Kmac037215.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- clz9
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010001144.1:220911-230860[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-05 0.0062 19.1 0.0 5 43 2 39 1 40 0.94 2 2 8.5e-06 0.00059 22.4 0.0 4 37 248 281 247 288 0.91
Sequence Information
- Coding Sequence
- atgttaaaattggcACTGGAATCTATAGCAAACGGTATGCCTGTAAAAACAGCAAGTAAAACTTTTAACATTCGGAAAACTACTTTGCATTACAAGAAAACCGGAAAATATCCTGTGGATTGTTCACCAGGTGCTCTTACAGTTTTAACGTCAGAAGACAACATTAGTGAAATGGATAATTCACGTAGCGAAAATGGGATTTCCAGAAAGAAGGTTCTAGCACTAAAGGTTAGCAAAACTGTTTACAGCCACACAAACAGCGATGAAAAAGAATGCATTACAGTTTTGGTAACAGCCAACGCTGCCGGTGATGTAGCTCCTCAAATGATAATGCATGCTTATGAGCGAATTCCACAAGCTATTGTTATTTTAATGCCCGATGGATGGAAATTTGGCAAGTCAGAATCGGGATGGATGACCGGTGAAAGTTTTTTTGAGTATATGTGCAACGGTTTTTATCCGTGGACTATCAAAAATGGGATTCTTTTGCGAATAATTTTTTACGTGGATGGTCACAAATCGCATTTGACACAGCCATTAAGCGAATTttgttcacaaaaaaatattgtcttgATTAACCTCTTACCAAATTCTACGCATATGCTCCAACCGATGGACGTCGTGGTTTTCCGGCCCCTAAAAAACGGTTGGAAAAAGGCAACCGAGCAATTTAAAatcgaatattccactcatgtacaaattttcccatcctccaAGAAAAGACAACAGTGGGATTGCCATGACATGCAATGGGCTATGCAGAGCATACAAAACCATGATATGGGCTTCAAGCTGGCTGCAAGTACCTTCAATGTACCTAAAACCACTTTACGAAGGCGACTGGCTAAGCAGGACAGTTCTAAGGGTTATTTGGGAGGACGAAGAGCAACTTTCTCAGCAGCCATTGAAGAGGAGGTTGTAGACAATATGATTGATATGGAAACGCGATTTTTCGGACTAACTTCTAAAGATTTGCGGAGATTGGTTTTGAACAGTGATGAATCTTCAAATTCTGGAGATGACCCAGTTCTGGATGATGATTCGGATATGGACGCAGATGATAACGATGAAGATATAGACTGTTTGTCTTGTGGTGGTTTATTTGTAATCAAAAAACCGAAAAATAAAGAGCAGGAGAAAGCTGGTTCGAGTTCTCCACAAACGTCTTGTTCTTCAGAGAAACAGTCATATGCTCACAGGTTTAGAGCAGAATGGCTGACTGAGTTTCCGTGGATAAAATTACTCCACCATAATACGGGGATAAAGTATGCGCTGTATATAACCAATCAGTGGAGGGTGGAACAGCTGATCttttaa
- Protein Sequence
- MLKLALESIANGMPVKTASKTFNIRKTTLHYKKTGKYPVDCSPGALTVLTSEDNISEMDNSRSENGISRKKVLALKVSKTVYSHTNSDEKECITVLVTANAAGDVAPQMIMHAYERIPQAIVILMPDGWKFGKSESGWMTGESFFEYMCNGFYPWTIKNGILLRIIFYVDGHKSHLTQPLSEFCSQKNIVLINLLPNSTHMLQPMDVVVFRPLKNGWKKATEQFKIEYSTHVQIFPSSKKRQQWDCHDMQWAMQSIQNHDMGFKLAASTFNVPKTTLRRRLAKQDSSKGYLGGRRATFSAAIEEEVVDNMIDMETRFFGLTSKDLRRLVLNSDESSNSGDDPVLDDDSDMDADDNDEDIDCLSCGGLFVIKKPKNKEQEKAGSSSPQTSCSSEKQSYAHRFRAEWLTEFPWIKLLHHNTGIKYALYITNQWRVEQLIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -