Basic Information

Gene Symbol
-
Assembly
GCA_030620095.1
Location
JAUTXW010001314.1:2031254-2053382[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-23 3e-19 72.1 0.0 1 89 118 204 118 204 0.93

Sequence Information

Coding Sequence
ATGAAACGTCTCGAAGATGTTGAAAATATGTATCTCAAGTATAAGATAGTAAATGCACTTGGAGGATTTTACATGCAACATCCAAATACTAGGgtGCTGTTCTGTAGGGACACATTCGATTATCCCGAATTGGAAGGTCACGAATTACTATGTAATCACCTAGCTCCCAAATTAAAAGGACGACCTAGAGGAAAACGGAAAAAACGCAGCATTTCACCCATATCGGACAGTAATGAGTCAGAATCGTCAATTACTAACCATTTTACCAGGttcgtGGAAAGATCTAACGGTGTTTGTTCTAACTCCTCACCTGTGGCAACCCGCCGAAGCACGAGATGTCACGAAAATAACGAAAACAAGCAGTTCATGAAAATTTTATCGGCCTTTATGAAAGCCAAACGTTTGCCAATGGGTCGAATTCCATCGCTAGGATATAAGGaatTGAACTTACATGAGTTCTACACAAGGGTCCAAAAGCTTGGTGGCTACGACTGTGTAACTATGAATCGGTTATGGAAATCAATTTTTGACGATATGACAGGTCATTTAAATAGCACAAGTGCAGCTACTATCATACGGAGACACTATGAAAgATTTTTACTGGCCTTTGAACGACACGAAAGGAATGAAGAGGATAAGCCGATTCTTGCAAATGAAAGGCGGAGACTCAAAGACAAGCATGAGGTTGTGCAAGATAATAGTTCCAGTGATTCTTCTGACTCTTGGACTGATACAACGTCAACTTCCACATCTAGTAGTAGTCCTACAATTGGCATTGAAACTAAGgAATCAAGTTTCAGTTCCAGCAAAACATCGTCCTTGCGTAGTATCCGAGTGAAACCAGAAAGGCAAAAAGAAAAGCTCGTCGAAAAATCCAGTactgaaaatcaaaataaacctaTATTAAGTATAAGTAATCAAACTACCTTTGAACAAGTGATTAAATCCGAAGAAACTAAATTTGAACAAGTCGTCAAAACTAAAGTTGAAGACATACTGCCTAAGATTGAAAACACACTGGAAATAATAGCAAAGCCTGTTGAAGAAGAAACAATCAAACTtgatattaaaaccgaaataaaaatagaaactaATGTAGAAGtggaaattaacattaaaaaagacTCAGAAGATCTAAATAATATCAAAGAAGAAGAGGAAAAACCGAAAAGTGAGCCAGACGAAATCAAACCGTCTATACCTGAGGGGACGAAAACTGAAGGCTCAATTCCAGCTGAACCAGTCATGAATGCTATAGCCCCTGTTGTTACGACgattatatctgaaaaaaatatgtcaCCAACAGAAGGAAAGGAAAATATTCCTGTCATTGAAACAGGAGATACTGCCATAATAAACACCACctctaaaaatgtttcatatagtACAAACTCGCCAGAAATTCCGAGAATCGGCTTAGAGATTTTTAAGAGCGATAACGAATCAGCTGTACACGATGTTAAAAGAATAAAgctagacattttaaaagaagGGGGTTTAGAGGTTACCCCGGTCAGATCAGGATCAACGCCTACATCGATTAAAGAATTTCGTCCTTCAGTTATACAACCACCACCAAACAATAATTTTGCAAAACCGGTAATGGCGCCACCTTCACTAATAAGCAACGTCTTGCCAAAAAGAAACCCCGTGTCCTCCTTACCGCCAAGCATAAACATTACACAAATTAAAACAACACCTACTACGCCGGTAAAAGCAGCTAAGCCAGATAATTATCAGTTTGTAAACGGTGCTACTCCACCAAAAGTAGTTCAGTCAAGGTCGATTTACTCTTACTCGGAAAAAACGGTGTATGGGAATCCGAAAGACGTTTTTCAACCTAATATGATGCCGTATGCTCCAAAATCGGTAGTTCCCAATTTGAGACAAGGTGGTAGTGATCCAGTGGATTTATCTCTTACAAGTCCGCAAAAACCTGTTGTTGAAATTATGCCTGTAACTCAGAATTCGACTTCAAATGTTCAGGCATCGTGCAATAGGTCTAGTGTCACTAAAAATTTGTACAAAACGGGCCCTTCTTTGTTAGAGGGGCGAAAATTGGGTCCCAATTTGGAAATCACGTTGGTAGGTCCAAAATCTTCCCAGACTAGTTCGGTAGCGAAACACCCAAACTCGCATAAACGTTCAGGTGCTGAAACTTACGCTCAAAAAATCGCAAAACTAAAATCTGAAGAAATTAGTAGTAGACAGTCGAAGTACAGCGTTCCGCAGATACGTAAAAATAGTGTGGATATACCAGTTCCTAGTCCATTTGTTAAGAGTAGTAGTGTTAGTGTTAGTGCTAGTGCCGGGAAACCAGACGTTAGGCAAGCGCAGTCAGGCCAAAAGCCTGTAGTTCTTCCTTTGCCTCAGACAATGCCGCCTTACCTTTCTACCAGGTTCGCCGCACCTGATAACTCTAATGGGCTCAATCCGTTCCTTCCAATCATGGACTCTTTATATTATCAGGCAGCTTTGCAGAACGTTTATTCGAACCTTTCCAATATGCCGCCCATGTTACCTATTCCAACCCCAGAACAGTTGAAATTTTACGCGGAACTCATGGCACATGGAAGAGTTAATATGCCATTTTCATATCCTGCTGACGGTCATCCATCCACGAATACTAATAAAAAGCCATGA
Protein Sequence
MKRLEDVENMYLKYKIVNALGGFYMQHPNTRVLFCRDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSISPISDSNESESSITNHFTRFVERSNGVCSNSSPVATRRSTRCHENNENKQFMKILSAFMKAKRLPMGRIPSLGYKELNLHEFYTRVQKLGGYDCVTMNRLWKSIFDDMTGHLNSTSAATIIRRHYERFLLAFERHERNEEDKPILANERRRLKDKHEVVQDNSSSDSSDSWTDTTSTSTSSSSPTIGIETKESSFSSSKTSSLRSIRVKPERQKEKLVEKSSTENQNKPILSISNQTTFEQVIKSEETKFEQVVKTKVEDILPKIENTLEIIAKPVEEETIKLDIKTEIKIETNVEVEINIKKDSEDLNNIKEEEEKPKSEPDEIKPSIPEGTKTEGSIPAEPVMNAIAPVVTTIISEKNMSPTEGKENIPVIETGDTAIINTTSKNVSYSTNSPEIPRIGLEIFKSDNESAVHDVKRIKLDILKEGGLEVTPVRSGSTPTSIKEFRPSVIQPPPNNNFAKPVMAPPSLISNVLPKRNPVSSLPPSINITQIKTTPTTPVKAAKPDNYQFVNGATPPKVVQSRSIYSYSEKTVYGNPKDVFQPNMMPYAPKSVVPNLRQGGSDPVDLSLTSPQKPVVEIMPVTQNSTSNVQASCNRSSVTKNLYKTGPSLLEGRKLGPNLEITLVGPKSSQTSSVAKHPNSHKRSGAETYAQKIAKLKSEEISSRQSKYSVPQIRKNSVDIPVPSPFVKSSSVSVSASAGKPDVRQAQSGQKPVVLPLPQTMPPYLSTRFAAPDNSNGLNPFLPIMDSLYYQAALQNVYSNLSNMPPMLPIPTPEQLKFYAELMAHGRVNMPFSYPADGHPSTNTNKKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-