Kmac068976.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010002797.1:63503-65363[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-12 2.5e-10 42.8 0.1 1 44 18 61 18 62 0.93
Sequence Information
- Coding Sequence
- ATGCCTAACGTGTATAAAAGAAAGCAAGGAGCTCGTCCGAGAGGTGAATGGACAGAGGCTAATTTACAAGAAGCTGTTAATGCAGTAAGATCTGGTGCAATGAGAATTTCTGAAGCATCATCAAGCTTCGATATTCCTAAAACGACACTTTTACGAAGAATTaggaacaataatttaaaaaaaaggactaGATTGGGACCAGACTCAAGCCTTGGTGAAGAGGCAGAAAGAAAAATTGCGCTTCATGtaaaaaagctacaaaaaaatggCTTCGCTCCTGCTAGAGATGAGGTTCGCATGATGGCATACAAACTGGCGGAGAAAATGCAGATTGAACATAAATTTAATAGAGAACATGaaaaagctGGATATAGATGGTTGCAGTCTTTTATGAGACGCAATCCCGATATTGTTGTTCGAAAAGGCGAAAATGTGTCAGCTGCCCGAGCCGTAGCCATGTCCAGAGATCTGGCGGagggttattttgatttactaaacAGAATATTAACCGAAAATGATCTCCATGGGAAACCGGGTTGTGTATACAACGCTGACGAAACTGGCCTTCAACTTAATACTAGGGCTGGTAATGTTCTTGCCGAAAAGGGATCAAAATCTGTACCTTTGATTAGCTCTGGTGAAAAAGGTGAAACCATAAGTGTACTGGCATGCTGTAATGCAGAAGGGGTATTTATTcctccattttcaatttttaaaggaaaGAACAAGAAAGACGAATTTCTGGATGGAATGCCTCCAGGATCGGCCATTTGTATGTCGGAAAAATCTGCCTACGTAAACTCTGAGATATTCTTCCATTGGTTGCAGACGCATTTCGTGCCAAGAAAAATGCCCGGAAAAGTTGTTTTAATCTTGGATGGACACACGGCGCATACAACTAATTTGGAGATGCTTGAATATGCTACACAACATGAcattattcttttatgtttgcCAGCACACACCACACACTATTTACAGCCTTTGGATCGTGCTTTCTTCAAATCATTAAAGACTCATTATTACAATGCATGCAACCGTTTCGTAAAATGTAACGCATCTCGTAAATTAAGTAGGCTGCAATTTGGGAAATTACTAGGTGAATCCTGGAATAAGGCAGCAACCGTTGAAAATGCAGTATCAGCGTTTCGTTCAACTGGAATAGCCCCATTCAACCCTTTTGTGCTTCCAGATTATGCTTTTATATACAATCCGGTGCCTAATGCTGCAGAAGATATTCCACAAGATGTAACAGGAGAACAAATTATAAACGCCATTGATCAAGCAGAAGCAAGCACATCTAGAACACGCGTTGAAGAAGAACTTGCTGATGAGGAAGAAACACCTGGAAAGATGTTGAACACCATATCGCCCATAACGGAAACTGTTGTAAAAGTGAGAAAACGTGCCACAGGGGTTGCTGCTGTACTAAATTCAATGGAgaatatagaaaaaagaaaacaaatcaaCCAATCTAAAcaagaaagagaaaaaagaaaaatgcagaagAAAGAAACGAAAAACAAGTCTGTTAAAGGTAAAGGAAAGCGTAAACGGGCGCCTTCTTTTGAGACCGAGTCAGAGGAGGAAGAAGAGAAAGAATTAATTGATGCAGACGACAGTGGAGATGACTTGGAAGACTATGAGAACGAATGTGCGGGATGTAAAGAGGACTACCgagttaccaaaaaaaaagaagactGGATTAAGTGCCTCATATGTGGGCACTGGTTACACGAGGGATGTACATCCTTCTTAAATTTATGTCTAACATGTGGAAAGCATAGCGCAGGCAAGAAATAG
- Protein Sequence
- MPNVYKRKQGARPRGEWTEANLQEAVNAVRSGAMRISEASSSFDIPKTTLLRRIRNNNLKKRTRLGPDSSLGEEAERKIALHVKKLQKNGFAPARDEVRMMAYKLAEKMQIEHKFNREHEKAGYRWLQSFMRRNPDIVVRKGENVSAARAVAMSRDLAEGYFDLLNRILTENDLHGKPGCVYNADETGLQLNTRAGNVLAEKGSKSVPLISSGEKGETISVLACCNAEGVFIPPFSIFKGKNKKDEFLDGMPPGSAICMSEKSAYVNSEIFFHWLQTHFVPRKMPGKVVLILDGHTAHTTNLEMLEYATQHDIILLCLPAHTTHYLQPLDRAFFKSLKTHYYNACNRFVKCNASRKLSRLQFGKLLGESWNKAATVENAVSAFRSTGIAPFNPFVLPDYAFIYNPVPNAAEDIPQDVTGEQIINAIDQAEASTSRTRVEEELADEEETPGKMLNTISPITETVVKVRKRATGVAAVLNSMENIEKRKQINQSKQEREKRKMQKKETKNKSVKGKGKRKRAPSFETESEEEEEKELIDADDSGDDLEDYENECAGCKEDYRVTKKKEDWIKCLICGHWLHEGCTSFLNLCLTCGKHSAGKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00845830;
- 90% Identity
- iTF_00845813; iTF_00845814; iTF_00845818; iTF_00845830; iTF_00845826; iTF_00845828; iTF_00846059; iTF_00845810; iTF_00845811; iTF_00845815; iTF_00845819; iTF_00845820; iTF_00845821; iTF_00845822; iTF_00845824; iTF_00845851;
- 80% Identity
- -