Kmac082203.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010003550.1:8468-9264[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-12 8.3e-11 44.3 0.0 1 41 18 58 18 62 0.93
Sequence Information
- Coding Sequence
- ATGCCTAACGTGTATAAAAGAAAGCAAGGAGCTCGTCCGAGAGGTGAATGGACAGAGGCTAATTTACAAGAAGCTGTTAATGCAGTAAGATCTGGTGCAATGAGAATTTCTGAAGCATCATCAAACTTCGATATTCCTAAAACGACACTTTTACGAAGAATTaggaacaataatttaaaaaaaaaggaAGATGAGGTTCGCATGATGGCATACAAACTGGCGGAGAAAATGCAGATTGAACATAAATTTAATAGAGAACATGaaaaagctGGATATAGATGGTTGCAGTCTTTTATGAGACGCAATCCCGATATTGTTGTTCGAAAAGGCGAAAATGTGTCAGCTGCCCGAGCCGTAGCCATGTCCAGAGATCTGGTGGagggttattttgatttactaaacAGAATATTAACCGAAAATGATCTCCATGGGAAACCGGGTTGTGTATACAACGCTGACGAAACTGGCCTTCAACTTAATACTAGGGCTGGTAATGTTCTTGCCGAAAAGGGATCAAAATCTGTACCTTTGATTAGCTCTGGTGAAAAAGGTGAAACCATAAGTGTACTGGCATGCTGTAATGCAGAAGGGGTATTTATTcctccattttcaatttttaaaggaaaGGACAAGAAAGACTAA
- Protein Sequence
- MPNVYKRKQGARPRGEWTEANLQEAVNAVRSGAMRISEASSNFDIPKTTLLRRIRNNNLKKKEDEVRMMAYKLAEKMQIEHKFNREHEKAGYRWLQSFMRRNPDIVVRKGENVSAARAVAMSRDLVEGYFDLLNRILTENDLHGKPGCVYNADETGLQLNTRAGNVLAEKGSKSVPLISSGEKGETISVLACCNAEGVFIPPFSIFKGKDKKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00845789; iTF_00845792;
- 90% Identity
- iTF_00845789;
- 80% Identity
- -