Kmac035696.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010001097.1:196681-200225[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1 2.2e+02 4.6 0.0 23 40 36 53 26 58 0.86 2 2 5.8e-10 4.1e-08 35.7 0.0 3 37 588 622 586 626 0.93
Sequence Information
- Coding Sequence
- atgggccCTTATAAACGAACTAGCAATCGCCAATTCAAATTtacagaaagtattctaaatgaaataaagaaaaaggtaGCTGCTGGCCAATCAAAAAGGTCGGTTGCAAAAGAATATGGAATCCATGAGGCTACATTAAGAAAACGGCTTAAAGTTGGAAATGTGCCGACTTCATTGGGAAGATATAAGCGAGTATTTACCGAAGAGAATGAACTAGAATTGGTGAAGAGGATCAAAGAATTAGACGAGCTATTTTATGGACTCCAGGCTAAAGAATTGCGCAAATTGGTTTACCAGTTCGCCGAACAATTGAAACTTTCTCACCCTTTTAATAAAACCACTAAATTAGTCGGCAAAAAGTGGCTTACAACTTTTTGCCAAAAGCATAATCTTTCGGTACGACAACCCGAGAAGGTGAGCATAGCTAGAACTATTGGGTTTAATAAAGTCCAAGTATCAAGGTTTTTTGCTAATTTATTGCGCCTTATTGAAACTCATTCGTTTAgtggcaaaaatatttacaacatggaCGAAACTGGGATGTTGACAGtcccaaataaaataccaaaagttgTGAGCATTAAGGGTAAAAAAGCGGTGGGAAAAGTTGTTTCGGGCGAAAGGGGAACATTAATAACAGCTGTGTGTTGTGCAAATGCTAGAGGACTATATTTGCCACCTGCATTAATATTCCctagaaaaagagaaaaacaagagTTTCTGTATGGTGCTCCAGAAGACACCATTTTGATGTTATCAGATTCTGGCTTTATTAATGCAGAGCTTTTTATTAAGTGGTTAAATCATTTTAACCAGCATGTAAAACCGTCAATTAAAGACCCAGTACTATTAATACTGGACAACCACAGTTCGCACATCAGTTTAGAAGCGATATCGTTTTGCCGTAAAAATGGAATTCATCTACTTAGCCTGCCGCCTCATTGTAGTCACAGGCTTCAACCATTAGACGTTGGGTTTTTTGGTCCGCTGAAAGCGGCCTATTGTCAAGAGGCAGATACCTGGATGACTCTAAATCCTggtaaattaattacaatatatcAGGTGGCAGGACTATTTGGCAAAGCATATGCTAGAGTGGCATCCCTTCAAAATTCGGAAAAGTCTTTTTCGGCTACGGGAATATGGCCCTATAACCCTAATGTCTTTTCAGAAGTTGATTTTGCGCCCTCCACGGTAACTTCTTCAGAAGTCTTAGAATCGGACATTGAAATTATCATTGAAAATGGAGATTTAGAACAAGAGATATTGAAAGATTTGCCAGCAGAACCAAGGATTTTAGCTACAGCTGAAACACCCGAGGTAGTAGCCCCGCACTTGGATATAGGTTCAGCACCTATTCAACTTGTTAATTCTCCAAAACCTGGCCCGAGTTGGGCCGTTGATCCTCAGACGCCaccaaaaagttctttttcagaAGCTATGCCTTCGCAGTTGCCATCTGAAGAGGaccaaaacaaaatagaCATGAGTGTCTTGGATAAATTGTGTCCAATACCGCGGAAACCTCGCTGTGTAAAAAAACGGAAAGCTGCAAGTAAGAAATCAGAAGTTTTAACGAGTACTCCATTTAAGGACTCATTAGAAGAAGAAAAcgtgaacaaaaaaaagaaaactcaagttaaacggaattttaatacaaaaccaaataagactgaaaaaccaaaaaaatgtgataaagagAAAGTGGATAAGGAGAGAGAAATATCAGGGATGTGGCCTGAGAGAGGTTCTTGGTCCGCAGAGGATTTATACTCTGCTGTTAATGCAGTAGTGTTGGGCCAAATGGGTATAAACGAAGCAGCGAACTCATTCGGCATTCCAAAAACCACGTTTAAACGCAGACTTGCAGCTAGCAATTTGAATAAAACGGATTGTTTGGGCCCTAGCAGCGTCCTCGGTAGAGAAGTAGAAGCGAAGCTCGCTAACCacatcaaaaaattacagaagagAGGCTTTGCATCGACTAGACAGGAAGTACGAACAATGGTATAA
- Protein Sequence
- MGPYKRTSNRQFKFTESILNEIKKKVAAGQSKRSVAKEYGIHEATLRKRLKVGNVPTSLGRYKRVFTEENELELVKRIKELDELFYGLQAKELRKLVYQFAEQLKLSHPFNKTTKLVGKKWLTTFCQKHNLSVRQPEKVSIARTIGFNKVQVSRFFANLLRLIETHSFSGKNIYNMDETGMLTVPNKIPKVVSIKGKKAVGKVVSGERGTLITAVCCANARGLYLPPALIFPRKREKQEFLYGAPEDTILMLSDSGFINAELFIKWLNHFNQHVKPSIKDPVLLILDNHSSHISLEAISFCRKNGIHLLSLPPHCSHRLQPLDVGFFGPLKAAYCQEADTWMTLNPGKLITIYQVAGLFGKAYARVASLQNSEKSFSATGIWPYNPNVFSEVDFAPSTVTSSEVLESDIEIIIENGDLEQEILKDLPAEPRILATAETPEVVAPHLDIGSAPIQLVNSPKPGPSWAVDPQTPPKSSFSEAMPSQLPSEEDQNKIDMSVLDKLCPIPRKPRCVKKRKAASKKSEVLTSTPFKDSLEEENVNKKKKTQVKRNFNTKPNKTEKPKKCDKEKVDKEREISGMWPERGSWSAEDLYSAVNAVVLGQMGINEAANSFGIPKTTFKRRLAASNLNKTDCLGPSSVLGREVEAKLANHIKKLQKRGFASTRQEVRTMV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -