGTCTATGCCGATTACACAAAAAAGATCATTTGAGTCGTTGCTTCTAGAACACGTAAAACAGGCACCCCAATCCAAAAccggaagaaaaaaaatatgcagtGGAGCAGAAGTTATTACATCTTCTGAGGCTATTCAGAaactaaaagaaatagaaaagaacaaaagtaagaaatctGTAAGAcctaaaaaactagaaaaaggAAACGATTCGCAAAAAGAAAAGAATAGTGACATAAATGACGTGGATAGTGAGAATGAATCTTTTAAAAGTGATTCATCTGAAGATTTTGATTTAGAAGAGGAATTCAGAGAAATTGAAAAGGAGACATCTTTTATGCATAATGTTACTAAAGACATAACAACAGCCGAAGTTGGTAACTGGATAATAGTGAAATTGCCtactaaaaaatcttataaattttatgTTGCTCAAATTATCTCAAAAGAACCATGTCTCGAAGTAAAATTTGCCAGAAACATACGTTTAACATCAACGTTTCATTGGCCTGATGAAGACGACCAGTCAGTAATTAATCCACATGAAATTCACACGTATTTGCCCAATCCTACACTTGAAAAAAGGGGAAAATTTaggtttgacattttttttaaatggattccctttactattaacataacctttacggctatgttttga
- Protein Sequence
- MVRNYNRTKPLPSYTKEALKAAVDAVKSGSLSLCRASKLYNIPKATIFKHKAGQRGVKSKTMGRPPALPFEVENNIASNIKTMEKWGFGLSKKEVLELIEQYVRENNIPTTFKNGVPGDDYFRRFKRDFNLSQKKPQSVEVARKRSLDPFIISEYFKILKKEIKDLLPSQIFNIDETSFCLDPSRIKVVGEKGTAAHRTTSGPGRENITVLMGANAVGEKLPPHVVFKGKNLWDSWIPNKDEEFPGMTYSTTKNGWMEAGTFEHYFENNFLKSVGLERPIVLIYDGHSSHVSITVVEKAKENGVVIIKLPPHSSHVLQPMDLSVFRPLKLLWDEDLIKWQRKNYGKKLPKSMFCAIISKIWQRLDTKIIINGFAKAGIYPYNNNIPEEKYEPDAFRRWGLLQNTATPEPMPDSILPTNENLHVSNIEPVASTSKSVLYGQNISEYSSKSLNESRSASLVEVDNVSISQPNTAADIITPSMPITQKRSFESLLLEHVKQAPQSKTGRKKICSGAEVITSSEAIQKLKEIEKNKSKKSVRPKKLEKGNDSQKEKNSDINDVDSENESFKSDSSEDFDLEEEFREIEKETSFMHNVTKDITTAEVGNWIIVKLPTKKSYKFYVAQIISKEPCLEVKFARNIRLTSTFHWPDEDDQSVINPHEIHTYLPNPTLEKRGKFRFDIFFKWIPFTINITFTAMF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00846018; iTF_00845925; iTF_00846002; iTF_00846035; iTF_00846004; iTF_00846041; iTF_00846298; iTF_00846049; iTF_00846011; iTF_00846048; iTF_00846046;
- 90% Identity
- iTF_00845925;
- 80% Identity
- -