Basic Information

Insect: Kradibia gibbosae
Gene Symbol: stc
Assembly: GCA_018907135.1
Location: JACCHX010000005.1:2790636-2798501[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 3.3e+04 -4.3 1.6 15 19 495 499 494 499 0.81

2 15 0.085 1.4e+03 0.3 0.4 4 10 528 534 527 538 0.83

3 15 6.4e-07 0.011 16.6 13.3 4 18 545 559 543 560 0.93

4 15 1.2 2.1e+04 -3.5 1.3 6 10 586 590 585 590 0.90

5 15 1.4e-05 0.24 12.3 13.4 1 18 596 613 596 614 0.94

6 15 0.22 3.7e+03 -1.1 1.7 1 10 623 632 623 632 0.90

7 15 1e-07 0.0017 19.2 12.5 1 18 652 669 652 670 0.96

8 15 0.59 9.7e+03 -2.4 0.9 5 10 699 704 699 704 0.95

9 15 7.7e-07 0.013 16.4 15.2 4 18 717 731 710 732 0.86

10 15 1.5 2.5e+04 -3.7 2.0 5 10 761 766 761 766 0.93

11 15 0.0019 32 5.5 8.2 1 11 772 782 772 783 0.96

12 15 2.7e-10 4.5e-06 27.4 11.2 1 19 799 817 799 817 0.98

13 15 2 3.3e+04 -6.5 10.0 10 19 864 874 856 874 0.71

14 15 1.7e-05 0.29 12.1 16.7 1 16 910 925 910 936 0.85

15 15 2.3e-06 0.039 14.8 14.1 1 19 942 961 942 961 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	3.3e+04	-4.3	1.6	15	19	495	499	494	499	0.81
2	15	0.085	1.4e+03	0.3	0.4	4	10	528	534	527	538	0.83
3	15	6.4e-07	0.011	16.6	13.3	4	18	545	559	543	560	0.93
4	15	1.2	2.1e+04	-3.5	1.3	6	10	586	590	585	590	0.90
5	15	1.4e-05	0.24	12.3	13.4	1	18	596	613	596	614	0.94
6	15	0.22	3.7e+03	-1.1	1.7	1	10	623	632	623	632	0.90
7	15	1e-07	0.0017	19.2	12.5	1	18	652	669	652	670	0.96
8	15	0.59	9.7e+03	-2.4	0.9	5	10	699	704	699	704	0.95
9	15	7.7e-07	0.013	16.4	15.2	4	18	717	731	710	732	0.86
10	15	1.5	2.5e+04	-3.7	2.0	5	10	761	766	761	766	0.93
11	15	0.0019	32	5.5	8.2	1	11	772	782	772	783	0.96
12	15	2.7e-10	4.5e-06	27.4	11.2	1	19	799	817	799	817	0.98
13	15	2	3.3e+04	-6.5	10.0	10	19	864	874	856	874	0.71
14	15	1.7e-05	0.29	12.1	16.7	1	16	910	925	910	936	0.85
15	15	2.3e-06	0.039	14.8	14.1	1	19	942	961	942	961	0.97

Sequence Information

Coding Sequence: ATGGCAACCTGGGATGGTTCTTATTTGGAACCAGATGGATCAAATTATTATGTCAACCCTAATCAAAATCACACGCAGGGAAATATTTCCACTTGGGATTATTACCTTCCTGACACCAGTAATACAAATGTGCAAAATACAACGCCGTATCCATTAGATTCGACCATGATCTTTGAATCAAGTATGCCCAACTTTTACAATCAGACCGATAGAAAAACCAATCCTCTCCTTATGTCAAATGCAATAGTTACTAATTCGTATCAAAATAAAGGAACGCAAGCTTTTGCCAATAAAATCCATATGGAATTCCCAGAAATGCAGTATAACAATATTAATAGTCAACTTCCATGTTTCTATGAAAATAATGAAACTGTATCATTGCAAATGCCACATTATTACAATAAAAATGTTTTTCAAGACAACTGTAGACAAAATACTAATGGTGAAATTTATCGAGAAACATCTATTGTTGAGCATTCAAATTTACACGCTAATGCCAGCGAATTTGTACCCAATCATAATCAGAGAGATAAGGAAAGTATTATGAATCTAAACAAAAATGAAAAAATAGAAATAAATCAGCAAAATCAAAATTCAGATCAATCATTTAATGTTTTATCCGAAGATAAAGTAATTTGTAATGATAAAAAATTTGAAAATAAACAGGACATTGATAAAAGATGGAGAGATTCACAAAATAGTCAGTATCATAAAAATGATAAAAAAGATTATGGAAAAGGTTTTCATCAAAATAGAAAATATCAAAATCATAATCACACTCATAATAGAAATTTCTTTGATAATAAAGTACATAAAAATCGATCTAAAAAAGATGGTGCAGAGGGTACTGCAGATGAAGTGAATCCAGATAGCGAGCATGAAAAAATAAATAAAGAGTATAAAAATAATTCAAATAGGAGTAATGTATTTAATTCAACATTTGAAACAGACAATGGGCAATATTCTAAGAACTCAAAATCATTTTCAAACACTGGTCACGAAAATAAATATTATAATAGAAAAGAACGATATAACTCTAAAGACTCGGAAGATAGTAAATATGTCCGAGATTGCAATGATTACAAAGATTGTAGAGATAGAAAAAATAGTTACTTTGAAAACAATGCATATAGTAAAACTAATTATCTTCGGGATAGGTATGAAAAAAGAGAGATTAGAAATTCACTTTCAGAAAATCGAAGTAAAGAAAAAACTGATTGGCGGCAAAGGACAAATAATACTGGGAATAAAAATACTCCGTTAAAACGTATTTATCATAAAAAATACGAATTGGATTACGATGCGAGTCAGAGAGAAAGATTGACAGATCAATTGAATCGTGGACATTTAGAATGCTTAGTCTGCTGTGATTCCATTAGACAAGCTGATTACGTGTGGTCGTGTAAGAACTGCTATCACGTTTTCCATTTGAAATGTGTACAAAAGTGGGCGTTGTCATCCAAAGATGAAAGTGGCTGGCGGTGCCCGGCCTGCCAAAACGTCACCGTCGACGTCCCATCCGATTACGAATGCTTTTGCGGCAAGACCCGAATGCCCGATTGGAATAGACGCGACATAGCCCACTCCTGCGGGGAGATCTGCGGCCGGGGCCGCTCCGATCCCAACTGCGTCCACAAGTGCACGTTGCTCTGCCACCCGGGCTCGTGTCCGCCCTGCAACGTGATGATCACCAAGTCTTGCGGCTGCGGAAGGATGTCCCAGACCCAGAGGTGCAGCACCGGCTCCTTGTTACAGTGCAACGAAGTTTGCGATCGGCCGCTTAACTGCGCGGTGCACAAGTGCGAAATAAAGTGCCACCACGGCAGCTGCGAACCCTGCGACAAAAAAATTAAGCAAGTATGTTATTGTGGAAAACACAGCCGTGAAGAAACATGTACTTTGGACTTGCCTACAATGTATTCATGCAAAAATATTTGTGACTCGATACTAGATTGTAATAATCATAAGTGTAAAGAAATTTGTCATCCAGGACAATGTGAATCTTGTGTCTTGAAACCTGATAAAGTGACGGCCTGCTGCTGTGGTCAAACTGATTTGTCTGTTACGAGAAATAGTTGTTTAGAACCTATTCCAACTTGTGATAAAGTGTGTTCCAAAACCTTAAATTGCGGTCAACCAGGTAATCCACACACTTGTCAAATGAAGTGCCACGAGGGCGAATGCCCCCCGTGTGAATTATTCACAAAGGTCAGATGCCGTTGCGGGCACATGGATAAAGAAATCCCTTGCACAGAATTGAAAACAAAGGCCGACGACGCCCGCTGCGAGAAAAAGTGTACAAAAAAGCGATCCTGCGGCAAGCACAAGTGCAATCAAATGTGCTGCATCGAAATCGAGCACATCTGCCCTCTGCTTTGCTTTAAGAATTTGAGCTGCGGCAAACACAAGTGCGAGCAAACTTGTCACAAAGGCAGGTGCATGAGCTGCTGGCGCAGCAGCTTCGACGAGCTCTACTGCGAGTGCGGGGCGGCGGTGATCTACCCGCCGGTGGCCTGCGGCACGCGACGGCCGAGCTGCGTCAAGCCCTGCTCCCGGAGCCACCCCTGCGGCCACGAGGTCCTCCACAACTGCCACAGCGACCCGAGCTGCCCGCCCTGCACGGTCCTCACCCAGAAGTGGTGCTACGGCAACCACGAGCTCCGCAAGGCCGTGGCCTGCTACGTTAACGAGGTCTCCTGCGGGCTGCCCTGCGGCAAGCCCCTCAGCTGCGGCAGGCACAAGTGCATCCAGATCTGCCACCCGGGGGTCTGCGAGAAGCCGGGCTCTGTCTGCTGCCAGCCCTGCACCGCCTCCAGGGAGCTCTGCGGCCACGCCTGCGCGGCCCCCTGCCACGAGGGCAAGTGCCCCGACTCGCCCTGCAAGGAGACCGTCAAGGTCACTTGCCAGTGCGGCCACAGAACCATGTCCCGCGTCTGCGCCGAGAACGCCCGAGAGTACCAGCGGATAACCAGCAGGATCCTAGCCAGCAAGATGGCCGACGTGCAGCTCGGCTGCTCCATCGACCTCGAGGAGGTCTTCGGCCAAGGGGTCAAGAAGCAGAACCAGCTTAAGACCCTCGAGTGCAACGACGAGTGCAAGATCATAGAGAGGAACCGACGCGTGACCCTCGCCCTGCAAATCGAGAATCCGGACCTCTGCGGCAAGCTCATGCCCAGATACAGCGAGAACATGAGGCAGTGGGCCAAGAAGGATCCGGGCTTCTGCCAGATGGTCCACGACAGGCTCACCGAGCTCGTCCAATTGGCCAAGACCTCGAAGCAGAAGTCCCGCAGCTACTCCTTCGACAACATGAACAAGCACAAGAGGCTTTTCGTTCACGAGTCCTGCGAGCACTTCGGCTGCGACAGCCAGTCCTACGACGAGGAGCCCAAGCGCAACATCGTCGCGACCGCAGTGAAGGACAGGTGCTGGCTGCCGAGCTACAGCTTGATGGAAATCTATCAAAAAGAAAACTGTCCGCGCAAAGTACCAGGACCCATACTTAACAAATCTAAAATTGACGTTGCTGAAAGGAACAAAAATACTTTATCGTTGAATTCGAAAAAGAATTTAAGGACGCTCCCAGCGCCGATCTCTCCATCGAGGTCTCCAGAACCAGAAATAGATTACTTCAATTATAAATGTTAA
Protein Sequence: MATWDGSYLEPDGSNYYVNPNQNHTQGNISTWDYYLPDTSNTNVQNTTPYPLDSTMIFESSMPNFYNQTDRKTNPLLMSNAIVTNSYQNKGTQAFANKIHMEFPEMQYNNINSQLPCFYENNETVSLQMPHYYNKNVFQDNCRQNTNGEIYRETSIVEHSNLHANASEFVPNHNQRDKESIMNLNKNEKIEINQQNQNSDQSFNVLSEDKVICNDKKFENKQDIDKRWRDSQNSQYHKNDKKDYGKGFHQNRKYQNHNHTHNRNFFDNKVHKNRSKKDGAEGTADEVNPDSEHEKINKEYKNNSNRSNVFNSTFETDNGQYSKNSKSFSNTGHENKYYNRKERYNSKDSEDSKYVRDCNDYKDCRDRKNSYFENNAYSKTNYLRDRYEKREIRNSLSENRSKEKTDWRQRTNNTGNKNTPLKRIYHKKYELDYDASQRERLTDQLNRGHLECLVCCDSIRQADYVWSCKNCYHVFHLKCVQKWALSSKDESGWRCPACQNVTVDVPSDYECFCGKTRMPDWNRRDIAHSCGEICGRGRSDPNCVHKCTLLCHPGSCPPCNVMITKSCGCGRMSQTQRCSTGSLLQCNEVCDRPLNCAVHKCEIKCHHGSCEPCDKKIKQVCYCGKHSREETCTLDLPTMYSCKNICDSILDCNNHKCKEICHPGQCESCVLKPDKVTACCCGQTDLSVTRNSCLEPIPTCDKVCSKTLNCGQPGNPHTCQMKCHEGECPPCELFTKVRCRCGHMDKEIPCTELKTKADDARCEKKCTKKRSCGKHKCNQMCCIEIEHICPLLCFKNLSCGKHKCEQTCHKGRCMSCWRSSFDELYCECGAAVIYPPVACGTRRPSCVKPCSRSHPCGHEVLHNCHSDPSCPPCTVLTQKWCYGNHELRKAVACYVNEVSCGLPCGKPLSCGRHKCIQICHPGVCEKPGSVCCQPCTASRELCGHACAAPCHEGKCPDSPCKETVKVTCQCGHRTMSRVCAENAREYQRITSRILASKMADVQLGCSIDLEEVFGQGVKKQNQLKTLECNDECKIIERNRRVTLALQIENPDLCGKLMPRYSENMRQWAKKDPGFCQMVHDRLTELVQLAKTSKQKSRSYSFDNMNKHKRLFVHESCEHFGCDSQSYDEEPKRNIVATAVKDRCWLPSYSLMEIYQKENCPRKVPGPILNKSKIDVAERNKNTLSLNSKKNLRTLPAPISPSRSPEPEIDYFNYKC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -