Kmac111281.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010004793.1:241947-243500[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-11 2.3e-09 39.7 0.1 2 41 19 58 18 61 0.91
Sequence Information
- Coding Sequence
- atgcCGACCCGATACAAACGAAAACAATCTGCTAAGCCAAGAAAACAGTGGCGTGAAGAACATTTAGTAGCTGCTATTGAGGCTATAAATTCTGGTGAGATGGGCACTAATGAAGCTTCAGCTGCCTTTGGTGTACCATCTAGAACGTTACGTCGGCGCATCAAATCAGGAATTACCAGGGATCTTCCTCTAGGCCCTGAAGGATGCTTAGGCACTGTAAATGAAAAACGACTAGTAAAACATGTACAGAAATTGGAAAAATGTGGTTTTGCGCTTGATAGAGAGTCACTTAGATCCCTTGCTTATCAGtttgctgaaaaattgaaaattaagcaCAGATTTAATCGTGAAACACAAATGGCAGGCTATGACTGGCTTAACTCGTTTTTGCGACGTAACCAAGAAGTGAGTGTTAGAGCAGCTCAAGGATTGTCTATTGCTAGGGCAGAAGGTATGGATCGTACggaagtaaataagttttttcatCTGCTTAATGAGGTTTACACGGAATACAACATGTTTGTAAAAccgagtaatatttttaacatggacGAGACCGGCTGTCAAATCAACAACGAAGCCGGAAAAGTTATTGCAACTAAGGGAGCCAAAGATGTCCATGTACTCAGTTCAAGTGAAAGAGGTGAGAACGTAACAATAATAGCTTGCTGCAATGCCGAAGGCAATTTTATACCACCAGTGCTCATATTTAAAGGAGTAAGAGAAAAGCAGGAATTTAAAGATGGACTTCCACTAGGGTCAacagtttttatgaacaaaaagtCGTCCTATATCTCATCAGACCTCTTTCTAAAATGGCTTCAAGAACATTTTGTTCCTAAAAAGCCTCCTGGTCCAACTATTTTAATACTCGACGGACATTCATCCTATATGAATTCTATGGAAATGCTCAACTTCgcagaacaaaatgaaataattttagtgtgcTTACCAAGCCATTGCACCCAAGCCATACAGCCACTTGACAGATCGTTTTTCCGgcccttaaaacattttttaagaaaagaagccAGACAATGGATGATAAATTACCCTGGGAGACGTCTTACTCGCCTGCAAGTTGGTAAAATCATAGGAGCTGCATGGGGTAAAGCAGCTAATGTTGAAACTGGTGTCTCTGGGTTTCGGGCATCAGGAATTTTCCCACTTGATCCGGCGGCCATTCCTGACCATTTTTGTCACATTTCGGATAATATGTCTCAACATACAGTGGAAAATTCTACAGGTAAAAAGAGCTCTTCTTTAAAGGAACATCAAAACCCAAATTCTGTTTTAGAGGCAGCCCCGGAAAAAGCTCAGTCCGACAaatctattttagaaaaagttagcGTAGAACAAGAACCGGTTCCAGGTACAAGCTCAATGATAGTACCAGATGGTGTTCATCCAAAAAAAACCCCTTCAAAATATCTGCAAGATATTAGTCCGGTGCCAATTCttccaaaatcaattaaaaaacgaaAGAAGCAATCTGCCGAAGTTTTGACAAAGCGAAACCCAAAATCAAAAAAACGATTTTTCCTCCTCGGATGA
- Protein Sequence
- MPTRYKRKQSAKPRKQWREEHLVAAIEAINSGEMGTNEASAAFGVPSRTLRRRIKSGITRDLPLGPEGCLGTVNEKRLVKHVQKLEKCGFALDRESLRSLAYQFAEKLKIKHRFNRETQMAGYDWLNSFLRRNQEVSVRAAQGLSIARAEGMDRTEVNKFFHLLNEVYTEYNMFVKPSNIFNMDETGCQINNEAGKVIATKGAKDVHVLSSSERGENVTIIACCNAEGNFIPPVLIFKGVREKQEFKDGLPLGSTVFMNKKSSYISSDLFLKWLQEHFVPKKPPGPTILILDGHSSYMNSMEMLNFAEQNEIILVCLPSHCTQAIQPLDRSFFRPLKHFLRKEARQWMINYPGRRLTRLQVGKIIGAAWGKAANVETGVSGFRASGIFPLDPAAIPDHFCHISDNMSQHTVENSTGKKSSSLKEHQNPNSVLEAAPEKAQSDKSILEKVSVEQEPVPGTSSMIVPDGVHPKKTPSKYLQDISPVPILPKSIKKRKKQSAEVLTKRNPKSKKRFFLLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00846382;
- 90% Identity
- iTF_00845914;
- 80% Identity
- -