Kmac122564.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010005195.1:487722-489518[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-10 9.1e-09 37.8 0.1 5 40 22 57 19 61 0.93
Sequence Information
- Coding Sequence
- atgccgaGAACATATGTAAAGAAGTTGGGGGTTTGGGCTAACCGGACGTATGACCCAGTATATTTAGAAAGAGCAGTGGCGGCGGTTCGCGAGAGACGGATGAGTATGCGGCAAGCCTCTGAAAATTATGGAGttccatttacaactttaaataggAGAATTCACGGTAGGGCAATGGGCAAATATGGTGGTCAAAAAGTGTTAAACGACGAGGAAGAAAATAAGTTGATTCAAGTATTGTTGTTATGCGCCGACTGGGGATTTCCTCTTAAAAGTTACGACGTACGATTTATGGTACAGCAATTTTTAAACATGTGCGGCAAGAGAGAAAAGCGCTTTAAGGACAATCTTCCCGGCAACGACTGGTTCAAAAGCTTTATGTTAAGGCAttcaaatttaacattaaaattagcagAAAATACTAAGAGAGTGAGGGCTGCTGTATCATACGAAACTGTGGAGGACTATTTTTCCAATCTGAGACAAACAATTGAAGGTGTGCCTCcttcaaatataattaattttgacgAAACTAATTTTGCTGACGATCCAGGGGCAGTCAGAGTTGTAGTAAAACGTGGTATTAAGCATGCACACCGAATAATTGACACTTCAAAATCGAGTACAAGTGTAATGTTTGCCGTTGCTGGAGATGGCACACTTCTTCCACCCTACGTGGTGTACAAGGCCAAACATTTATATCCAGGGTGGATGGAAGGAGGCTATCCTGGATCGAGATATGGCCGAACAACTAATGGTTGGTTTGACAGTGACTCGTTTCAAGAATGGTTCCTAACAATTGCCTTGCCATACTTGCGATCATTGGATGGGCCAAAAGTTATGATTGGCGACAACCTCAACAGCCATTTAACTATAAATGTTGTCCAACAAtgtgaaaataatgatataaaatttgttttgctgcCACCAAATTCTACACATATGCTACAGCCGTTGGATGTAGCTTACTTTCGGCCATTTAAAGCTGCTTGGCGTAGTGtgcttgaaaaatggaaattaaaaaatcggggTGTCCTGCCCAAGACTGTTTTTCCACGTTTATTGAATGACACTATAAAAATTGTTGGTGCAAGATCAGAAGCCAATACATTAGCAGGATTTAAGGCATGTGGCATACCACCATTTCAGCCAgacgttgttttaaaaaaaattagacatcttAGAGCAAGGCCCGAAGAAAGACAAGAAGAACAGCAAATAGAAAGAGCTTGGTGTAGCACAATTGTTGACCATCTAAGCCAAATGAGAACTGGAAGTGGAGAAGCTTCAAAACGGGGGAAAAAATTAAGTGTACCAGCAGGTAAAAGTGTTTCAGTGTCTGATCTTTTACCGACAATAATGAGCGACCAGTTAGAAGAAGAACTAGAAATCGAGGCAATAGAAAGGGGAATAAACCAGGAAGAAGAATTGGACCTAGATCAAAGGTTTCCAGACCAAATTCTTGATCATGCAGAACTAGACGAACAAACTCCAGGTTGTTCTCGAGACGATCCCATATCATGTCATTTTAAAGTTGGCAATTTTgtcattgtaaaatataaaacaaataaaagagaTAGGCTGTTTATAGCCAAAATTGAAGCTATAAATGGACAAGAATATTCTGTTAATGCGCTGagaaagaaaaaaactgaaaaacaagttttttttgtgttccCGGACGTCTCAGACATTTCcctaatcaataaaaaacaaatagttacgAAAGTTTTGGGAAAATTAGGCCGAAGAGGAACATATGTTTTTCAGAATGTGCaggattttaatttagaataa
- Protein Sequence
- MPRTYVKKLGVWANRTYDPVYLERAVAAVRERRMSMRQASENYGVPFTTLNRRIHGRAMGKYGGQKVLNDEEENKLIQVLLLCADWGFPLKSYDVRFMVQQFLNMCGKREKRFKDNLPGNDWFKSFMLRHSNLTLKLAENTKRVRAAVSYETVEDYFSNLRQTIEGVPPSNIINFDETNFADDPGAVRVVVKRGIKHAHRIIDTSKSSTSVMFAVAGDGTLLPPYVVYKAKHLYPGWMEGGYPGSRYGRTTNGWFDSDSFQEWFLTIALPYLRSLDGPKVMIGDNLNSHLTINVVQQCENNDIKFVLLPPNSTHMLQPLDVAYFRPFKAAWRSVLEKWKLKNRGVLPKTVFPRLLNDTIKIVGARSEANTLAGFKACGIPPFQPDVVLKKIRHLRARPEERQEEQQIERAWCSTIVDHLSQMRTGSGEASKRGKKLSVPAGKSVSVSDLLPTIMSDQLEEELEIEAIERGINQEEELDLDQRFPDQILDHAELDEQTPGCSRDDPISCHFKVGNFVIVKYKTNKRDRLFIAKIEAINGQEYSVNALRKKKTEKQVFFVFPDVSDISLINKKQIVTKVLGKLGRRGTYVFQNVQDFNLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00846019; iTF_00846051; iTF_00846052; iTF_00846053; iTF_00846245; iTF_00845993; iTF_00846025; iTF_00846032; iTF_00846512; iTF_00846257; iTF_00846738; iTF_00846101; iTF_00846038; iTF_00846009; iTF_00846042; iTF_00845981; iTF_00846045; iTF_00846047; iTF_00846016; iTF_00846055; iTF_00846031; iTF_00846294; iTF_00846044; iTF_00846039;
- 90% Identity
- iTF_00846051;
- 80% Identity
- -