Kmac077893.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010003262.1:277039-277653[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-12 4.4e-10 42.0 0.0 1 34 8 41 8 50 0.92
Sequence Information
- Coding Sequence
- ATGGCCAAACGACTTCTATATACAGAAGAAGATATGGAAAAGGCAATTAGTGCATGTAGAGCAAAAACTATGTCTATTAGAAAAGCAAGTGTGGCTTTTGGTGTGCCAAAAACGACTCTACTAGATAAATTAGCCGGAAGAGTACCAATGGGTAAGAAGAATGGGCCTACTTCTATTTTGACAGCTGAAGAGGAAAAGCTGCTGGTATCTTGGATCCTCAGGTCAGCACAAGCTGGTTTTCCAATTTCAAGAGATCAACTGGCAGACAGCGTTCAATTATTAATGAGGGAACTCAAGAGGGAAAATCCATTTCCAGAAGACCGACCCCAGCGCCACTGGCATGAGGCCTTCTTAAGAAGACATCCCGAAATTGTTAGAAGAGTGCCTCAAAATTTGTCTGGACAAAGAGCAAACGTGACAGAAAATAAAATTCGTGAATGGTTCAAAGAGGTTTCCTTATACCTAAgtgaaaaaaacatattggtgCTAAATCCACGGCAAGTTTATAACTGCGATGAAACGGCATTATCTCTTTGCCCTAAAGGAGAAAAAGTTCTCACAGAAAAGGGTCAGAAGACCGTATACTCAGTCTCTAAAAATGATGAAAAGGAATAG
- Protein Sequence
- MAKRLLYTEEDMEKAISACRAKTMSIRKASVAFGVPKTTLLDKLAGRVPMGKKNGPTSILTAEEEKLLVSWILRSAQAGFPISRDQLADSVQLLMRELKRENPFPEDRPQRHWHEAFLRRHPEIVRRVPQNLSGQRANVTENKIREWFKEVSLYLSEKNILVLNPRQVYNCDETALSLCPKGEKVLTEKGQKTVYSVSKNDEKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00845848; iTF_00846241; iTF_00845801;
- 90% Identity
- iTF_00845801; iTF_00845848;
- 80% Identity
- -