Kmac100175.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010004416.1:50462-52402[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-10 8e-09 38.0 0.0 4 37 21 54 18 58 0.93
Sequence Information
- Coding Sequence
- ATGCCTCGAAGTTCATTATCCCCAAAAGCAAAGggtaaaagaaaaacatgggacaAACAAGCAATGGCTGAAGCTGTAGAAATGGTGCGTTCTAAAAGAATGGGCCTGAAAAGGGCTGCAAGGTTGTTTAAGGTGCCAAAAACAACTCTACAAAGGCTAGTTCACGACACAGAATGTTCACCCCAAGAAGTTGTCGAAAAAAAATTAGGTAGAAAACCAGTTTTTCCtgttgaaattgaaaatcaattagTTGAATACTTGCTGCTGATGGAGAGCAAATATTTTGGGCTTACCCGGCGAGACGTTAAAGTAATGGCTTATCAGTTGGCAGTTAGAAACGGAATAAAGCATCCGTTTGGGAATAAAGAAGAAGCAGGTCGTGCTTGGCTGGACCATTTTTTATATCGCAATAAACAAAGACTTTCTATCCGGACTCCAACCGGAACATCATATGTTCGGGCAAATGGTTTCAATAAAGAATCTGTAGCTATCTTTTTTGATATTCTCGAGATAGagtatgaaaagaaaaaatacacgGCAGACCGCGTATTTAATGTAGACGAAACCGGCTTGTCTATAGTTCAAACTAAAATACCTAAGGTGATAGGGTCAAAAGGAAAACGGCAGATCGGTGCGCTGACGGCTGCCGAGAGGGGTTCATTAGTGACTACCATTTGTGCAATGAGCGCTTCCGGTATATTTGTTTCGCCTATGTTGATTTTCCCAAGGAAAAATATGACTGAAACTCTGATGAGAGGCGCACCTCTCGGAAGTATTGGAAGATGTCATCCATCTGGCTGGGTGCAAAGTAATTTATTTACTGATTGGTTTAAGCATTTTATCAAATGCACAAAACCAACAATAAATGACCCTCTGCTCCTAATCCTCGACGGACATTATACTCATACGAGAAACGTAGAAATAATCGAACTAGCGAGAGAAAATCACATAACCATAGTATCCCTTCCTCCGCACTCCACCCACAAGTTGCAGCCGTTGGACAAAACATTCATGGGAGCTTTAAAAACCCACTATAGTGAGGAGATTCGTATATGGTTGCGTCAAAATGAACGTCCTTTGGGTCCCTATGACATTGCAGAACTTTTTGGAAAAGCATATTTGAAGTGTCAAACTGCAAGTATAGCCATAAATGGGTTTTTAAAAACTGGGATATTTCCTTGCAACAGGGGTATTTTTACGGAAAAGGATTTTATAGCTGCTGAGCATGAAGCAATATTGGCTGAAGCTACAGATCAACCACCCATTCATCATAGAGCAAGTCCAACACCAACAACGGATGTCCCTAAACTAAAACGTGCATCTACTTTTGATATCAGTGAAACTGACCTGGCAGAAGCAGGTTGTAGCTCAGCAAAAGCCCCGGCAACTTCAAGTAACTTCATTGTTTCTCCTTCGGTTATTTGGCCGGTTCCAAAGCcaaaaagaaaaacgtcaaacAGAGGACGGAAGGCTTCTTCGGCTGCAGTAATTACGAGCTCTCCGTATAAAACAGATTTGGAAAATTCGCTTTTAAAATCTAGTGGTACAAAAAAGATTTTGAGCCTTCAATCTCGCGGATTCAGCAGGGATAATGGAAAAGCTGGTTGCAAGCGACTAACTTTAAAACACTCTGGGAAAACGGCGAGTAGCATCAAAATTAGTTCAAAGAAAACTCAAAGAAAAATAGCTGAATCCTCTGAGTCGGATGAAGACGATAACGATGACATAATTTCCTCAGGTACCTCAGGTGATATGGAAAACCCAGTTGAAAACGTACCTTCCAGCACAGATAATGATGCGGAGTGCATGTTTTGCACACAACGATTTTTGGAAGATAGGAAAGGGGAACAGTGGGTCCAGTGTCTTATGTGCCAGTTATGGGCACATATTTTATGTTCTGGTTGTGAAAAGGCCGACTGGGTCTGTGATTTTTGTCAATAA
- Protein Sequence
- MPRSSLSPKAKGKRKTWDKQAMAEAVEMVRSKRMGLKRAARLFKVPKTTLQRLVHDTECSPQEVVEKKLGRKPVFPVEIENQLVEYLLLMESKYFGLTRRDVKVMAYQLAVRNGIKHPFGNKEEAGRAWLDHFLYRNKQRLSIRTPTGTSYVRANGFNKESVAIFFDILEIEYEKKKYTADRVFNVDETGLSIVQTKIPKVIGSKGKRQIGALTAAERGSLVTTICAMSASGIFVSPMLIFPRKNMTETLMRGAPLGSIGRCHPSGWVQSNLFTDWFKHFIKCTKPTINDPLLLILDGHYTHTRNVEIIELARENHITIVSLPPHSTHKLQPLDKTFMGALKTHYSEEIRIWLRQNERPLGPYDIAELFGKAYLKCQTASIAINGFLKTGIFPCNRGIFTEKDFIAAEHEAILAEATDQPPIHHRASPTPTTDVPKLKRASTFDISETDLAEAGCSSAKAPATSSNFIVSPSVIWPVPKPKRKTSNRGRKASSAAVITSSPYKTDLENSLLKSSGTKKILSLQSRGFSRDNGKAGCKRLTLKHSGKTASSIKISSKKTQRKIAESSESDEDDNDDIISSGTSGDMENPVENVPSSTDNDAECMFCTQRFLEDRKGEQWVQCLMCQLWAHILCSGCEKADWVCDFCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00845890; iTF_00845986; iTF_00845987; iTF_00846371; iTF_00845989; iTF_00846191; iTF_00845969; iTF_00845938; iTF_00845979; iTF_00846208; iTF_01351585; iTF_00845980;
- 90% Identity
- iTF_00845979;
- 80% Identity
- -