Kmac069801.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- -
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010002816.1:169964-174582[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-06 0.00038 23.0 0.1 1 39 15 54 15 58 0.92 2 2 5.9e-06 0.00041 22.9 0.1 4 39 762 797 759 801 0.93
Sequence Information
- Coding Sequence
- atGGTCAGAAACTATGTTAAGAAACGAAATCAACCCGAGGTTTCCGAAGAAACAATCCAAACGGCTGTTTCAAATGTAATTGAAAATCATATGTCCATACGAAATGCGGCTAGCTTATTTAATGCGAAAAAATCAACACTCCATGACCGAGTTAAAAAAGCCAAGAGTCAAAATGCCCTTTCTGATTCTGGAAATGAAAGTGATGAGAGATCAGGTCAGAGTTCAGGCCTCGGTTCAGACTTATCAAAATATGCTACGCGGCAAGTATTTTCGGTAAACGAAGAAAATGAACTGGAATCATATCTTAAGCAATCGTCGCAAATTTTATATGGTTTGACATATCAGGCAACTCGCAAATTGGCATTTGAATATGCACTTAAATTGGGAAAAACATTTCCTGTAAAGTGGAAACTAAACGAAATGGCTGGCGTCGAATGGATGCGGTCATTTATGAAGCGTCATCCAAGACTATCATTGAGAAAACCCGAAAACACCAGTGTTGCACGGGCGTCAGCTTTCAATGAACACAATgttgaagaattttttaaaaattattcgcaGGTTCAAAATAAATACAAGTTTGTTCCTAGTCGTATTTGGAATACGGATGACACCGGTATATCAACAGTCATTCAGGCACCTAAAGTGATTGCAGAAACTGGCAAAAGAGTTGTTGGTCAATGTGTTTCTGCAGAAAGGGGCACATTAGTTACGTTTTGCGGCATTGTTTCTGCTACAGGTAGTACAATCCCTCCAATGTATATATATCCCCGCATtcgaatgaaaaataattttttaaatggttctGTAGTTGGTGCCATAGGTTACGGGTCTAAGTCAGGGTGGATGACTGcttcattatttgttaaattattagAACACATTAAAAACCACACTCAGAGCAGTCCAATGAATCCCATACTTTTGTTGATGGATAACCAGGAGACTCATGTGTCAGTTGAGGCTATCAATTATTCCCGAGGACATGGTATAGTGCTGTTATCTTTCCCACCACACTGTACGCACAAGATGGAACTGTTAGATAAGGCAGTGTACGGACCATTTAAGCAAAAATGCAAAGTATCTTTTAACGATTACATCTTAAGCCACCCCGGAACACCTATAACAATATATGACATTGCTAAATTGACTTCGGAACCTTACTTACAAAGTTTTACGCCTAAAAACATTATTAGCGGTTTTTCAAGCACTGGTCTGTGGCCCATCAACAGACTTATTTTTTCAGATACAGATTTCTTTGGAGCCTACGCTACAGATCGGCCTAACCCACAAACTGAAGGAAATGAAGATCATAAAGAACCTGACAATATTATAGATCACAGTTGTGTATCACAGTCGAACAACCAGGGCGTACCGTATGCTATCACATCTCCATCTGAACATGACAATATGGATATTTATCAGCCGTCTACATCTGCATGTAACCATCATTTATACACCGCTTCTGGAAACGAAGATGCAACAGCAATGATTCGATCAATAGTTGATGAAATTGTGCATCAAGCAACAAAACCGTCCATCAATATTGTTTCAATGCAAATCTTGAAGCCATCAGATATAAAACCGTTCCCCAAAGCACCGCCCCGAAAAACGAATAGAAAATCACGTCTAGGAAAATCAAGAATATATACAAGCACGCCAGAGAAAACTCGAATCGAAGAATTAGAAGAAATCAGGAGACTGAAGTTAGAGAAATCTGAAACcaagaaaaagttaataataaacgaaacaaacactcaaaaactcaaaaatagcAGATCCACAAGAAACCAGAATATCAAAgagaaacaaaataagaaaaaaattagaaaggcaGTGAAAAGAGGCAAAGAAAGTGACACATCTTCAGATTCGGATCCCGAATTATTTAAAACCatagaaaaaaagaacaaatttctCGACTCTTCATCTGACTCGGATATTGATATGGAATCTAATTGCGATGAATTCGCTAAACTTCTAgATCATGAGAAGATTTTATGCGGCGATTATGTTCTGGTAAAATTTCCCACAAAAAGGACAGTTGTTTATTACGTAGGTCAAGTCATAGATCTTGCAGAATACGgcgaatttgttgtaaaatatttaagacaTTCACGCAACCGATTCCACTTTCCCACTGTGGATGATATTTCAACCATCCCAAGATCTGACATAGAGGCAAAACTGCCCACGCCCACTTCTGTTGCTGGGAATGTTCAAATGCCAAGAAAATATGTTCGAATACAAAATAGAAAGCCACGAGCTACCTGGTCAGAAATTGATTTGGCGACAGCGATccaaaaaataagaagaaaagaaaTTGGGTCTAATGAAGCAAGCAGAATTTATCAGATTCCTTCCCGTACAATTCGAAGACGCATGCAAACTATGAATCTTCAGAAAAGTTCGTTAGGAAAACCACCCACCCTAGGTACCGAAAATGAAATTCGGTTGGTGAATCATATTAAAAAGCTACCATCATCGGGGTTTGCTCCTACTATCTCAACTGTACGTTCAATTGCATatagttttgcaaaaaaattaggtttAGAACCTAAGAGTGAAGGGCTATCTCTGGCACGAGCCAAGGGAATGAATAGGGAAGAAGTAAATGACTTTTATGAGTTGTTTAGGAACACAATGGAAAAATATGACTTAATGTATAAACCACGTTCTATATTTAATATGGATGAAAGTGGCATCCAGATTAATAATAAAGCTGATAAAGTTGTGGCTCAAAAGGAAAGCAAATGCGTTCATGTACTTACATCCAAAGAGAAGGGAGAAAACATATCAATAATTGCCTGTGCTAATGCAGAAGGATTTTTCCTGCCgcatgttttaattttgaaaggtgTTCGAAAAAATATGTCGGCTTTGGAAGAAATGCCTCCAAGTTCTGATTTATATATGAATAAACAATCTTCGTATATAAACACCGAATTATTTATCAAatag
- Protein Sequence
- MVRNYVKKRNQPEVSEETIQTAVSNVIENHMSIRNAASLFNAKKSTLHDRVKKAKSQNALSDSGNESDERSGQSSGLGSDLSKYATRQVFSVNEENELESYLKQSSQILYGLTYQATRKLAFEYALKLGKTFPVKWKLNEMAGVEWMRSFMKRHPRLSLRKPENTSVARASAFNEHNVEEFFKNYSQVQNKYKFVPSRIWNTDDTGISTVIQAPKVIAETGKRVVGQCVSAERGTLVTFCGIVSATGSTIPPMYIYPRIRMKNNFLNGSVVGAIGYGSKSGWMTASLFVKLLEHIKNHTQSSPMNPILLLMDNQETHVSVEAINYSRGHGIVLLSFPPHCTHKMELLDKAVYGPFKQKCKVSFNDYILSHPGTPITIYDIAKLTSEPYLQSFTPKNIISGFSSTGLWPINRLIFSDTDFFGAYATDRPNPQTEGNEDHKEPDNIIDHSCVSQSNNQGVPYAITSPSEHDNMDIYQPSTSACNHHLYTASGNEDATAMIRSIVDEIVHQATKPSINIVSMQILKPSDIKPFPKAPPRKTNRKSRLGKSRIYTSTPEKTRIEELEEIRRLKLEKSETKKKLIINETNTQKLKNSRSTRNQNIKEKQNKKKIRKAVKRGKESDTSSDSDPELFKTIEKKNKFLDSSSDSDIDMESNCDEFAKLLDHEKILCGDYVLVKFPTKRTVVYYVGQVIDLAEYGEFVVKYLRHSRNRFHFPTVDDISTIPRSDIEAKLPTPTSVAGNVQMPRKYVRIQNRKPRATWSEIDLATAIQKIRRKEIGSNEASRIYQIPSRTIRRRMQTMNLQKSSLGKPPTLGTENEIRLVNHIKKLPSSGFAPTISTVRSIAYSFAKKLGLEPKSEGLSLARAKGMNREEVNDFYELFRNTMEKYDLMYKPRSIFNMDESGIQINNKADKVVAQKESKCVHVLTSKEKGENISIIACANAEGFFLPHVLILKGVRKNMSALEEMPPSSDLYMNKQSSYINTELFIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -