Kmac047375.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010001557.1:1644242-1645581[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-10 1.4e-08 37.2 0.0 2 41 42 82 41 84 0.96 2 2 6.6 4.6e+02 3.5 0.0 22 41 105 125 104 129 0.86
Sequence Information
- Coding Sequence
- ATGATAGGTATGATGATAGGAATCACTAAAAAAGGATATGTTCCAGAAAGCGTTAAACCGTGGGCCCCTAAAACACGTTTACAGAAGGAATCCACTGGTTCCAGACGCAACCGCAACTACGCAGAAGAGGATCTACTTAATGCAGTTGCTCAAATAACAAAAGGTAGACTttcttatcagcaagcttctgaTTTATTCCACATTCCAAGAAGGACGCTGTGGAATAAGGTCCATAGAAGGCACCCACTAAAACCCGGAGGTGTCACAGCTTTAACCGAAATTGAGGAACGTCATCTAGTCGACGTATTATTGGCTGCAGCCGAATTCGGGAGTCCAGTGACCAGTTTAGAATTAAGGTATGTAGTTAAACGTTATTTACATAAACATGGAAAGACGATACAAAAATTCCCAAATAATGTACCTGAAAAAGATTGGTGCCTTAACTTTATAGAGAGGCATAACGACAAATTATCTCAGCGAAGTTGTCAAAACATCAAGGGAGTAAAACCACAAAAGACCGAAGAAGAAATTATTTCCTATTTCGAAAATCTTGAAAATTCTCTGGAAGGGGTTCCCCCAGAGAATATTCTAAATtatgatgagacaaatttgtctGACGATCCAGGGtccaaaaaatgttaa
- Protein Sequence
- MIGMMIGITKKGYVPESVKPWAPKTRLQKESTGSRRNRNYAEEDLLNAVAQITKGRLSYQQASDLFHIPRRTLWNKVHRRHPLKPGGVTALTEIEERHLVDVLLAAAEFGSPVTSLELRYVVKRYLHKHGKTIQKFPNNVPEKDWCLNFIERHNDKLSQRSCQNIKGVKPQKTEEEIISYFENLENSLEGVPPENILNYDETNLSDDPGSKKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -