Basic Information

Insect: Kradibia gibbosae
Gene Symbol: ZNF236
Assembly: GCA_018907135.1
Location: JACCHX010000001.1:39173195-39183339[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0022 0.42 12.0 2.2 2 23 48 69 48 69 0.97

2 23 5.3e-06 0.001 20.3 0.4 1 23 90 112 90 112 0.99

3 23 5.1e-05 0.0096 17.2 0.9 1 20 118 137 118 140 0.96

4 23 1.1e-05 0.0021 19.3 1.5 1 23 146 169 146 169 0.97

5 23 0.00036 0.069 14.5 1.9 1 23 178 201 178 201 0.98

6 23 5.3e-08 1e-05 26.6 1.4 1 23 301 323 301 323 0.99

7 23 4e-05 0.0076 17.5 2.8 1 23 329 351 329 351 0.99

8 23 0.0016 0.31 12.4 1.8 1 23 357 379 357 379 0.96

9 23 7.8e-05 0.015 16.6 2.6 1 23 383 405 383 405 0.96

10 23 0.00083 0.16 13.4 4.3 1 23 471 493 471 493 0.98

11 23 4.8e-07 9.1e-05 23.5 0.4 1 23 499 521 499 521 0.98

12 23 3.6e-05 0.0069 17.6 5.1 1 23 527 549 527 549 0.99

13 23 4.4e-05 0.0083 17.4 5.0 1 23 555 577 555 577 0.98

14 23 0.11 20 6.7 2.4 1 23 866 888 866 888 0.91

15 23 0.00085 0.16 13.3 2.7 2 23 895 916 894 916 0.97

16 23 0.00043 0.081 14.3 3.0 1 23 922 944 922 944 0.97

17 23 1.7e-07 3.3e-05 24.9 0.9 2 23 978 999 977 999 0.98

18 23 2.5e-05 0.0047 18.2 1.1 1 23 1005 1027 1005 1027 0.99

19 23 6.1e-06 0.0012 20.1 1.5 1 23 1033 1055 1033 1055 0.98

20 23 0.0026 0.49 11.8 1.4 1 23 1061 1083 1061 1083 0.98

21 23 3.2e-06 0.0006 21.0 1.0 2 23 1292 1313 1292 1313 0.98

22 23 1.9e-07 3.7e-05 24.8 2.7 1 23 1319 1341 1319 1341 0.99

23 23 3.6e-06 0.00069 20.8 4.1 1 23 1347 1370 1347 1370 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0022	0.42	12.0	2.2	2	23	48	69	48	69	0.97
2	23	5.3e-06	0.001	20.3	0.4	1	23	90	112	90	112	0.99
3	23	5.1e-05	0.0096	17.2	0.9	1	20	118	137	118	140	0.96
4	23	1.1e-05	0.0021	19.3	1.5	1	23	146	169	146	169	0.97
5	23	0.00036	0.069	14.5	1.9	1	23	178	201	178	201	0.98
6	23	5.3e-08	1e-05	26.6	1.4	1	23	301	323	301	323	0.99
7	23	4e-05	0.0076	17.5	2.8	1	23	329	351	329	351	0.99
8	23	0.0016	0.31	12.4	1.8	1	23	357	379	357	379	0.96
9	23	7.8e-05	0.015	16.6	2.6	1	23	383	405	383	405	0.96
10	23	0.00083	0.16	13.4	4.3	1	23	471	493	471	493	0.98
11	23	4.8e-07	9.1e-05	23.5	0.4	1	23	499	521	499	521	0.98
12	23	3.6e-05	0.0069	17.6	5.1	1	23	527	549	527	549	0.99
13	23	4.4e-05	0.0083	17.4	5.0	1	23	555	577	555	577	0.98
14	23	0.11	20	6.7	2.4	1	23	866	888	866	888	0.91
15	23	0.00085	0.16	13.3	2.7	2	23	895	916	894	916	0.97
16	23	0.00043	0.081	14.3	3.0	1	23	922	944	922	944	0.97
17	23	1.7e-07	3.3e-05	24.9	0.9	2	23	978	999	977	999	0.98
18	23	2.5e-05	0.0047	18.2	1.1	1	23	1005	1027	1005	1027	0.99
19	23	6.1e-06	0.0012	20.1	1.5	1	23	1033	1055	1033	1055	0.98
20	23	0.0026	0.49	11.8	1.4	1	23	1061	1083	1061	1083	0.98
21	23	3.2e-06	0.0006	21.0	1.0	2	23	1292	1313	1292	1313	0.98
22	23	1.9e-07	3.7e-05	24.8	2.7	1	23	1319	1341	1319	1341	0.99
23	23	3.6e-06	0.00069	20.8	4.1	1	23	1347	1370	1347	1370	0.97

Sequence Information

Coding Sequence: ATGAGTAGCCGAGAGGGCCGAGGGGCTTTCGGCTCCGGATTCTCATCGGGGCCTCTTGAGACCGAGGCGGCGCGCGGAGCCAGCCAGCTGGACGCCCACTCGAAGCTCCACGGCGAAAAATGGTCGGCCGACGACTACAGGAAGTGCAAGCTCTGTCGCAAGCAGTTCACCCAGCCGCTCCTCTACCGCCAACACTTACGCGACCATTACAAGCTGCAGACCAAGACGACGAAACTGACGAGGCGGGGCATCCGGCACAGGACCGTCTACAAATGCAGGCTCTGCCTCAAGGCGTTCGAGAAGCCGAGCCAACTGGTGAGGCACATCAGGGTGCACACCGGCGAGAAGCCTTACAAGTGTAACCTGTGCAATAGAAGTTTCACCCAAAAAGGTTCAGTGAGAATTCACATGTGGCAACACAATGGGATCAGGCCCTACAGTTGTTCATTTTGCCATGCTAAATTTAGCCAAAAAGGCAATCTCAACGCGCATATCCTCAGAGTGCACAGCTCCCAGGAGGGCTCGCCGGTCTACCGCTGCAGCCAGTGTCCGTGCATATTTAAGAAGCTCGGCAGCTTAAACGGCCACATGAAGCGAGTGCACAGCGCCGGCGACAGGACCCTAGACCTCGGCGATGAGCCGGAGAAGGACGCGGAGCCCCCGGAATCCGTGGCCCAACCGAGCCTCGAGGCTCCTACAGCCGGAGCTGGGCTCGGGGCAGCCGAGCTTTCGAAATCCGAATCAGAGATCGACAATCCGCGAAAGCACCCGCAGGACGGCTTCGTCATGACGGACGACAGCGATAAGACGGCGATGGTTACCCTCTTGGACAAGATGTCGAACAACGCCAAGGGAAAGTACATAAAGATTAAACAACGGTTTATAAATAACTCTAGACTTTATGAGTGCACTTTCTGTGATAAAACTTTCAAAAAGCCTTCTGACCTTATGAGGCATTTAAGAATACACACACACGAGAAGCCTTACAAGTGTAAGATATGCAATCGATCGTTTACTTTGAAGTCAACAATGTTGTCGCACGAAAAGACCCACAAAGATTCAACAAAATTCCCATGCAAATTGTGCACAAAATTTTTCACGTCTGAAAAAGAGCTTCTACTTCATGAAAAATTTCACAGCAAAGTACACAAGTGCGGCTTATGCGGCAAAAAGTTCACGAGCTTCGACCAGCTGAAGACGCACTCGGAGATCCATCAGAAGGGCAAAGGTATTGCGGAGGGCGAGGGCTCGGCTACGAATCGCCGCAAGAACCAGTACACCCCGGAGGTGCAGAGCTTGGCACCAAAGGTAATCCTGAAGGAGCCGCTCGTCCTGACGGAGGCAAGCAACGGCCTCTTGCACGCCCAACCCAAGTTTCGCAACGAGGTCGCCCACGGCAAAGGCAGGCCCCACAAGTGCCCCGCGTGTCCCGCGGCCTTCATCAAGCTCAGCCACCTCAAGCAGCACCATCGGAAGCACACCGGCGAACGACCCTACGTCTGTGCCCTATGCGACAGAAAATTTTCAACCAATAGTGCATTAAAGGCCCATCGTCGAATACATGATTTATTGAAACCTTACAAGTGTTACGTTTGCAATAGAAATTTTTCAACTTCAAGTAGCATGAAAAGACACCACATTACACATAGCAATAAACGACCCTACATGTGCCCATATTGTAACAAAACCTTCAAAACAACAGTGAACTGTAGAAAACACATGAAAGTACATAAACAGGAAATCGCCCAGCAGCAACTAGAATCGCAAAAAAAGCAGGAAGAAAATTCAACTTTAATGTCAAATAATGTGCAAATAATAATGCCAGACCAAAACACTAATAATCAAGATATAACATTTCAACCTATTACAAATAATTTTACACAAAACTTAAATGAACAGATCCCAACTATAATCAAAGATAAAGATACAACCTACATGTCTATTACTCCATCGTCACAAAATATTAGCGTAGCAACGCAAAACATACCCCTAGTAGAGAACCCTAACATAAGTGAAACTCAAGCATTACATGCCGATGAGACAGGCACTATTACCCTACCTAACTATTCGGGTAACCAATCGCTTACACCTGAGAGTATTAGAGAAATTGAAGAGACGTTAAATCAGCAATTATTTAGTATCGGAATGAATCTTGTTCTGAACAATACCGTCAGGCAGATAGAGGAGCACAATGACTCCTCTTTAGAAAATCGAGAGCAGCCCATACTAAGCATCATTTATGATAATGGTAAAAATTTGGAATCTTCCATTAGTACAGCCATTAATACAGACGTCTTCTCCTCGCAATACGATGCGTTTGACATTAATCAGATAACATTGCAGGAGGTCAATGGGATCGATTTAGGAATGGCAGAACCTAATGCAACTAATATGGCCAGTATTTTACCTCAATCTATTCAAGAACATACTCATTATAATACACAATTAATTAATCAAGACTTTCAAAATGATTTGGTTCTCAAAGAGAATTACTTAAACAAATCGATCGAAGCATTTGATGAATCGTCAATCATAAACATTGAAAAAGAACAATCATATGTTGAAAATAATAAAGACCTTATTTTAGATACTACTTTTCAATGCCACATGTGCAATATGCAGCAATTTAGCTCAGATGCATTAAAAGAGCATTTAAAATTGCACGAAGAAAATAAAGAAATTTCGTGTACACATTGTTTTTCGAAATTTTCTACAAATGCAGATCTCTCTAAGCACTTGAAAATACATGAAATAGAAGAGACGCACAAATGTTACGAATGTAATGAAGAATTTTCTACAACATTACAATTAAGGAAGCATATAAAAGATCACGTTAAATTTGAACTACAACTTAAAAATTTAACAGACCAAGATGATGCCAGTATTAACTTGGACCCTAAAATGGACGATGAAGCCGATAAGAAGTATAATAAATGTAAATACTGTCCTAAAATTTTCCGTAAACCCAGTGATCTTATCAGACATGTTCGAACACATACCGGTGAGCGACCGTATCAGTGTAACTTTTGCGACAGAAGCTTTGCTGTCAAATATACATTAGATTCGCATTTAAAAATACACGGAGAAGAAAAGTCATTTTATTGTAACATGTGTAACAACATGTTCGCCACAAAAGATAGCCTTAAGATTCACATGAAATCACATATAGGTGACAAGTCATTTAAGTGTCCCCTGTGTGAGATGAAATTTCGCACAATCGGTCATCGAAAGGTTCACCTTGCATCTCACAAGCAGGATTCGGGTTGCCCGCTCGTCGCGATTCCAACAGAGGCGGGTCCTAACGCAGTGGTGGCCGATCCGGAGACCCCGAAGGAGGATCAGATAGTGCGAATCGTGCACACGGAGCCGGTGATGCAGCCACTCCTCGGGCAACCAGCTGACGGCCAACCGCCGATCGACGTCGGCGGGAGCTTTGGGGCCCTCGGAGCTGATCAGATAGTCTTCAACCCCGACGGGGGCATCTCGAGCGATAGCAACGGCTTCCTCGCTCTTGGGGACAACAATCAGCTGGTCGCGAACCTGCAGTTCCTGCTTGCCAACGGCCTCGTCACCATACAGACCGAGGACCCGAGCCTGAGCTCCGAGCTGCCGCTCTCTTCGTCGGGCTGCGCCCAGAACGACTACCTCGCGACGAGCGTCGTGCAGAAGGTTCAGGACGATGTGACTGGCCTTCAGGTGATATTCGCCGGGGAGATGCCGGGGGCGGAGGTGCCCACGTTGGTCAACGAGAGCGACTTCCAGCTCAACGACAGTATGGTTCTGCAGTTGGAGAACATCGACTCGACGGTGCCGGATAAGAGCGAGGAGATGCATCTCAAGCCAGTGAAGACACCGAGCAACATGGCGAGACGGCAGTGTGACATTTGCGGCAAGGCGTTCGCGAAGCCCTGCCAGCTCGAGCGGCACAAACGCATCCATACGGGCGAGCGGCCCTTCAAGTGCGACTTCTGCGGCAAGTCTTTTGCCCAGAAGTCGACCCTCCAAATGCACCAGAAGCGGCACACGGGTGACCGGCCCTACTGCTGCCCCCAGTGCCAGCGCTCCTTTACTCAGAGCGGCAACCTCCAGACCCACCTAAAGCGGAAGCACAAGGTCGACCCCGTGGAGACCAAGCGACTCGCCAAGACTCAGCAGTTCGTCAATTACGACCCGAAGCTCCTCCAGCAGAGCATCGAGGATCCCAGGGTGCTCAACCTCGACGACATGGCCATTGTCGAGCTCTTCAAATGA
Protein Sequence: MSSREGRGAFGSGFSSGPLETEAARGASQLDAHSKLHGEKWSADDYRKCKLCRKQFTQPLLYRQHLRDHYKLQTKTTKLTRRGIRHRTVYKCRLCLKAFEKPSQLVRHIRVHTGEKPYKCNLCNRSFTQKGSVRIHMWQHNGIRPYSCSFCHAKFSQKGNLNAHILRVHSSQEGSPVYRCSQCPCIFKKLGSLNGHMKRVHSAGDRTLDLGDEPEKDAEPPESVAQPSLEAPTAGAGLGAAELSKSESEIDNPRKHPQDGFVMTDDSDKTAMVTLLDKMSNNAKGKYIKIKQRFINNSRLYECTFCDKTFKKPSDLMRHLRIHTHEKPYKCKICNRSFTLKSTMLSHEKTHKDSTKFPCKLCTKFFTSEKELLLHEKFHSKVHKCGLCGKKFTSFDQLKTHSEIHQKGKGIAEGEGSATNRRKNQYTPEVQSLAPKVILKEPLVLTEASNGLLHAQPKFRNEVAHGKGRPHKCPACPAAFIKLSHLKQHHRKHTGERPYVCALCDRKFSTNSALKAHRRIHDLLKPYKCYVCNRNFSTSSSMKRHHITHSNKRPYMCPYCNKTFKTTVNCRKHMKVHKQEIAQQQLESQKKQEENSTLMSNNVQIIMPDQNTNNQDITFQPITNNFTQNLNEQIPTIIKDKDTTYMSITPSSQNISVATQNIPLVENPNISETQALHADETGTITLPNYSGNQSLTPESIREIEETLNQQLFSIGMNLVLNNTVRQIEEHNDSSLENREQPILSIIYDNGKNLESSISTAINTDVFSSQYDAFDINQITLQEVNGIDLGMAEPNATNMASILPQSIQEHTHYNTQLINQDFQNDLVLKENYLNKSIEAFDESSIINIEKEQSYVENNKDLILDTTFQCHMCNMQQFSSDALKEHLKLHEENKEISCTHCFSKFSTNADLSKHLKIHEIEETHKCYECNEEFSTTLQLRKHIKDHVKFELQLKNLTDQDDASINLDPKMDDEADKKYNKCKYCPKIFRKPSDLIRHVRTHTGERPYQCNFCDRSFAVKYTLDSHLKIHGEEKSFYCNMCNNMFATKDSLKIHMKSHIGDKSFKCPLCEMKFRTIGHRKVHLASHKQDSGCPLVAIPTEAGPNAVVADPETPKEDQIVRIVHTEPVMQPLLGQPADGQPPIDVGGSFGALGADQIVFNPDGGISSDSNGFLALGDNNQLVANLQFLLANGLVTIQTEDPSLSSELPLSSSGCAQNDYLATSVVQKVQDDVTGLQVIFAGEMPGAEVPTLVNESDFQLNDSMVLQLENIDSTVPDKSEEMHLKPVKTPSNMARRQCDICGKAFAKPCQLERHKRIHTGERPFKCDFCGKSFAQKSTLQMHQKRHTGDRPYCCPQCQRSFTQSGNLQTHLKRKHKVDPVETKRLAKTQQFVNYDPKLLQQSIEDPRVLNLDDMAIVELFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -