Basic Information

Gene Symbol
ct
Assembly
GCA_030620095.1
Location
JAUTXW010002880.1:2206717-2243717[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.2e-28 2.6e-23 84.7 0.0 2 72 303 374 302 379 0.95
2 3 2.4e-31 8.9e-27 95.8 0.0 3 76 708 782 706 785 0.95
3 3 2e-30 7.5e-26 92.9 0.0 3 75 919 992 917 996 0.95

Sequence Information

Coding Sequence
ATGGCGGAGaataaaaatcaaataaatcAACTATTAGAAGAAGTACAGAGACTGCAAAGCTGCATAAGCAAAATTCAGGAATCATCTATAGCCCAAATCAGAAGACTAGAAGAGCAACTTGAACAAAAAAGACAACACATAGTAAGGTTAGAGACTAAGCTAGACGTCCAAAAAGACTACGAAGAACTGAAACGACAACTCTCCATACTGAAATCGGACTTGGTGAATAACCCCCAATGCAAAGACATTGAACTTCTCCTagaaaaaaccaaaattcaagtTCAAGAACACAGGGACAAAAGTCCTTCAAGAGAAAGTGAAGGGGTGACGGATCATCAGTCGACACTCCAAACTCCCACAATACCAATTTCCCCACCCTCCAGTCTCCCGCATCCCTTTCAAAATGTAGATACGTTCGGCAGTCTTTTGGGTGAGGAGATAGTATCCTCGTGGAGAAAAAACATTGAATGTCACCAAAAATCACCCGCTTTACCTTCTTCAGATGGTTTGGTGAAGAGCACGACGCCCCTCCTTGAAAACAATGCGGAAAAAAGCAGTACTGCATCCACGCCTCAGCCGATAGACACCACGGGGCAGCACAGTCCGAACGAGAACCTGATGAATGGTAATCCCAAGAGCCCGCATGAAGATAACAATAACCATAATAATCATAACAACAACATTCCTCTTCCGGCGACATTTGTGAATAACTTCTTGAGATCCGAAGATTCACTGAAGAGCCCTTATAGGTTCGAGGATCACCGGTCCCCCTTTAAGTTTGCTGAAGACCTTGGCATGGCACCTGGATCTATGGTTGGGAGATTAGGGGAGAGTCTCATACCGAAAGGAGATCCTATGGAGGCGAGACTACAAGAAATGTTGAGATATAATATGGACAAATATGCGTCACAGAATTTAGACACTCTTCATATAGCTCGTAGGGTTAGGGAACTGTTATCAATTCATAATATTGGCCAAAGATTGTTTGCGAAGTACGTCCTAGGACTTTCCCAAGGGACCGTGTCCGAACTGCTTTCGAAACCTAAGCCCTGGGACAAGTTAACGGAAAAGGGTCGAGACAGTTATCGGAAAATGCATGCTTGGGCTTGTGACGAAAACGCCATTATGCTGTTGAAGAGTTTAATTCCAAAAAAAGATAATTTTTCATCCTCAGGAAAAGAAGGGTCTCTGCCCTTTGGTCGACCCGAATCTGACCTGACTGAAGAAAGGATCGCTCATATTCTAAACGAAGCAAATCAATTCACTCACATCAAAACAGAATCAGATACGCACAGCAACGAAGATTCTAAATCGCCCCACGGTTGTAGCAGTCCATTTTCCAAAGATTCTTCCTTAAATAAAAGGTTgaagaaatatgaaaatgatgATATATCTCAAGAAAAAGTAGTACGAATTTACCAAGAAGAGTTAGCTAAACTAATGGGTCGGAGAATGGACGACATGAGGAGTCCGAGGGAAGGATTTCCACAGGGTATGTTCCTCCCCCAATTCTTTAGTAATGCCCCGATGGACCGTTCTGATGAAATCAGAATGGCTTTGGACGCTTACCACCGCGAAATAGCGAAGCTCAATCAAAACCAACAGTCTGCACAAATGCCTTTAGGTCTTCTGGCACTTCAACAACAAGCTTTGGCTCAACATCAacaaaatcaacaacaaaatcaGCAGTCGTTGCAAGCAGGTCAAGGGGGTCAAACAATGGGCCATCAGAGCTCCAATGGTGGTGTCCAGGATCTATCTCTCCCAAAAGACAAAATGAAGCTGATGAACGGTATGGATGATGGCAAGGACAAAGACGACGACTCCATGTCTAGACATTCCGGGAGCGCTTTTAGTCTAGTCAGACCGAAGATCGAACCTGGTACAGGAGCAAGTGGAAACAGTACTGCATCTAGTCCATTAGGAAATGCTATATTGCCTCCGATGACTCCAACTAGTGAAGATTTCACCGCATCAGCAGCAGCATCGCCTCTACAAAGAATGGCTTCAATCACAAATTCCTTGATCTCACAGCCTCCAACTCAACCTCATCACACTAGTACTCAACGCcctcttaaggccgttttacctCCCATTACTCAGCAGCAATTCGATCTCTACAATAACTTAAATACTGAAGACATTGTCAAAAAgGTTAAGGAACAACTTAGCCAGTATTCCATATCCCAACGACTCTTTGGAGAAAGCGTATTAGGCCTTAGTCAAGGCTCCGTAAGTGATCTTTTAGCTAGGCCAAAGCCGTGGCATATGTTAACTCAGAAGGGCCGGGAACCATTCATAAGAATGAAGATGTTCTTAGAAGACGGTGATGCGGTACACAAGTTGGTAGCCAGCCAATACAAAATTGCACCTGAAAAGTTAATGCGGACTGGTGGATATGGCAACGCTTGTGCAACGCCACTCTCTAAACCGACCCTTCCTCCGAATCCAAAAATGCTATCAGAAGCTGCAGGATTACTTTCGAAAATTCAACAAGACTCTCAAAACCTGTTACCAGCATCATTACAACTAGGTCCTCCACAAGTAAGCCAACCGCAACCTCCCCCGCTAGGTCCACCAGGCCTCCCGCCGCACCACGCCATAGCTTTGCAAAATCAAGAACTTCTTAAGAAACAGCAACAAAGTATGCAAGGAGGTCATGGTATTTCTACACATTCACCTATGGGTCACCAAGGTATGAGAACCATGCATCAACACATGAGTCCCAGCGTCTACGAAATGGCTGCTCTAACTCAAGATTTGGACACTCAAGtgataacaacaaaaataaaggaaGCTCTGTTGGCTAATAATATTGGACAAAAGATCTTCGGTGAAGCAGTGCTAGGGCTGTCTCAAGGCTCCGTAAGTGAATTACTATCTAAACCTAAACCCTGGCATATGCTATCCATCAAGGGACGAGAACCTTTTATTCGTATGCAGCTATGGCTTCAAGACACGCATAATGTAGATAGATTACAAGCCCTAAAAAACGAAAGACGAGAAGCTAACAAGAGACGACGCAGCTCTGGTCCTGGCCACGACAATTCCAGCGACACCTCGAGTAATGATACTTCTGAATTCTATCACTCAAACAGTCCAGGTCCTCAAGGACCACCTAACGCCAAAAAACAACGAGTACTCTTTAGTGAGGAACAAAAAGAGGCACTGAGACTGGCTTTCGCATTGGATCCTTACCCTAATGTGGCAACCATTGAGTTTCTGGCACAAGAGTTGAGTTTAAGCAGCAGAACGATTACGAACtgGTTCCATAATCACCGCATGAGACTAAAACAGCAAGTTCCACACGGCATGCCATCAGACATTCCTCCTCGTGATCAGAACTCGCAGCAACCTTTTGACCCTGTGCAATTCAGACTGTTACTAAACCAAAGACTCATGGAGCTAAGTAAAGAAAGGATGGGACTTTCAGGTGTACCTCTTCCTTATCCACCATATCTTGCTGCAAATCCCAGCCTAGCAGCGTTAATATCGAGAGGACTGTTACCTACAGGAGATCTTGGTGATCTTTCTGCCCTCAACAACGCTGTTAAAGAGCAAATGAGTGGTCTGGACCTAAGCATGACCTCACTTAAACGTGAACCTACGGAATTCGAAGATGAGGATGATGTTGAATCGAACGTTGGGTCTGAAGATTCGAATATATCTGGCAGTTTGCAAGACGACGCAAAAAATGAGGCGGGCAAAGAAGCAAATGTTTCTAGCGGGAATCAAAACCAGGGGAGGTCTTCTAGGCGGAAACCGGCAGCACCAATGTGGGTAAATCCGCACTGGGAAGAAGAAAAAAATTCCCAAAGTCAAGAAAAAGGCCAAAGTAATCAGGATGAAGTCATTATCAATGGGGTCTGTGTAATGCAAACTGAAGATAACTACACACCCCGCCGCCCCTCCACTGAGGAGACGATTCGAGTTGAACCTCAGGCAGTGATGGACCGATACGATGATGACCGAAGTGATACTAGCAGTATAAGTAACGAAGGAAATCACGATCAAACCCACGAAAGTGAGCGAGAAGAGAACAGGCATGAAGCTGACCAAGAGGATGGTGGGAGTCACGTAGAGGGTACTGAAGGCGATAGAGAAGACAGTGAAAGCAAAGATGTTAAAACAGAAAATGAAGACGAAAGGTGGGAATATTGA
Protein Sequence
MAENKNQINQLLEEVQRLQSCISKIQESSIAQIRRLEEQLEQKRQHIVRLETKLDVQKDYEELKRQLSILKSDLVNNPQCKDIELLLEKTKIQVQEHRDKSPSRESEGVTDHQSTLQTPTIPISPPSSLPHPFQNVDTFGSLLGEEIVSSWRKNIECHQKSPALPSSDGLVKSTTPLLENNAEKSSTASTPQPIDTTGQHSPNENLMNGNPKSPHEDNNNHNNHNNNIPLPATFVNNFLRSEDSLKSPYRFEDHRSPFKFAEDLGMAPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAIMLLKSLIPKKDNFSSSGKEGSLPFGRPESDLTEERIAHILNEANQFTHIKTESDTHSNEDSKSPHGCSSPFSKDSSLNKRLKKYENDDISQEKVVRIYQEELAKLMGRRMDDMRSPREGFPQGMFLPQFFSNAPMDRSDEIRMALDAYHREIAKLNQNQQSAQMPLGLLALQQQALAQHQQNQQQNQQSLQAGQGGQTMGHQSSNGGVQDLSLPKDKMKLMNGMDDGKDKDDDSMSRHSGSAFSLVRPKIEPGTGASGNSTASSPLGNAILPPMTPTSEDFTASAAASPLQRMASITNSLISQPPTQPHHTSTQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDGDAVHKLVASQYKIAPEKLMRTGGYGNACATPLSKPTLPPNPKMLSEAAGLLSKIQQDSQNLLPASLQLGPPQVSQPQPPPLGPPGLPPHHAIALQNQELLKKQQQSMQGGHGISTHSPMGHQGMRTMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLQDTHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTSEFYHSNSPGPQGPPNAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAQELSLSSRTITNWFHNHRMRLKQQVPHGMPSDIPPRDQNSQQPFDPVQFRLLLNQRLMELSKERMGLSGVPLPYPPYLAANPSLAALISRGLLPTGDLGDLSALNNAVKEQMSGLDLSMTSLKREPTEFEDEDDVESNVGSEDSNISGSLQDDAKNEAGKEANVSSGNQNQGRSSRRKPAAPMWVNPHWEEEKNSQSQEKGQSNQDEVIINGVCVMQTEDNYTPRRPSTEETIRVEPQAVMDRYDDDRSDTSSISNEGNHDQTHESEREENRHEADQEDGGSHVEGTEGDREDSESKDVKTENEDERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00443834;
90% Identity
iTF_00845740;
80% Identity
iTF_00845740;